RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 NECAP2Q9NVZ3 263 aa12.3□□□□□ -0.44
TPM3P9-201ENST00000424846 FOXD3Q9UJU5 478 aaPredicted RBP12.3□□□□□ -0.44
TPM3P9-201ENST00000424846 H7C1Q1 480 aa12.29□□□□□ -0.44
TPM3P9-201ENST00000424846 TXNL1O43396 289 aa12.29□□□□□ -0.44
TPM3P9-201ENST00000424846 NXPH3O95157 252 aa12.29□□□□□ -0.44
TPM3P9-201ENST00000424846 ONECUT2O95948 504 aa12.29□□□□□ -0.44
TPM3P9-201ENST00000424846 SEC11BP0C7V7 166 aa12.29□□□□□ -0.44
TPM3P9-201ENST00000424846 SRFP11831 508 aa12.29□□□□□ -0.44
TPM3P9-201ENST00000424846 ZNF14P17017 642 aaPredicted RBP12.29□□□□□ -0.44
TPM3P9-201ENST00000424846 RAB5AP20339 215 aa12.29□□□□□ -0.44
TPM3P9-201ENST00000424846 CRYGSP22914 178 aa12.29□□□□□ -0.44
TPM3P9-201ENST00000424846 OMGP23515 440 aa12.29□□□□□ -0.44
TPM3P9-201ENST00000424846 ZNF133P52736 654 aaPredicted RBP12.29□□□□□ -0.44
TPM3P9-201ENST00000424846 IGSF11Q5DX21 431 aa12.29□□□□□ -0.44
TPM3P9-201ENST00000424846 Q6ZSR3 168 aa12.29□□□□□ -0.44
TPM3P9-201ENST00000424846 NTNG2Q96CW9 530 aa12.29□□□□□ -0.44
TPM3P9-201ENST00000424846 CHRDQ9H2X0 955 aa12.29□□□□□ -0.44
TPM3P9-201ENST00000424846 KCNIP3Q9Y2W7 256 aa12.29□□□□□ -0.44
TPM3P9-201ENST00000424846 FREM1Q5H8C1 2179 aa12.29□□□□□ -0.44
TPM3P9-201ENST00000424846 IGHV5-10-1A0A0J9YXX1 117 aa12.29□□□□□ -0.44
TPM3P9-201ENST00000424846 GPR137BO60478 399 aa12.29□□□□□ -0.44
TPM3P9-201ENST00000424846 LCATP04180 440 aa12.29□□□□□ -0.44
TPM3P9-201ENST00000424846 FABP1P07148 127 aa12.29□□□□□ -0.44
TPM3P9-201ENST00000424846 AADACP22760 399 aa12.29□□□□□ -0.44
TPM3P9-201ENST00000424846 ITGA3P26006 1051 aa12.29□□□□□ -0.44
TPM3P9-201ENST00000424846 PAX6P26367 422 aa12.29□□□□□ -0.44
TPM3P9-201ENST00000424846 FOXL2NBQ6ZUU3 175 aa12.29□□□□□ -0.44
TPM3P9-201ENST00000424846 GALNT14Q96FL9 552 aa12.29□□□□□ -0.44
TPM3P9-201ENST00000424846 RARRES3Q9UL19 164 aa12.29□□□□□ -0.44
TPM3P9-201ENST00000424846 NCKAP5O14513 1909 aa12.28□□□□□ -0.44
TPM3P9-201ENST00000424846 TRBV23-1A0A0A0MS06 115 aa12.28□□□□□ -0.44
TPM3P9-201ENST00000424846 B4GALT1P15291 398 aa12.28□□□□□ -0.44
TPM3P9-201ENST00000424846 SPINK2P20155 84 aa12.28□□□□□ -0.44
TPM3P9-201ENST00000424846 NCMAPQ5T1S8 102 aa12.28□□□□□ -0.44
TPM3P9-201ENST00000424846 ALKBH3Q96Q83 286 aaPredicted RBP12.28□□□□□ -0.44
TPM3P9-201ENST00000424846 MAGT1Q9H0U3 335 aa12.28□□□□□ -0.44
TPM3P9-201ENST00000424846 LUZP4Q9P127 313 aa12.28□□□□□ -0.44
TPM3P9-201ENST00000424846 PUS1Q9Y606 427 aaKnown RBP eCLIP12.28□□□□□ -0.44
TPM3P9-201ENST00000424846 COL6A3P12111 3177 aa12.28□□□□□ -0.44
TPM3P9-201ENST00000424846 NSG1A0A0A6YYJ2 146 aa12.28□□□□□ -0.44
TPM3P9-201ENST00000424846 LY6G6EA0A0G2JKS1 128 aa12.28□□□□□ -0.44
TPM3P9-201ENST00000424846 NKX2-6A6NCS4 301 aa12.28□□□□□ -0.44
TPM3P9-201ENST00000424846 C3orf80F5H4A9 247 aa12.28□□□□□ -0.44
TPM3P9-201ENST00000424846 FBP1P09467 338 aa12.28□□□□□ -0.44
TPM3P9-201ENST00000424846 HOXB1P14653 301 aaPredicted RBP12.28□□□□□ -0.44
TPM3P9-201ENST00000424846 EIF1P41567 113 aaKnown RBP12.28□□□□□ -0.44
TPM3P9-201ENST00000424846 AFF3P51826 1226 aaKnown RBP12.28□□□□□ -0.44
TPM3P9-201ENST00000424846 PCOLCEQ15113 449 aa12.28□□□□□ -0.44
TPM3P9-201ENST00000424846 HSF4Q9ULV5 492 aa12.28□□□□□ -0.44
TPM3P9-201ENST00000424846 ST3GAL6Q9Y274 331 aa12.28□□□□□ -0.44
TPM3P9-201ENST00000424846 U3KQA8 63 aa12.28□□□□□ -0.44
TPM3P9-201ENST00000424846 ZNF727A8MUV8 499 aa12.27□□□□□ -0.44
TPM3P9-201ENST00000424846 ZNF587BE7ETH6 402 aa12.27□□□□□ -0.44
TPM3P9-201ENST00000424846 TERTO14746 1132 aaKnown RBP12.27□□□□□ -0.44
TPM3P9-201ENST00000424846 SYNGR3O43761 229 aa12.27□□□□□ -0.44
TPM3P9-201ENST00000424846 CLN5O75503 358 aa12.27□□□□□ -0.44
TPM3P9-201ENST00000424846 IGHV2-5P01817 119 aa12.27□□□□□ -0.44
TPM3P9-201ENST00000424846 NPBWR2P48146 333 aa12.27□□□□□ -0.44
TPM3P9-201ENST00000424846 POLR2GP62487 172 aaKnown RBP eCLIP12.27□□□□□ -0.44
TPM3P9-201ENST00000424846 HAGHQ16775 308 aa12.27□□□□□ -0.44
TPM3P9-201ENST00000424846 CALHM1Q8IU99 346 aa12.27□□□□□ -0.44
TPM3P9-201ENST00000424846 ZNF561Q8N587 486 aa12.27□□□□□ -0.44
TPM3P9-201ENST00000424846 TMEM171Q8WVE6 324 aa12.27□□□□□ -0.44
TPM3P9-201ENST00000424846 SPTSSAQ969W0 71 aa12.27□□□□□ -0.44
TPM3P9-201ENST00000424846 SLAMF9Q96A28 289 aa12.27□□□□□ -0.44
TPM3P9-201ENST00000424846 CCDC74BQ96LY2 380 aa12.27□□□□□ -0.44
TPM3P9-201ENST00000424846 HS3ST6Q96QI5 342 aa12.27□□□□□ -0.44
TPM3P9-201ENST00000424846 SEBOXQ9HB31 216 aaPredicted RBP12.27□□□□□ -0.44
TPM3P9-201ENST00000424846 CRLF2Q9HC73 371 aa12.27□□□□□ -0.44
TPM3P9-201ENST00000424846 KIAA1549Q9HCM3 1950 aa12.27□□□□□ -0.44
TPM3P9-201ENST00000424846 TRAV20A0A0B4J274 112 aa12.27□□□□□ -0.45
TPM3P9-201ENST00000424846 A0A0G2JMM0 328 aa12.27□□□□□ -0.45
TPM3P9-201ENST00000424846 A0A1W2PPB8 328 aa12.27□□□□□ -0.45
TPM3P9-201ENST00000424846 A0A1W2PRS3 328 aa12.27□□□□□ -0.45
TPM3P9-201ENST00000424846 IGSF23A1L1A6 192 aa12.27□□□□□ -0.45
TPM3P9-201ENST00000424846 KIR3DP1A8MWS1 328 aa12.27□□□□□ -0.45
TPM3P9-201ENST00000424846 K7N7A8 449 aa12.27□□□□□ -0.45
TPM3P9-201ENST00000424846 ZNF32P17041 273 aa12.27□□□□□ -0.45
TPM3P9-201ENST00000424846 ECI1P42126 302 aa12.27□□□□□ -0.45
TPM3P9-201ENST00000424846 GLP1RP43220 463 aa12.27□□□□□ -0.45
TPM3P9-201ENST00000424846 S100A12P80511 92 aa12.27□□□□□ -0.45
TPM3P9-201ENST00000424846 EWSR1Q01844 656 aaKnown RBP eCLIP12.27□□□□□ -0.45
TPM3P9-201ENST00000424846 PPA1Q15181 289 aa12.27□□□□□ -0.45
TPM3P9-201ENST00000424846 RNF212Q495C1 297 aa12.27□□□□□ -0.45
TPM3P9-201ENST00000424846 EDARADDQ8WWZ3 215 aa12.27□□□□□ -0.45
TPM3P9-201ENST00000424846 BORCS7-ASMTA0A0B4J1R7 106 aa12.27□□□□□ -0.45
TPM3P9-201ENST00000424846 CEBPGP53567 150 aa12.27□□□□□ -0.45
TPM3P9-201ENST00000424846 RPS23P62266 143 aaKnown RBP12.27□□□□□ -0.45
TPM3P9-201ENST00000424846 ZNF92Q03936 586 aa12.27□□□□□ -0.45
TPM3P9-201ENST00000424846 ARL6IP1Q15041 203 aa12.27□□□□□ -0.45
TPM3P9-201ENST00000424846 MAML2Q8IZL2 1156 aaPredicted RBP12.27□□□□□ -0.45
TPM3P9-201ENST00000424846 ZFP62Q8NB50 900 aaPredicted RBP12.27□□□□□ -0.45
TPM3P9-201ENST00000424846 BORCS8Q96FH0 119 aa12.27□□□□□ -0.45
TPM3P9-201ENST00000424846 TAAR9Q96RI9 348 aa12.27□□□□□ -0.45
TPM3P9-201ENST00000424846 ST8SIA3O43173 380 aa12.26□□□□□ -0.45
TPM3P9-201ENST00000424846 RD3LP0DJH9 198 aa12.26□□□□□ -0.45
TPM3P9-201ENST00000424846 LIFP15018 202 aa12.26□□□□□ -0.45
TPM3P9-201ENST00000424846 EPHA1P21709 976 aa12.26□□□□□ -0.45
TPM3P9-201ENST00000424846 IGFBP4P22692 258 aa12.26□□□□□ -0.45
TPM3P9-201ENST00000424846 DUSP1P28562 367 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms