RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 ZNF680Q8NEM1 530 aa22.02■■□□□ 1.12
CPNE1-216ENST00000437340 DHRS9Q9BPW9 319 aa22.02■■□□□ 1.12
CPNE1-216ENST00000437340 PLK3Q9H4B4 646 aa22.02■■□□□ 1.12
CPNE1-216ENST00000437340 C12orf4Q9NQ89 552 aa22.02■■□□□ 1.12
CPNE1-216ENST00000437340 DECR2Q9NUI1 292 aa22.02■■□□□ 1.12
CPNE1-216ENST00000437340 NECAP2Q9NVZ3 263 aa22.02■■□□□ 1.12
CPNE1-216ENST00000437340 MBD3L4A6NDZ8 208 aaPredicted RBP22.02■■□□□ 1.11
CPNE1-216ENST00000437340 MBD3L3A6NE82 208 aaPredicted RBP22.02■■□□□ 1.11
CPNE1-216ENST00000437340 MBD3L5A6NJ08 208 aaPredicted RBP22.02■■□□□ 1.11
CPNE1-216ENST00000437340 CELA3BP08861 270 aa22.02■■□□□ 1.11
CPNE1-216ENST00000437340 TMPRSS3P57727 454 aa22.02■■□□□ 1.11
CPNE1-216ENST00000437340 TBR1Q16650 682 aa22.02■■□□□ 1.11
CPNE1-216ENST00000437340 MPV17LQ2QL34 196 aa22.02■■□□□ 1.11
CPNE1-216ENST00000437340 OR2T2Q6IF00 324 aa22.02■■□□□ 1.11
CPNE1-216ENST00000437340 ZNF585AQ6P3V2 769 aa22.02■■□□□ 1.11
CPNE1-216ENST00000437340 MYPOPQ86VE0 399 aaPredicted RBP22.02■■□□□ 1.11
CPNE1-216ENST00000437340 MBD3L2Q8NHZ7 208 aaPredicted RBP22.02■■□□□ 1.11
CPNE1-216ENST00000437340 CASTOR1Q8WTX7 329 aa22.02■■□□□ 1.11
CPNE1-216ENST00000437340 MTCH1Q9NZJ7 389 aa22.02■■□□□ 1.11
CPNE1-216ENST00000437340 CACNA1AO00555 2505 aa22.01■■□□□ 1.11
CPNE1-216ENST00000437340 NCOR2Q9Y618 2525 aa22.01■■□□□ 1.11
CPNE1-216ENST00000437340 SPENQ96T58 3664 aaKnown RBP22.01■■□□□ 1.11
CPNE1-216ENST00000437340 C1QTNF9BB2RNN3 333 aa22.01■■□□□ 1.11
CPNE1-216ENST00000437340 C1QTNF9P0C862 333 aa22.01■■□□□ 1.11
CPNE1-216ENST00000437340 PPP1CBP62140 327 aa22.01■■□□□ 1.11
CPNE1-216ENST00000437340 IKZF1Q13422 519 aa22.01■■□□□ 1.11
CPNE1-216ENST00000437340 ZNF660Q6AZW8 331 aaPredicted RBP22.01■■□□□ 1.11
CPNE1-216ENST00000437340 LINC00596Q86U02 117 aa22.01■■□□□ 1.11
CPNE1-216ENST00000437340 C17orf78Q8N4C9 275 aa22.01■■□□□ 1.11
CPNE1-216ENST00000437340 DPCDQ9BVM2 203 aaPredicted RBP22.01■■□□□ 1.11
CPNE1-216ENST00000437340 PKIBQ9C010 78 aa22.01■■□□□ 1.11
CPNE1-216ENST00000437340 OR51B6Q9H340 312 aa22.01■■□□□ 1.11
CPNE1-216ENST00000437340 ZNF442Q9H7R0 627 aa22.01■■□□□ 1.11
CPNE1-216ENST00000437340 ZNF286AQ9HBT8 521 aa22.01■■□□□ 1.11
CPNE1-216ENST00000437340 MKRN2OSH3BPM6 223 aa22■■□□□ 1.11
CPNE1-216ENST00000437340 MPC2O95563 127 aa22■■□□□ 1.11
CPNE1-216ENST00000437340 IFNA7P01567 189 aa22■■□□□ 1.11
CPNE1-216ENST00000437340 IGKV3-15P01624 115 aa22■■□□□ 1.11
CPNE1-216ENST00000437340 CRYABP02511 175 aaKnown RBP22■■□□□ 1.11
CPNE1-216ENST00000437340 CRHP06850 196 aa22■■□□□ 1.11
CPNE1-216ENST00000437340 OR5H8P0DN80 308 aa22■■□□□ 1.11
CPNE1-216ENST00000437340 IL32P24001 234 aa22■■□□□ 1.11
CPNE1-216ENST00000437340 SORDQ00796 357 aa22■■□□□ 1.11
CPNE1-216ENST00000437340 FOXF2Q12947 444 aa22■■□□□ 1.11
CPNE1-216ENST00000437340 IL24Q13007 206 aa22■■□□□ 1.11
CPNE1-216ENST00000437340 DHRS11Q6UWP2 260 aa22■■□□□ 1.11
CPNE1-216ENST00000437340 EXTL1Q92935 676 aa22■■□□□ 1.11
CPNE1-216ENST00000437340 ZNF2Q9BSG1 426 aaPredicted RBP22■■□□□ 1.11
CPNE1-216ENST00000437340 PDCD10Q9BUL8 212 aa22■■□□□ 1.11
CPNE1-216ENST00000437340 FXYD6-FXYD2A0A087WZ82 144 aa21.99■■□□□ 1.11
CPNE1-216ENST00000437340 A0A1W2PR80 420 aa21.99■■□□□ 1.11
CPNE1-216ENST00000437340 ARPC5O15511 151 aa21.99■■□□□ 1.11
CPNE1-216ENST00000437340 LILRA1O75019 489 aa21.99■■□□□ 1.11
CPNE1-216ENST00000437340 TNFSF13O75888 250 aa21.99■■□□□ 1.11
CPNE1-216ENST00000437340 RAC2P15153 192 aa21.99■■□□□ 1.11
CPNE1-216ENST00000437340 OPRM1P35372 400 aa21.99■■□□□ 1.11
CPNE1-216ENST00000437340 RBMXL3Q8N7X1 1067 aaKnown RBP21.99■■□□□ 1.11
CPNE1-216ENST00000437340 FXYD6Q9H0Q3 95 aa21.99■■□□□ 1.11
CPNE1-216ENST00000437340 RHOFQ9HBH0 211 aa21.99■■□□□ 1.11
CPNE1-216ENST00000437340 OBP2BQ9NPH6 170 aa21.99■■□□□ 1.11
CPNE1-216ENST00000437340 RCC2Q9P258 522 aaKnown RBP21.99■■□□□ 1.11
CPNE1-216ENST00000437340 PROCRQ9UNN8 238 aa21.99■■□□□ 1.11
CPNE1-216ENST00000437340 C14orf166Q9Y224 244 aaKnown RBP21.99■■□□□ 1.11
CPNE1-216ENST00000437340 TRAV14DV4A0A0A6YYC5 116 aa21.99■■□□□ 1.11
CPNE1-216ENST00000437340 CGAP01215 116 aa21.99■■□□□ 1.11
CPNE1-216ENST00000437340 RPA2P15927 270 aa21.99■■□□□ 1.11
CPNE1-216ENST00000437340 PTGER4P35408 488 aa21.99■■□□□ 1.11
CPNE1-216ENST00000437340 P2RY6Q15077 328 aa21.99■■□□□ 1.11
CPNE1-216ENST00000437340 SRSF7Q16629 238 aaKnown RBP eCLIP21.99■■□□□ 1.111e-7■□□□□ 9.8
CPNE1-216ENST00000437340 SPATA46Q5T0L3 261 aa21.99■■□□□ 1.11
CPNE1-216ENST00000437340 TMEM65Q6PI78 240 aa21.99■■□□□ 1.11
CPNE1-216ENST00000437340 BRICD5Q6PL45 260 aa21.99■■□□□ 1.11
CPNE1-216ENST00000437340 CLEC18BQ6UXF7 455 aa21.99■■□□□ 1.11
CPNE1-216ENST00000437340 WDR31Q8NA23 367 aa21.99■■□□□ 1.11
CPNE1-216ENST00000437340 COMMD9Q9P000 198 aa21.99■■□□□ 1.11
CPNE1-216ENST00000437340 SELEP16581 610 aa21.98■■□□□ 1.11
CPNE1-216ENST00000437340 CA6P23280 308 aa21.98■■□□□ 1.11
CPNE1-216ENST00000437340 S100A11P31949 105 aa21.98■■□□□ 1.11
CPNE1-216ENST00000437340 UCNP55089 124 aa21.98■■□□□ 1.11
CPNE1-216ENST00000437340 BAMBIQ13145 260 aa21.98■■□□□ 1.11
CPNE1-216ENST00000437340 EIF2S3LQ2VIR3 472 aaKnown RBP21.98■■□□□ 1.11
CPNE1-216ENST00000437340 HAGHLQ6PII5 290 aaPredicted RBP21.98■■□□□ 1.11
CPNE1-216ENST00000437340 Q6ZS49 121 aa21.98■■□□□ 1.11
CPNE1-216ENST00000437340 KCTD9Q7L273 389 aa21.98■■□□□ 1.11
CPNE1-216ENST00000437340 COQ8AQ8NI60 647 aa21.98■■□□□ 1.11
CPNE1-216ENST00000437340 DYRK2Q92630 601 aa21.98■■□□□ 1.11
CPNE1-216ENST00000437340 STARD4Q96DR4 205 aa21.98■■□□□ 1.11
CPNE1-216ENST00000437340 ABHD17AQ96GS6 310 aa21.98■■□□□ 1.11
CPNE1-216ENST00000437340 OR2J1Q9GZK6 312 aa21.98■■□□□ 1.11
CPNE1-216ENST00000437340 CTSDP07339 412 aaPredicted RBP21.97■■□□□ 1.11
CPNE1-216ENST00000437340 SLC25A4P12235 298 aa21.97■■□□□ 1.11
CPNE1-216ENST00000437340 PGAM2P15259 253 aa21.97■■□□□ 1.11
CPNE1-216ENST00000437340 GLRA1P23415 457 aa21.97■■□□□ 1.11
CPNE1-216ENST00000437340 UCP2P55851 309 aa21.97■■□□□ 1.11
CPNE1-216ENST00000437340 SUPT4H1P63272 117 aaKnown RBP21.97■■□□□ 1.11
CPNE1-216ENST00000437340 PDCD1Q15116 288 aa21.97■■□□□ 1.11
CPNE1-216ENST00000437340 MICU1Q9BPX6 476 aa21.97■■□□□ 1.11
CPNE1-216ENST00000437340 RTL8AQ9BWD3 113 aa21.97■■□□□ 1.11
CPNE1-216ENST00000437340 OR51I2Q9H344 312 aa21.97■■□□□ 1.11
CPNE1-216ENST00000437340 F8VVB4 439 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms