RNA–Protein interactions for RNA: ENST00000435986.1

HMGB1P45-201, Transcript of high mobility group box 1 pseudogene 45, humanhuman

BASIC

Gene HMGB1P45, Length 653 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P45-201ENST00000435986 ARRDC1Q8N5I2 433 aa3.07□□□□□ -1.92
HMGB1P45-201ENST00000435986 C12orf29Q8N999 325 aa3.07□□□□□ -1.92
HMGB1P45-201ENST00000435986 TMEM35BQ8NCS4 154 aa3.07□□□□□ -1.92
HMGB1P45-201ENST00000435986 OR5AR1Q8NGP9 310 aa3.07□□□□□ -1.92
HMGB1P45-201ENST00000435986 OR10X1Q8NGY0 326 aa3.07□□□□□ -1.92
HMGB1P45-201ENST00000435986 OR10Z1Q8NGY1 313 aa3.07□□□□□ -1.92
HMGB1P45-201ENST00000435986 OR6K3Q8NGY3 331 aa3.07□□□□□ -1.92
HMGB1P45-201ENST00000435986 OR51E1Q8TCB6 317 aa3.07□□□□□ -1.92
HMGB1P45-201ENST00000435986 MRAP2Q96G30 205 aa3.07□□□□□ -1.92
HMGB1P45-201ENST00000435986 CEP170P1Q96L14 293 aa3.07□□□□□ -1.92
HMGB1P45-201ENST00000435986 GABRG3Q99928 467 aa3.07□□□□□ -1.92
HMGB1P45-201ENST00000435986 DDA1Q9BW61 102 aa3.07□□□□□ -1.92
HMGB1P45-201ENST00000435986 CDC42EP4Q9H3Q1 356 aaKnown RBP3.07□□□□□ -1.92
HMGB1P45-201ENST00000435986 MAP1LC3AQ9H492 121 aa3.07□□□□□ -1.92
HMGB1P45-201ENST00000435986 PRORYQ9H606 182 aa3.07□□□□□ -1.92
HMGB1P45-201ENST00000435986 PARVBQ9HBI1 364 aa3.07□□□□□ -1.92
HMGB1P45-201ENST00000435986 PARVAQ9NVD7 372 aa3.07□□□□□ -1.92
HMGB1P45-201ENST00000435986 CMTM6Q9NX76 183 aa3.07□□□□□ -1.92
HMGB1P45-201ENST00000435986 TAS2R13Q9NYV9 303 aa3.07□□□□□ -1.92
HMGB1P45-201ENST00000435986 ZNF391Q9UJN7 358 aa3.07□□□□□ -1.92
HMGB1P45-201ENST00000435986 TP53TG5Q9Y2B4 290 aa3.07□□□□□ -1.92
HMGB1P45-201ENST00000435986 ASTN1O14525 1302 aa3.07□□□□□ -1.92
HMGB1P45-201ENST00000435986 LTBP1Q14766 1721 aa3.07□□□□□ -1.92
HMGB1P45-201ENST00000435986 IGHV3-64DA0A0J9YX35 117 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 FAM240AA0A1B0GVK7 77 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 DAPL1A0PJW8 107 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 VPS37CA5D8V6 355 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 ZNF729A6NN14 1252 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 TNFRSF11BO00300 401 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 UBDO15205 165 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 TRAF3IP2O43734 574 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 SS18L1O75177 396 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 SPAG7O75391 227 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 SLC22A5O76082 557 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 GABARAPO95166 117 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 HLA-DPB1P04440 258 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 FOLR1P15328 257 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 KCNE1P15382 129 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 USF1P22415 310 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 GPX4P36969 197 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 GALR1P47211 349 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 ACOT2P49753 483 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 SULT1A1P50225 295 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 SULT1A2P50226 295 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 LHX2P50458 406 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 SMARCA2P51531 1590 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 NCBP2P52298 156 aaKnown RBP eCLIP3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 TCL1AP56279 114 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 RAB38P57729 211 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 TFAMQ00059 246 aaKnown RBP3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 REG3AQ06141 175 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 ERCC8Q13216 396 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 HLA-DRB5Q30154 266 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 CEACAM21Q3KPI0 293 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 SLC25A35Q3KQZ1 300 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 CCDC58Q4VC31 144 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 ARHGAP21Q5T5U3 1957 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 EPGNQ6UW88 154 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 FAM19A5Q7Z5A7 132 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 LINC01551Q86U37 167 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 PBRM1Q86U86 1689 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 DAW1Q8N136 415 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 SPICQ8N5J4 248 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 METTL13Q8N6R0 699 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 OR10J6PQ8NGY7 276 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 MAFIPQ8WZ33 124 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 RERGQ96A58 199 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 DDIT4LQ96D03 193 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 ZMYND19Q96E35 227 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 RMND5BQ96G75 393 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 RNF185Q96GF1 192 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 BMFQ96LC9 184 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 COL21A1Q96P44 957 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 DOK1Q99704 481 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 SLC25A39Q9BZJ4 359 aaPredicted RBP3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 SLC19A3Q9BZV2 496 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 COA1Q9GZY4 146 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 GLTPQ9NZD2 209 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 COMMD9Q9P000 198 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 SMPXQ9UHP9 88 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 FBXO5Q9UKT4 447 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 F11RQ9Y624 299 aaKnown RBP3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 ALG5Q9Y673 324 aa3.06□□□□□ -1.92
HMGB1P45-201ENST00000435986 NUP153P49790 1475 aaKnown RBP3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 SNAPC4Q5SXM2 1469 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 IGHV2OR16-5A0A0B4J2B6 119 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 EFCAB10A6NFE3 127 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 SMIM9A6NGZ8 99 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 F5H5K5 113 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 INS-IGF2F8WCM5 200 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 STX10O60499 249 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 OR2B3O76000 313 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 CD74P04233 296 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 GUSBP08236 651 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 OR5H8P0DN80 308 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 GTF2F2P13984 249 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 GGT1P19440 569 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 ALOX5APP20292 161 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 PPOXP50336 477 aa3.05□□□□□ -1.92
HMGB1P45-201ENST00000435986 UBE2E1P51965 193 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms