RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 FADS6Q8N9I5 356 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 ZFP62Q8NB50 900 aaPredicted RBP6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 RNF138Q8WVD3 245 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 SLC39A7Q92504 469 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 TCEAL3Q969E4 200 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 PBDC1Q9BVG4 233 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 SLC35B3Q9H1N7 401 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 OCIAD1Q9NX40 245 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 P4HTMQ9NXG6 502 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 ZDHHC8Q9ULC8 765 aa6.54□□□□□ -1.36
SMARCC1-202ENST00000425518 IGKV1-12A0A0C4DH73 117 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 EIF1BO60739 113 aaKnown RBP6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 CA11O75493 328 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 IGKV1D-12P01611 117 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 CD63P08962 238 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 AADACP22760 399 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 CHATP28329 748 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 HTR5AP47898 357 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 POLR2GP62487 172 aaKnown RBP eCLIP6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 CCL20P78556 96 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 H3F3AP84243 136 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 C10orf128Q5T292 105 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 GPR157Q5UAW9 335 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 OSR2Q8N2R0 312 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 SLC35G3Q8N808 338 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 SUMF2Q8NBJ7 301 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 OR2G3Q8NGZ4 309 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 LYPD6BQ8NI32 183 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 TMEM54Q969K7 222 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 SPSB1Q96BD6 273 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 ALKBH3Q96Q83 286 aaPredicted RBP6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 SUCNR1Q9BXA5 334 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 EGLN1Q9GZT9 426 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 BCO1Q9HAY6 547 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 ZNF286AQ9HBT8 521 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 UBE2J1Q9Y385 318 aaPredicted RBP6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 IGHV5-10-1A0A0J9YXX1 117 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 LOC102725191A0A1B0GVB3 256 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 NKX2-6A6NCS4 301 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 H7C1Q1 480 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 S100A8P05109 93 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 ZNF32P17041 273 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 MALLQ13021 153 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 CNN3Q15417 329 aaKnown RBP6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 HAGHQ16775 308 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 RNF212Q495C1 297 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 IGSF11Q5DX21 431 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 NCMAPQ5T1S8 102 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 YRDCQ86U90 279 aaKnown RBP6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 TMEM217Q8N7C4 229 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 TP53RKQ96S44 253 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 GINS3Q9BRX5 216 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 GSN-AS1Q9NRJ2 163 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 VPS13AQ96RL7 3174 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 CST7O76096 145 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 VAMP5O95183 116 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 RD3LP0DJH9 198 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 AGAP20933 346 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 RPS10P46783 165 aaKnown RBP6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 PLCXD3Q63HM9 321 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 TMEM123Q8N131 208 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 ZIC4Q8N9L1 334 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 OR1J1Q8NGS3 322 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 OR1F12Q8NHA8 337 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 MSI2Q96DH6 328 aaKnown RBP6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 GALNT14Q96FL9 552 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 CCDC74BQ96LY2 380 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 SCRT1Q9BWW7 348 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 WNT16Q9UBV4 365 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 MIOXQ9UGB7 285 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 SLC7A11Q9UPY5 501 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 PTRH2Q9Y3E5 179 aaKnown RBP6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 MMP24Q9Y5R2 645 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 NCOR1O75376 2440 aa6.53□□□□□ -1.36
SMARCC1-202ENST00000425518 ZNF727A8MUV8 499 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 UBE2CO00762 179 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 HSPB6O14558 160 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 ZIC3O60481 467 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 OR2C1O95371 312 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 IGHV3-9P01782 118 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 CCNOP22674 350 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 DTYMKP23919 212 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 OTX1P32242 354 aaPredicted RBP6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 EWSR1Q01844 656 aaKnown RBP eCLIP6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 FAM27BQ5VT28 67 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 ZNF695Q8IW36 515 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 COMMD1Q8N668 190 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 MR1Q95460 341 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 C18orf12Q96KH6 178 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 SRXN1Q9BYN0 137 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 ARV1Q9H2C2 271 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 ZNF576Q9H609 170 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 DECR2Q9NUI1 292 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 URGCP-MRPS24S4R325 110 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 CUL9Q8IWT3 2517 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 SSSCA1O60232 199 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 SMIM6P0DI80 62 aa6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 HOXB1P14653 301 aaPredicted RBP6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 FKBP2P26885 142 aaKnown RBP6.52□□□□□ -1.37
SMARCC1-202ENST00000425518 VAMP2P63027 116 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms