RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 CHODLQ9H9P2 273 aa17.39■□□□□ 0.37
CHD3-204ENST00000439235 SPACA1Q9HBV2 294 aa17.39■□□□□ 0.37
CHD3-204ENST00000439235 ZNF701Q9NV72 531 aaPredicted RBP17.39■□□□□ 0.37
CHD3-204ENST00000439235 DCAF16Q9NXF7 216 aa17.39■□□□□ 0.37
CHD3-204ENST00000439235 IL36RNQ9UBH0 155 aa17.39■□□□□ 0.37
CHD3-204ENST00000439235 RABL2AQ9UBK7 228 aaPredicted RBP17.39■□□□□ 0.37
CHD3-204ENST00000439235 RABL2BQ9UNT1 228 aa17.39■□□□□ 0.37
CHD3-204ENST00000439235 WIPI2Q9Y4P8 454 aa17.39■□□□□ 0.37
CHD3-204ENST00000439235 ROS1P08922 2347 aa17.39■□□□□ 0.37
CHD3-204ENST00000439235 PPIAL4EA0A075B759 164 aa17.38■□□□□ 0.37
CHD3-204ENST00000439235 A0A0A6YYD4 124 aa17.38■□□□□ 0.37
CHD3-204ENST00000439235 TRAV38-1A0A0B4J264 116 aa17.38■□□□□ 0.37
CHD3-204ENST00000439235 OOEPA6NGQ2 149 aa17.38■□□□□ 0.37
CHD3-204ENST00000439235 PPIAL4DF5H284 164 aa17.38■□□□□ 0.37
CHD3-204ENST00000439235 RAB27BO00194 218 aa17.38■□□□□ 0.37
CHD3-204ENST00000439235 XRCC3O43542 346 aa17.38■□□□□ 0.37
CHD3-204ENST00000439235 OR7C1O76099 320 aaPredicted RBP17.38■□□□□ 0.37
CHD3-204ENST00000439235 PPIAL4FP0DN26 164 aa17.38■□□□□ 0.37
CHD3-204ENST00000439235 COL8A2P25067 703 aa17.38■□□□□ 0.37
CHD3-204ENST00000439235 NR4A2P43354 598 aa17.38■□□□□ 0.37
CHD3-204ENST00000439235 LSAMPQ13449 338 aa17.38■□□□□ 0.37
CHD3-204ENST00000439235 ARL6IP1Q15041 203 aa17.38■□□□□ 0.37
CHD3-204ENST00000439235 MICBQ29980 383 aa17.38■□□□□ 0.37
CHD3-204ENST00000439235 TMEM69Q5SWH9 247 aa17.38■□□□□ 0.37
CHD3-204ENST00000439235 BIVMQ86UB2 503 aa17.38■□□□□ 0.37
CHD3-204ENST00000439235 TIMD4Q96H15 378 aa17.38■□□□□ 0.37
CHD3-204ENST00000439235 NEDD4LQ96PU5 975 aa17.38■□□□□ 0.37
CHD3-204ENST00000439235 SEBOXQ9HB31 216 aaPredicted RBP17.38■□□□□ 0.37
CHD3-204ENST00000439235 PLEKHA6Q9Y2H5 1048 aa17.38■□□□□ 0.37
CHD3-204ENST00000439235 PPIAL4AQ9Y536 164 aa17.38■□□□□ 0.37
CHD3-204ENST00000439235 UNC79Q9P2D8 2635 aa17.38■□□□□ 0.37
CHD3-204ENST00000439235 FABP12A6NFH5 140 aa17.37■□□□□ 0.37
CHD3-204ENST00000439235 OR2AT4A6NND4 320 aa17.37■□□□□ 0.37
CHD3-204ENST00000439235 C3orf80F5H4A9 247 aa17.37■□□□□ 0.37
CHD3-204ENST00000439235 SH2D1BO14796 132 aa17.37■□□□□ 0.37
CHD3-204ENST00000439235 PDCD6O75340 191 aa17.37■□□□□ 0.37
CHD3-204ENST00000439235 LY6HO94772 140 aa17.37■□□□□ 0.37
CHD3-204ENST00000439235 TPPPO94811 219 aa17.37■□□□□ 0.37
CHD3-204ENST00000439235 FSTL3O95633 263 aa17.37■□□□□ 0.37
CHD3-204ENST00000439235 HAND1O96004 215 aa17.37■□□□□ 0.37
CHD3-204ENST00000439235 PAX1P15863 534 aa17.37■□□□□ 0.37
CHD3-204ENST00000439235 DUSP1P28562 367 aa17.37■□□□□ 0.37
CHD3-204ENST00000439235 BLVRBP30043 206 aaPredicted RBP17.37■□□□□ 0.37
CHD3-204ENST00000439235 ETV6P41212 452 aa17.37■□□□□ 0.37
CHD3-204ENST00000439235 HOXA4Q00056 320 aaPredicted RBP17.37■□□□□ 0.37
CHD3-204ENST00000439235 KCNJ8Q15842 424 aa17.37■□□□□ 0.37
CHD3-204ENST00000439235 FAM201AQ5SY85 155 aa17.37■□□□□ 0.37
CHD3-204ENST00000439235 CHST4Q8NCG5 386 aa17.37■□□□□ 0.37
CHD3-204ENST00000439235 C15orf40Q8WUR7 153 aa17.37■□□□□ 0.37
CHD3-204ENST00000439235 NRGNQ92686 78 aa17.37■□□□□ 0.37
CHD3-204ENST00000439235 RAB3CQ96E17 227 aa17.37■□□□□ 0.37
CHD3-204ENST00000439235 IFT22Q9H7X7 185 aa17.37■□□□□ 0.37
CHD3-204ENST00000439235 OR14J1Q9UGF5 321 aa17.37■□□□□ 0.37
CHD3-204ENST00000439235 TANC2Q9HCD6 1990 aa17.37■□□□□ 0.37
CHD3-204ENST00000439235 USP9YO00507 2555 aaPredicted RBP17.36■□□□□ 0.37
CHD3-204ENST00000439235 TEX15Q9BXT5 2789 aa17.36■□□□□ 0.37
CHD3-204ENST00000439235 FOXI3A8MTJ6 420 aaPredicted RBP17.36■□□□□ 0.37
CHD3-204ENST00000439235 LYNX1G3V0Z9 82 aa17.36■□□□□ 0.37
CHD3-204ENST00000439235 DEGS1O15121 323 aa17.36■□□□□ 0.37
CHD3-204ENST00000439235 SOCS1O15524 211 aa17.36■□□□□ 0.37
CHD3-204ENST00000439235 NDUFS7O75251 213 aa17.36■□□□□ 0.37
CHD3-204ENST00000439235 IGHV4-39P01824 125 aa17.36■□□□□ 0.37
CHD3-204ENST00000439235 LYNX1P0DP58 116 aa17.36■□□□□ 0.37
CHD3-204ENST00000439235 ZNF44P15621 663 aa17.36■□□□□ 0.37
CHD3-204ENST00000439235 RBMXP38159 391 aaKnown RBP17.36■□□□□ 0.37
CHD3-204ENST00000439235 MNDAP41218 407 aa17.36■□□□□ 0.37
CHD3-204ENST00000439235 TAS2R20P59543 309 aa17.36■□□□□ 0.37
CHD3-204ENST00000439235 KRTAP10-9P60411 292 aa17.36■□□□□ 0.37
CHD3-204ENST00000439235 ZNF45Q02386 682 aa17.36■□□□□ 0.37
CHD3-204ENST00000439235 MOGAT2Q3SYC2 334 aa17.36■□□□□ 0.37
CHD3-204ENST00000439235 SFRP4Q6FHJ7 346 aaPredicted RBP17.36■□□□□ 0.37
CHD3-204ENST00000439235 FAM131AQ6UXB0 335 aa17.36■□□□□ 0.37
CHD3-204ENST00000439235 SEH1LQ96EE3 360 aa17.36■□□□□ 0.37
CHD3-204ENST00000439235 AKIP1Q9NQ31 210 aa17.36■□□□□ 0.37
CHD3-204ENST00000439235 SPTAN1Q13813 2472 aaKnown RBP17.36■□□□□ 0.37
CHD3-204ENST00000439235 TRAV18A0A075B6X5 111 aa17.35■□□□□ 0.37
CHD3-204ENST00000439235 IGHV3OR15-7A0A075B7D8 119 aa17.35■□□□□ 0.37
CHD3-204ENST00000439235 RFPL4AA6NLU0 287 aa17.35■□□□□ 0.37
CHD3-204ENST00000439235 RFPL4AL1F8VTS6 287 aa17.35■□□□□ 0.37
CHD3-204ENST00000439235 PSG2P11465 335 aa17.35■□□□□ 0.37
CHD3-204ENST00000439235 FUT3P21217 361 aa17.35■□□□□ 0.37
CHD3-204ENST00000439235 DNASE1P24855 282 aa17.35■□□□□ 0.37
CHD3-204ENST00000439235 PTBP1P26599 531 aaKnown RBP eCLIP17.35■□□□□ 0.371e-13■■■■■ 31.4
CHD3-204ENST00000439235 PTH2RP49190 550 aa17.35■□□□□ 0.37
CHD3-204ENST00000439235 ATP5J2P56134 94 aa17.35■□□□□ 0.37
CHD3-204ENST00000439235 BTG1P62324 171 aa17.35■□□□□ 0.37
CHD3-204ENST00000439235 PITPNAQ00169 270 aa17.35■□□□□ 0.37
CHD3-204ENST00000439235 SCN1BQ07699 218 aa17.35■□□□□ 0.37
CHD3-204ENST00000439235 IL18Q14116 193 aa17.35■□□□□ 0.37
CHD3-204ENST00000439235 NKAPLQ5M9Q1 402 aa17.35■□□□□ 0.37
CHD3-204ENST00000439235 ATAD3CQ5T2N8 411 aa17.35■□□□□ 0.37
CHD3-204ENST00000439235 STUMQ69YW2 141 aa17.35■□□□□ 0.37
CHD3-204ENST00000439235 PYHIN1Q6K0P9 492 aa17.35■□□□□ 0.37
CHD3-204ENST00000439235 Q6ZTK2 550 aa17.35■□□□□ 0.37
CHD3-204ENST00000439235 IZUMO1Q8IYV9 350 aa17.35■□□□□ 0.37
CHD3-204ENST00000439235 DTX3Q8N9I9 347 aa17.35■□□□□ 0.37
CHD3-204ENST00000439235 C19orf18Q8NEA5 215 aa17.35■□□□□ 0.37
CHD3-204ENST00000439235 RAB1CQ92928 201 aa17.35■□□□□ 0.37
CHD3-204ENST00000439235 GSX2Q9BZM3 304 aa17.35■□□□□ 0.37
CHD3-204ENST00000439235 WDR12Q9GZL7 423 aaKnown RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms