RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 RABL2AQ9UBK7 228 aaPredicted RBP22.25■■□□□ 1.15
TMEM248-205ENST00000433271 RABL2BQ9UNT1 228 aa22.25■■□□□ 1.15
TMEM248-205ENST00000433271 TACC2O95359 2948 aa22.25■■□□□ 1.15
TMEM248-205ENST00000433271 FOXI3A8MTJ6 420 aaPredicted RBP22.24■■□□□ 1.15
TMEM248-205ENST00000433271 TMEM178BH3BS89 294 aa22.24■■□□□ 1.15
TMEM248-205ENST00000433271 PTBP1P26599 531 aaKnown RBP eCLIP22.24■■□□□ 1.157e-8■■■□□ 17.8
TMEM248-205ENST00000433271 SNU13P55769 128 aaKnown RBP22.24■■□□□ 1.15
TMEM248-205ENST00000433271 MPV17LQ2QL34 196 aa22.24■■□□□ 1.15
TMEM248-205ENST00000433271 IZUMO1Q8IYV9 350 aa22.24■■□□□ 1.15
TMEM248-205ENST00000433271 MRPS7Q9Y2R9 242 aaKnown RBP22.24■■□□□ 1.15
TMEM248-205ENST00000433271 CELSR2Q9HCU4 2923 aa22.24■■□□□ 1.15
TMEM248-205ENST00000433271 KNG1P01042 644 aa22.24■■□□□ 1.15
TMEM248-205ENST00000433271 BLVRBP30043 206 aaPredicted RBP22.24■■□□□ 1.15
TMEM248-205ENST00000433271 IL18Q14116 193 aa22.24■■□□□ 1.15
TMEM248-205ENST00000433271 RDH5Q92781 318 aa22.24■■□□□ 1.15
TMEM248-205ENST00000433271 RAB3CQ96E17 227 aa22.24■■□□□ 1.15
TMEM248-205ENST00000433271 SEH1LQ96EE3 360 aa22.24■■□□□ 1.15
TMEM248-205ENST00000433271 WDR12Q9GZL7 423 aaKnown RBP22.24■■□□□ 1.15
TMEM248-205ENST00000433271 CXorf56Q9H5V9 222 aa22.24■■□□□ 1.15
TMEM248-205ENST00000433271 DLL4Q9NR61 685 aa22.24■■□□□ 1.15
TMEM248-205ENST00000433271 DCAF16Q9NXF7 216 aa22.24■■□□□ 1.15
TMEM248-205ENST00000433271 USF3Q68DE3 2245 aa22.23■■□□□ 1.15
TMEM248-205ENST00000433271 TRAV18A0A075B6X5 111 aa22.23■■□□□ 1.15
TMEM248-205ENST00000433271 A0A0G2JMP0 313 aa22.23■■□□□ 1.15
TMEM248-205ENST00000433271 A0A0X1KG70 313 aa22.23■■□□□ 1.15
TMEM248-205ENST00000433271 OR7C1O76099 320 aaPredicted RBP22.23■■□□□ 1.15
TMEM248-205ENST00000433271 DUSP1P28562 367 aa22.23■■□□□ 1.15
TMEM248-205ENST00000433271 MNDAP41218 407 aa22.23■■□□□ 1.15
TMEM248-205ENST00000433271 PTH2RP49190 550 aa22.23■■□□□ 1.15
TMEM248-205ENST00000433271 TMEM50BP56557 158 aa22.23■■□□□ 1.15
TMEM248-205ENST00000433271 MADCAM1Q13477 382 aa22.23■■□□□ 1.15
TMEM248-205ENST00000433271 SIGIRRQ6IA17 410 aa22.23■■□□□ 1.15
TMEM248-205ENST00000433271 OR4M2Q8NGB6 313 aa22.23■■□□□ 1.15
TMEM248-205ENST00000433271 H3BUI4 141 aa22.22■■□□□ 1.15
TMEM248-205ENST00000433271 F12P00748 615 aaPredicted RBP22.22■■□□□ 1.15
TMEM248-205ENST00000433271 HLA-DQB1P01920 261 aa22.22■■□□□ 1.15
TMEM248-205ENST00000433271 COL8A2P25067 703 aa22.22■■□□□ 1.15
TMEM248-205ENST00000433271 TAS2R20P59543 309 aa22.22■■□□□ 1.15
TMEM248-205ENST00000433271 ZNF846Q147U1 533 aa22.22■■□□□ 1.15
TMEM248-205ENST00000433271 ZNF787Q6DD87 383 aa22.22■■□□□ 1.15
TMEM248-205ENST00000433271 PYHIN1Q6K0P9 492 aa22.22■■□□□ 1.15
TMEM248-205ENST00000433271 CHST4Q8NCG5 386 aa22.22■■□□□ 1.15
TMEM248-205ENST00000433271 IFT22Q9H7X7 185 aa22.22■■□□□ 1.15
TMEM248-205ENST00000433271 ZNF581Q9P0T4 197 aa22.22■■□□□ 1.15
TMEM248-205ENST00000433271 NLKQ9UBE8 527 aa22.22■■□□□ 1.15
TMEM248-205ENST00000433271 DNAJB11Q9UBS4 358 aa22.22■■□□□ 1.15
TMEM248-205ENST00000433271 GLS2Q9UI32 602 aa22.22■■□□□ 1.15
TMEM248-205ENST00000433271 PTPN13Q12923 2485 aa22.22■■□□□ 1.15
TMEM248-205ENST00000433271 TANC2Q9HCD6 1990 aa22.22■■□□□ 1.15
TMEM248-205ENST00000433271 SPG11Q96JI7 2443 aa22.21■■□□□ 1.15
TMEM248-205ENST00000433271 DAOP14920 347 aa22.21■■□□□ 1.15
TMEM248-205ENST00000433271 EFNA4P52798 201 aa22.21■■□□□ 1.15
TMEM248-205ENST00000433271 PITPNAQ00169 270 aa22.21■■□□□ 1.15
TMEM248-205ENST00000433271 IKZF1Q13422 519 aa22.21■■□□□ 1.15
TMEM248-205ENST00000433271 PDCD1Q15116 288 aa22.21■■□□□ 1.15
TMEM248-205ENST00000433271 ZNF79Q15937 498 aa22.21■■□□□ 1.15
TMEM248-205ENST00000433271 PLAC9Q5JTB6 97 aa22.21■■□□□ 1.15
TMEM248-205ENST00000433271 FAM201AQ5SY85 155 aa22.21■■□□□ 1.15
TMEM248-205ENST00000433271 Q6ZTK2 550 aa22.21■■□□□ 1.15
TMEM248-205ENST00000433271 C15orf40Q8WUR7 153 aa22.21■■□□□ 1.15
TMEM248-205ENST00000433271 YIPF5Q969M3 257 aa22.21■■□□□ 1.15
TMEM248-205ENST00000433271 ABHD1Q96SE0 405 aa22.21■■□□□ 1.15
TMEM248-205ENST00000433271 SH2D1BO14796 132 aa22.2■■□□□ 1.15
TMEM248-205ENST00000433271 FUT3P21217 361 aa22.2■■□□□ 1.15
TMEM248-205ENST00000433271 MICBQ29980 383 aa22.2■■□□□ 1.15
TMEM248-205ENST00000433271 SFRP4Q6FHJ7 346 aaPredicted RBP22.2■■□□□ 1.15
TMEM248-205ENST00000433271 ARHGAP5-AS1Q96IT6 56 aa22.2■■□□□ 1.15
TMEM248-205ENST00000433271 NEDD4LQ96PU5 975 aa22.2■■□□□ 1.15
TMEM248-205ENST00000433271 LIME1Q9H400 295 aa22.2■■□□□ 1.15
TMEM248-205ENST00000433271 HSF4Q9ULV5 492 aa22.2■■□□□ 1.15
TMEM248-205ENST00000433271 PLEKHA6Q9Y2H5 1048 aa22.2■■□□□ 1.15
TMEM248-205ENST00000433271 WIPI2Q9Y4P8 454 aa22.2■■□□□ 1.15
TMEM248-205ENST00000433271 RFPL4AA6NLU0 287 aa22.2■■□□□ 1.14
TMEM248-205ENST00000433271 OR2AT4A6NND4 320 aa22.2■■□□□ 1.14
TMEM248-205ENST00000433271 RFPL4AL1F8VTS6 287 aa22.2■■□□□ 1.14
TMEM248-205ENST00000433271 LYNX1G3V0Z9 82 aa22.2■■□□□ 1.14
TMEM248-205ENST00000433271 DEGS1O15121 323 aa22.2■■□□□ 1.14
TMEM248-205ENST00000433271 RP2O75695 350 aa22.2■■□□□ 1.14
TMEM248-205ENST00000433271 LY6HO94772 140 aa22.2■■□□□ 1.14
TMEM248-205ENST00000433271 LYNX1P0DP58 116 aa22.2■■□□□ 1.14
TMEM248-205ENST00000433271 MUC1P15941 1255 aaPredicted RBP22.2■■□□□ 1.14
TMEM248-205ENST00000433271 HIST1H1DP16402 221 aaKnown RBP22.2■■□□□ 1.14
TMEM248-205ENST00000433271 CHATP28329 748 aa22.2■■□□□ 1.14
TMEM248-205ENST00000433271 CD80P33681 288 aa22.2■■□□□ 1.14
TMEM248-205ENST00000433271 CDNFQ49AH0 187 aa22.2■■□□□ 1.14
TMEM248-205ENST00000433271 TEX36Q5VZQ5 186 aa22.2■■□□□ 1.14
TMEM248-205ENST00000433271 Q6P435 159 aa22.2■■□□□ 1.14
TMEM248-205ENST00000433271 AUNIPQ9H7T9 357 aa22.2■■□□□ 1.14
TMEM248-205ENST00000433271 ZMAT3Q9HA38 289 aaKnown RBP22.2■■□□□ 1.14
TMEM248-205ENST00000433271 SEBOXQ9HB31 216 aaPredicted RBP22.2■■□□□ 1.14
TMEM248-205ENST00000433271 SPACA1Q9HBV2 294 aa22.2■■□□□ 1.14
TMEM248-205ENST00000433271 IGHV3OR15-7A0A075B7D8 119 aa22.19■■□□□ 1.14
TMEM248-205ENST00000433271 OOEPA6NGQ2 149 aa22.19■■□□□ 1.14
TMEM248-205ENST00000433271 PDCD6O75340 191 aa22.19■■□□□ 1.14
TMEM248-205ENST00000433271 HAND1O96004 215 aa22.19■■□□□ 1.14
TMEM248-205ENST00000433271 PSG2P11465 335 aa22.19■■□□□ 1.14
TMEM248-205ENST00000433271 SCN1BQ07699 218 aa22.19■■□□□ 1.14
TMEM248-205ENST00000433271 ARL6IP1Q15041 203 aa22.19■■□□□ 1.14
TMEM248-205ENST00000433271 ZNF260Q3ZCT1 412 aa22.19■■□□□ 1.14
TMEM248-205ENST00000433271 SNX29P2Q8IUI4 249 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms