RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 C22orf15Q8WYQ4 148 aa8.05□□□□□ -1.12
HERC3-204ENST00000422770 PP6455Q8WZ26 134 aa8.05□□□□□ -1.12
HERC3-204ENST00000422770 AQP3Q92482 292 aa8.05□□□□□ -1.12
HERC3-204ENST00000422770 PHYHIPQ92561 330 aa8.05□□□□□ -1.12
HERC3-204ENST00000422770 SPACA5Q96QH8 159 aa8.05□□□□□ -1.12
HERC3-204ENST00000422770 SMURF1Q9HCE7 757 aa8.05□□□□□ -1.12
HERC3-204ENST00000422770 NLKQ9UBE8 527 aa8.05□□□□□ -1.12
HERC3-204ENST00000422770 DUX4Q9UBX2 424 aa8.05□□□□□ -1.12
HERC3-204ENST00000422770 OR14J1Q9UGF5 321 aa8.05□□□□□ -1.12
HERC3-204ENST00000422770 AK6Q9Y3D8 172 aaKnown RBP8.05□□□□□ -1.12
HERC3-204ENST00000422770 INSIG2Q9Y5U4 225 aa8.05□□□□□ -1.12
HERC3-204ENST00000422770 TRAV1-2A0A0B4J238 106 aa8.04□□□□□ -1.12
HERC3-204ENST00000422770 OR2AT4A6NND4 320 aa8.04□□□□□ -1.12
HERC3-204ENST00000422770 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.04□□□□□ -1.12
HERC3-204ENST00000422770 FSTL3O95633 263 aa8.04□□□□□ -1.12
HERC3-204ENST00000422770 CYB5AP00167 134 aa8.04□□□□□ -1.12
HERC3-204ENST00000422770 SELLP14151 372 aa8.04□□□□□ -1.12
HERC3-204ENST00000422770 IGFBP3P17936 291 aaPredicted RBP8.04□□□□□ -1.12
HERC3-204ENST00000422770 ATF1P18846 271 aa8.04□□□□□ -1.12
HERC3-204ENST00000422770 CPT2P23786 658 aa8.04□□□□□ -1.12
HERC3-204ENST00000422770 FUT6P51993 359 aa8.04□□□□□ -1.12
HERC3-204ENST00000422770 ATP1B3P54709 279 aa8.04□□□□□ -1.12
HERC3-204ENST00000422770 SNU13P55769 128 aaKnown RBP8.04□□□□□ -1.12
HERC3-204ENST00000422770 IL13RA1P78552 427 aa8.04□□□□□ -1.12
HERC3-204ENST00000422770 UBE2V2Q15819 145 aa8.04□□□□□ -1.12
HERC3-204ENST00000422770 TMEM42Q69YG0 159 aa8.04□□□□□ -1.12
HERC3-204ENST00000422770 SFXN4Q6P4A7 337 aa8.04□□□□□ -1.12
HERC3-204ENST00000422770 Q6ZSR3 168 aa8.04□□□□□ -1.12
HERC3-204ENST00000422770 BTN2A1Q7KYR7 527 aa8.04□□□□□ -1.12
HERC3-204ENST00000422770 LRRTM1Q86UE6 522 aa8.04□□□□□ -1.12
HERC3-204ENST00000422770 SERPINA12Q8IW75 414 aa8.04□□□□□ -1.12
HERC3-204ENST00000422770 FGFRL1Q8N441 504 aa8.04□□□□□ -1.12
HERC3-204ENST00000422770 OR5D18Q8NGL1 313 aa8.04□□□□□ -1.12
HERC3-204ENST00000422770 DYNC2LI1Q8TCX1 351 aa8.04□□□□□ -1.12
HERC3-204ENST00000422770 SLAMF9Q96A28 289 aa8.04□□□□□ -1.12
HERC3-204ENST00000422770 C10orf35Q96D05 121 aa8.04□□□□□ -1.12
HERC3-204ENST00000422770 DGCR14Q96DF8 476 aaKnown RBP8.04□□□□□ -1.12
HERC3-204ENST00000422770 GPER1Q99527 375 aa8.04□□□□□ -1.12
HERC3-204ENST00000422770 PCGF1Q9BSM1 259 aa8.04□□□□□ -1.12
HERC3-204ENST00000422770 PLGRKTQ9HBL7 147 aa8.04□□□□□ -1.12
HERC3-204ENST00000422770 ONECUT1Q9UBC0 465 aa8.04□□□□□ -1.12
HERC3-204ENST00000422770 FOXJ3Q9UPW0 622 aa8.04□□□□□ -1.12
HERC3-204ENST00000422770 JMJD1CQ15652 2540 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 TRAV40A0A0B4J280 105 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 PPIAL4CA0A0B4J2A2 164 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 A0A0G2JK05 382 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 A0A1W2PQ09 198 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 RNF212BA8MTL3 300 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 C22orf46C9J442 243 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 MAGEB3O15480 346 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 SPRY1O43609 319 aaPredicted RBP8.03□□□□□ -1.12
HERC3-204ENST00000422770 TCF21O43680 179 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 ZNF182P17025 639 aaPredicted RBP8.03□□□□□ -1.12
HERC3-204ENST00000422770 SRMP19623 302 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 PRKACBP22694 351 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 SOX6P35712 828 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 CFHR2P36980 270 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 CEBPDP49716 269 aaPredicted RBP8.03□□□□□ -1.12
HERC3-204ENST00000422770 RBP2P50120 134 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 MTCP1P56278 107 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 FGF12P61328 243 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 P2RY14Q15391 338 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 RAB11BQ15907 218 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 FAM76BQ5HYJ3 339 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 METTL11BQ5VVY1 283 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 STUMQ69YW2 141 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 ZNF841Q6ZN19 808 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 ACP7Q6ZNF0 438 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 C1orf229Q6ZS94 237 aaPredicted RBP8.03□□□□□ -1.12
HERC3-204ENST00000422770 SLC25A26Q70HW3 274 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 UTS2BQ765I0 119 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 NR2C2APQ86WQ0 139 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 CALHM1Q8IU99 346 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 PNLDC1Q8NA58 520 aaKnown RBP8.03□□□□□ -1.12
HERC3-204ENST00000422770 POC1AQ8NBT0 407 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 OR5D14Q8NGL3 314 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 LGALS14Q8TCE9 139 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 ZNF418Q8TF45 676 aaPredicted RBP8.03□□□□□ -1.12
HERC3-204ENST00000422770 SPSB1Q96BD6 273 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 CPNE2Q96FN4 548 aaPredicted RBP8.03□□□□□ -1.12
HERC3-204ENST00000422770 MED30Q96HR3 178 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 CEP19Q96LK0 163 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 GAFA1Q96PS6 74 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 GFI1Q99684 422 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 SLC6A7Q99884 636 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 MS4A7Q9GZW8 240 aaPredicted RBP8.03□□□□□ -1.12
HERC3-204ENST00000422770 KCNK15Q9H427 330 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 ELL3Q9HB65 397 aaPredicted RBP8.03□□□□□ -1.12
HERC3-204ENST00000422770 TMEM138Q9NPI0 162 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 PTTG2Q9NZH5 202 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 SLC25A10Q9UBX3 287 aaPredicted RBP8.03□□□□□ -1.12
HERC3-204ENST00000422770 DAPK2Q9UIK4 370 aa8.03□□□□□ -1.12
HERC3-204ENST00000422770 POLR3KQ9Y2Y1 108 aaPredicted RBP8.03□□□□□ -1.12
HERC3-204ENST00000422770 IGKV1D-17A0A075B6S4 117 aa8.02□□□□□ -1.13
HERC3-204ENST00000422770 IGKV1-27A0A075B6S5 117 aa8.02□□□□□ -1.13
HERC3-204ENST00000422770 A0A0B4J203 849 aa8.02□□□□□ -1.13
HERC3-204ENST00000422770 IGKV1-9A0A0C4DH69 117 aa8.02□□□□□ -1.13
HERC3-204ENST00000422770 RFPL4AA6NLU0 287 aa8.02□□□□□ -1.13
HERC3-204ENST00000422770 NOTOA8MTQ0 251 aa8.02□□□□□ -1.13
HERC3-204ENST00000422770 RFPL4AL1F8VTS6 287 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms