RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 SF3B6Q9Y3B4 125 aaKnown RBP10.39□□□□□ -0.75
SGCE-203ENST00000425444 IGKV1-9A0A0C4DH69 117 aa10.38□□□□□ -0.75
SGCE-203ENST00000425444 GPR137BO60478 399 aa10.38□□□□□ -0.75
SGCE-203ENST00000425444 CHRM2P08172 466 aa10.38□□□□□ -0.75
SGCE-203ENST00000425444 CCDC159P0C7I6 412 aa10.38□□□□□ -0.75
SGCE-203ENST00000425444 IER3P46695 156 aa10.38□□□□□ -0.75
SGCE-203ENST00000425444 GBX2P52951 348 aaPredicted RBP10.38□□□□□ -0.75
SGCE-203ENST00000425444 SNU13P55769 128 aaKnown RBP10.38□□□□□ -0.75
SGCE-203ENST00000425444 EDDM3BP56851 147 aa10.38□□□□□ -0.75
SGCE-203ENST00000425444 LOXL3P58215 753 aa10.38□□□□□ -0.75
SGCE-203ENST00000425444 ACSM1Q08AH1 577 aa10.38□□□□□ -0.75
SGCE-203ENST00000425444 MRPL28Q13084 256 aaKnown RBP10.38□□□□□ -0.75
SGCE-203ENST00000425444 KLHL22Q53GT1 634 aa10.38□□□□□ -0.75
SGCE-203ENST00000425444 KPRPQ5T749 579 aaPredicted RBP10.38□□□□□ -0.75
SGCE-203ENST00000425444 GDPD3Q7L5L3 318 aa10.38□□□□□ -0.75
SGCE-203ENST00000425444 OR51A4Q8NGJ6 313 aa10.38□□□□□ -0.75
SGCE-203ENST00000425444 OR10AC1Q8NH08 325 aa10.38□□□□□ -0.75
SGCE-203ENST00000425444 TSEN15Q8WW01 171 aaKnown RBP10.38□□□□□ -0.75
SGCE-203ENST00000425444 APH1BQ8WW43 257 aa10.38□□□□□ -0.75
SGCE-203ENST00000425444 CYGBQ8WWM9 190 aa10.38□□□□□ -0.75
SGCE-203ENST00000425444 DYRK2Q92630 601 aa10.38□□□□□ -0.75
SGCE-203ENST00000425444 TNFRSF14Q92956 283 aa10.38□□□□□ -0.75
SGCE-203ENST00000425444 RFT1Q96AA3 541 aa10.38□□□□□ -0.75
SGCE-203ENST00000425444 ISG20L2Q9H9L3 353 aaKnown RBP10.38□□□□□ -0.75
SGCE-203ENST00000425444 C1RLQ9NZP8 487 aa10.38□□□□□ -0.75
SGCE-203ENST00000425444 TMEM212A6NML5 194 aa10.37□□□□□ -0.75
SGCE-203ENST00000425444 OR4C45A6NMZ5 311 aa10.37□□□□□ -0.75
SGCE-203ENST00000425444 F8VVB4 439 aa10.37□□□□□ -0.75
SGCE-203ENST00000425444 F8VWA3 439 aa10.37□□□□□ -0.75
SGCE-203ENST00000425444 K7N7A8 449 aa10.37□□□□□ -0.75
SGCE-203ENST00000425444 HAND1O96004 215 aa10.37□□□□□ -0.75
SGCE-203ENST00000425444 CCL3L1P16619 93 aa10.37□□□□□ -0.75
SGCE-203ENST00000425444 PRKACAP17612 351 aa10.37□□□□□ -0.75
SGCE-203ENST00000425444 BCL3P20749 454 aa10.37□□□□□ -0.75
SGCE-203ENST00000425444 COX7A1P24310 79 aa10.37□□□□□ -0.75
SGCE-203ENST00000425444 RPL15P61313 204 aaKnown RBP10.37□□□□□ -0.75
SGCE-203ENST00000425444 RELBQ01201 579 aa10.37□□□□□ -0.75
SGCE-203ENST00000425444 EDDM3AQ14507 147 aa10.37□□□□□ -0.75
SGCE-203ENST00000425444 ZNF273Q14593 569 aa10.37□□□□□ -0.75
SGCE-203ENST00000425444 RCN1Q15293 331 aa10.37□□□□□ -0.75
SGCE-203ENST00000425444 C2orf68Q2NKX9 166 aa10.37□□□□□ -0.75
SGCE-203ENST00000425444 TMEM200BQ69YZ2 307 aa10.37□□□□□ -0.75
SGCE-203ENST00000425444 GDPGP1Q6ZNW5 385 aa10.37□□□□□ -0.75
SGCE-203ENST00000425444 ZSCAN4Q8NAM6 433 aaPredicted RBP10.37□□□□□ -0.75
SGCE-203ENST00000425444 OR5AK2Q8NH90 309 aa10.37□□□□□ -0.75
SGCE-203ENST00000425444 ZCCHC4Q9H5U6 513 aa10.37□□□□□ -0.75
SGCE-203ENST00000425444 HEXA-AS1Q9H8Q6 139 aa10.37□□□□□ -0.75
SGCE-203ENST00000425444 RBFOX1Q9NWB1 397 aaKnown RBP10.37□□□□□ -0.75
SGCE-203ENST00000425444 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.37□□□□□ -0.75
SGCE-203ENST00000425444 GLS2Q9UI32 602 aa10.37□□□□□ -0.75
SGCE-203ENST00000425444 DHDHQ9UQ10 334 aa10.37□□□□□ -0.75
SGCE-203ENST00000425444 RNF114Q9Y508 228 aa10.37□□□□□ -0.75
SGCE-203ENST00000425444 TRBV2A0A0J9YWF9 115 aa10.36□□□□□ -0.75
SGCE-203ENST00000425444 NDUFA7O95182 113 aa10.36□□□□□ -0.75
SGCE-203ENST00000425444 CLIC3O95833 236 aa10.36□□□□□ -0.75
SGCE-203ENST00000425444 HCKP08631 526 aa10.36□□□□□ -0.75
SGCE-203ENST00000425444 RPSAP08865 295 aaKnown RBP10.36□□□□□ -0.75
SGCE-203ENST00000425444 CALCBP10092 127 aa10.36□□□□□ -0.75
SGCE-203ENST00000425444 GABRR1P24046 479 aa10.36□□□□□ -0.75
SGCE-203ENST00000425444 NPBWR2P48146 333 aa10.36□□□□□ -0.75
SGCE-203ENST00000425444 ERVFRD-1P60508 538 aa10.36□□□□□ -0.75
SGCE-203ENST00000425444 SMN1Q16637 294 aaKnown RBP10.36□□□□□ -0.75
SGCE-203ENST00000425444 LPCAT4Q643R3 524 aa10.36□□□□□ -0.75
SGCE-203ENST00000425444 DHRS7BQ6IAN0 325 aaPredicted RBP10.36□□□□□ -0.75
SGCE-203ENST00000425444 ZNF782Q6ZMW2 699 aaPredicted RBP10.36□□□□□ -0.75
SGCE-203ENST00000425444 OR8H2Q8N162 312 aa10.36□□□□□ -0.75
SGCE-203ENST00000425444 FAM58AQ8N1B3 248 aa10.36□□□□□ -0.75
SGCE-203ENST00000425444 OR5D18Q8NGL1 313 aa10.36□□□□□ -0.75
SGCE-203ENST00000425444 HAVCR2Q8TDQ0 301 aa10.36□□□□□ -0.75
SGCE-203ENST00000425444 SNX22Q96L94 193 aa10.36□□□□□ -0.75
SGCE-203ENST00000425444 SPACA5Q96QH8 159 aa10.36□□□□□ -0.75
SGCE-203ENST00000425444 PDCD1LG2Q9BQ51 273 aa10.36□□□□□ -0.75
SGCE-203ENST00000425444 CHST6Q9GZX3 395 aa10.36□□□□□ -0.75
SGCE-203ENST00000425444 C8orf4Q9NR00 106 aa10.36□□□□□ -0.75
SGCE-203ENST00000425444 IL36RNQ9UBH0 155 aa10.36□□□□□ -0.75
SGCE-203ENST00000425444 VPREB3Q9UKI3 123 aa10.36□□□□□ -0.75
SGCE-203ENST00000425444 PCDHGB5Q9Y5G0 923 aa10.36□□□□□ -0.75
SGCE-203ENST00000425444 SACSQ9NZJ4 4579 aa10.36□□□□□ -0.75
SGCE-203ENST00000425444 IRGMA1A4Y4 181 aa10.35□□□□□ -0.75
SGCE-203ENST00000425444 MEX3AA1L020 520 aaKnown RBP10.35□□□□□ -0.75
SGCE-203ENST00000425444 E9PI62 339 aa10.35□□□□□ -0.75
SGCE-203ENST00000425444 SULT1B1O43704 296 aa10.35□□□□□ -0.75
SGCE-203ENST00000425444 ZNF737O75373 536 aa10.35□□□□□ -0.75
SGCE-203ENST00000425444 WBP4O75554 376 aaKnown RBP10.35□□□□□ -0.75
SGCE-203ENST00000425444 ZFPL1O95159 310 aa10.35□□□□□ -0.75
SGCE-203ENST00000425444 MYL12AP19105 171 aa10.35□□□□□ -0.75
SGCE-203ENST00000425444 PEX2P28328 305 aa10.35□□□□□ -0.75
SGCE-203ENST00000425444 DUSP1P28562 367 aa10.35□□□□□ -0.75
SGCE-203ENST00000425444 LGALS4P56470 323 aa10.35□□□□□ -0.75
SGCE-203ENST00000425444 PDZK1IP1Q13113 114 aa10.35□□□□□ -0.75
SGCE-203ENST00000425444 GRK1Q15835 563 aa10.35□□□□□ -0.75
SGCE-203ENST00000425444 SPIN3Q5JUX0 258 aa10.35□□□□□ -0.75
SGCE-203ENST00000425444 SAMD5Q5TGI4 173 aa10.35□□□□□ -0.75
SGCE-203ENST00000425444 ZNF691Q5VV52 312 aa10.35□□□□□ -0.75
SGCE-203ENST00000425444 TTC23Q5W5X9 447 aa10.35□□□□□ -0.75
SGCE-203ENST00000425444 HCP5Q6MZN7 132 aa10.35□□□□□ -0.75
SGCE-203ENST00000425444 SERPINA12Q8IW75 414 aa10.35□□□□□ -0.75
SGCE-203ENST00000425444 PACRGLQ8N7B6 248 aa10.35□□□□□ -0.75
SGCE-203ENST00000425444 SETD9Q8NE22 299 aa10.35□□□□□ -0.75
SGCE-203ENST00000425444 OR5D14Q8NGL3 314 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms