RNA–Protein interactions for RNA: ENST00000437607.1

PTPRF-208, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 788 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-208ENST00000437607 SERPINA2P20848 420 aa10.18□□□□□ -0.78
PTPRF-208ENST00000437607 TALDO1P37837 337 aa10.18□□□□□ -0.78
PTPRF-208ENST00000437607 IL24Q13007 206 aa10.18□□□□□ -0.78
PTPRF-208ENST00000437607 PDZK1IP1Q13113 114 aa10.18□□□□□ -0.78
PTPRF-208ENST00000437607 GPR176Q14439 515 aa10.18□□□□□ -0.78
PTPRF-208ENST00000437607 SLC22A6Q4U2R8 563 aa10.18□□□□□ -0.78
PTPRF-208ENST00000437607 RNF144BQ7Z419 303 aa10.18□□□□□ -0.78
PTPRF-208ENST00000437607 WDR86Q86TI4 376 aa10.18□□□□□ -0.78
PTPRF-208ENST00000437607 LRRC28Q86X40 367 aaPredicted RBP10.18□□□□□ -0.78
PTPRF-208ENST00000437607 CALHM1Q8IU99 346 aa10.18□□□□□ -0.78
PTPRF-208ENST00000437607 SAXO1Q8IYX7 474 aa10.18□□□□□ -0.78
PTPRF-208ENST00000437607 PXT1Q8NFP0 134 aa10.18□□□□□ -0.78
PTPRF-208ENST00000437607 ITLN1Q8WWA0 313 aa10.18□□□□□ -0.78
PTPRF-208ENST00000437607 SLAMF9Q96A28 289 aa10.18□□□□□ -0.78
PTPRF-208ENST00000437607 PHF21AQ96BD5 680 aa10.18□□□□□ -0.78
PTPRF-208ENST00000437607 TSC22D3Q99576 134 aa10.18□□□□□ -0.78
PTPRF-208ENST00000437607 TMEM59Q9BXS4 323 aa10.18□□□□□ -0.78
PTPRF-208ENST00000437607 OR51I2Q9H344 312 aa10.18□□□□□ -0.78
PTPRF-208ENST00000437607 FN3KRPQ9HA64 309 aa10.18□□□□□ -0.78
PTPRF-208ENST00000437607 SAP30LQ9HAJ7 183 aa10.18□□□□□ -0.78
PTPRF-208ENST00000437607 DECR2Q9NUI1 292 aa10.18□□□□□ -0.78
PTPRF-208ENST00000437607 RHBDL2Q9NX52 303 aa10.18□□□□□ -0.78
PTPRF-208ENST00000437607 IL36GQ9NZH8 169 aa10.18□□□□□ -0.78
PTPRF-208ENST00000437607 IL19Q9UHD0 177 aa10.18□□□□□ -0.78
PTPRF-208ENST00000437607 PRKDCP78527 4128 aaKnown RBP10.18□□□□□ -0.78
PTPRF-208ENST00000437607 TMEM272A0A1B0GTI8 110 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 HPGDSO60760 199 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 MPIG6BO95866 241 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 CD55P08174 381 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 CD37P11049 281 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 RAB6AP20340 208 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 MPZP25189 248 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 BMXP51813 675 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 TMEM33P57088 247 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 HILS1P60008 231 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 ACTG1P63261 375 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 MRPS11P82912 194 aaKnown RBP10.17□□□□□ -0.78
PTPRF-208ENST00000437607 FAM189A2Q15884 450 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 CRIP3Q6Q6R5 217 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 Q8IYB0 196 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 SCCPDHQ8NBX0 429 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 OR6Q1Q8NGQ2 317 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 OR5H6Q8NGV6 325 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 OR11L1Q8NGX0 322 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 OR10K1Q8NGX5 313 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 OR51F2Q8NH61 342 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 KCNG3Q8TAE7 436 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 FAM216AQ8WUB2 273 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 AQP3Q92482 292 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 FAM46BQ96A09 425 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 SLC25A28Q96A46 364 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 WDFY2Q96P53 400 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 URM1Q9BTM9 101 aaKnown RBP10.17□□□□□ -0.78
PTPRF-208ENST00000437607 TLNRD1Q9H1K6 362 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 UFSP2Q9NUQ7 469 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 PCDHB10Q9UN67 800 aa10.17□□□□□ -0.78
PTPRF-208ENST00000437607 LOC105371242A0A075B767 164 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 TMEM14DPA8MWL7 114 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 CTDSP2O14595 271 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 CDIPTO14735 213 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 PPIHO43447 177 aaKnown RBP10.16□□□□□ -0.78
PTPRF-208ENST00000437607 KCNAB3O43448 404 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 SYNGR1O43759 233 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 CDC14BO60729 498 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 SCGNO76038 276 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 HTR3BO95264 441 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 APOA1P02647 267 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 EIF4EP06730 217 aaKnown RBP10.16□□□□□ -0.78
PTPRF-208ENST00000437607 VSIG8P0DPA2 414 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 IRF2P14316 349 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 MGMTP16455 207 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 GATA4P43694 442 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 CCL8P80075 99 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 MAB21L1Q13394 359 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 C2orf76Q3KRA6 126 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 SPANXN2Q5MJ10 180 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 FAHD2BQ6P2I3 314 aaPredicted RBP10.16□□□□□ -0.78
PTPRF-208ENST00000437607 FIP1L1Q6UN15 594 aaKnown RBP10.16□□□□□ -0.78
PTPRF-208ENST00000437607 LINC00299Q6ZSB3 139 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 PEG10Q86TG7 708 aaKnown RBP10.16□□□□□ -0.78
PTPRF-208ENST00000437607 MOGAT3Q86VF5 341 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 ZNF418Q8TF45 676 aaPredicted RBP10.16□□□□□ -0.78
PTPRF-208ENST00000437607 RAB40AQ8WXH6 277 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 EMG1Q92979 244 aaKnown RBP10.16□□□□□ -0.78
PTPRF-208ENST00000437607 ERGIC1Q969X5 290 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 SLC25A38Q96DW6 304 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 FAHD2AQ96GK7 314 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 CMTM3Q96MX0 182 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 TMPRSS13Q9BYE2 586 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 C1orf123Q9NWV4 160 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 FBLN5Q9UBX5 448 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 RAB22AQ9UL26 194 aa10.16□□□□□ -0.78
PTPRF-208ENST00000437607 VWFP04275 2813 aa10.15□□□□□ -0.78
PTPRF-208ENST00000437607 TRAV20A0A0B4J274 112 aa10.15□□□□□ -0.78
PTPRF-208ENST00000437607 IGKV1-12A0A0C4DH73 117 aa10.15□□□□□ -0.78
PTPRF-208ENST00000437607 METTL21EPA6NDL7 271 aa10.15□□□□□ -0.78
PTPRF-208ENST00000437607 NXPH2O95156 264 aa10.15□□□□□ -0.78
PTPRF-208ENST00000437607 PTBP3O95758 552 aaKnown RBP10.15□□□□□ -0.78
PTPRF-208ENST00000437607 IGKV1D-12P01611 117 aa10.15□□□□□ -0.78
PTPRF-208ENST00000437607 GTF2F2P13984 249 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms