RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 PARLQ9H300 379 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 OR51M1Q9H341 326 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 TUBA4BQ9H853 241 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 BEX1Q9HBH7 125 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 LHX9Q9NQ69 397 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 SMCO4Q9NRQ5 59 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 TMEM100Q9NV29 134 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 UQCC1Q9NVA1 299 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 SLC2A8Q9NY64 477 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 CKLFQ9UBR5 152 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 OR5V1Q9UGF6 321 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 TAC3Q9UHF0 121 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 SHPKQ9UHJ6 478 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 GNG8Q9UK08 70 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 CES1P1Q9UKY3 287 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 CLEC4AQ9UMR7 237 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 TMED7Q9Y3B3 224 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 AK6Q9Y3D8 172 aaKnown RBP2.17□□□□□ -2.06
VPS41-206ENST00000418457 WIF1Q9Y5W5 379 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 HEBP2Q9Y5Z4 205 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 SPACA6W5XKT8 324 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 PRUNE2Q8WUY3 3088 aa2.17□□□□□ -2.06
VPS41-206ENST00000418457 VCANP13611 3396 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 HEATR5BQ9P2D3 2071 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 IGHV4-30-2A0A087WSY4 118 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 TRBV6-7A0A0A0MS04 114 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 TRAV14DV4A0A0A6YYC5 116 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 A0A0B4J2E0 115 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 IGHV3-20A0A0C4DH32 117 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 A0A0U1RQK1 487 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 C13orf42A0A1B0GVH6 325 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 A0A1B0GX12 115 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 A0A1W2PPV9 198 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 ZNF320A2RRD8 509 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 IGLON5A6NGN9 336 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 TVP23AA6NH52 213 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 A6NIN4 97 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 EFCAB7A8K855 629 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 C2orf74A8MZ97 194 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 ZNF736B4DX44 427 aaPredicted RBP2.16□□□□□ -2.06
VPS41-206ENST00000418457 LMO7DNF2Z398 122 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 M0R296 226 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 GPR31O00270 319 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 MFNGO00587 321 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 SLC17A2O00624 439 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 PIN1P1O15428 100 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 NUPL2O15504 423 aaKnown RBP2.16□□□□□ -2.06
VPS41-206ENST00000418457 ERI3O43414 337 aaKnown RBP2.16□□□□□ -2.06
VPS41-206ENST00000418457 TNFSF12O43508 249 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 SGCEO43556 437 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 SSX5O60225 188 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 FCMRO60667 390 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 EIF1BO60739 113 aaKnown RBP2.16□□□□□ -2.06
VPS41-206ENST00000418457 CRLF1O75462 422 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 CTAG2O75638 210 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 LYPD3O95274 346 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 SIX6O95475 246 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 RAB3DO95716 219 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 TXNDC12O95881 172 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 CYB5AP00167 134 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 HLA-AP01891 365 aaKnown RBP2.16□□□□□ -2.06
VPS41-206ENST00000418457 MT-ND4LP03901 98 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 CD3DP04234 171 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 CD2P06729 351 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 FCER2P06734 321 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 MRPL3P09001 348 aaKnown RBP2.16□□□□□ -2.06
VPS41-206ENST00000418457 SLC35G6P0C7Q6 338 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 ZNF806P0C7X5 589 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 CD37P11049 281 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 PNMTP11086 282 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 SLC2A1P11166 492 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 CD79AP11912 226 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 ABOP16442 354 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 AK4P27144 223 aaPredicted RBP2.16□□□□□ -2.06
VPS41-206ENST00000418457 PSMB6P28072 239 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 EIF1P41567 113 aaKnown RBP2.16□□□□□ -2.06
VPS41-206ENST00000418457 PPICP45877 212 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 ARRB1P49407 418 aaPredicted RBP2.16□□□□□ -2.06
VPS41-206ENST00000418457 CSNK1EP49674 416 aaKnown RBP2.16□□□□□ -2.06
VPS41-206ENST00000418457 RAB5CP51148 216 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 CAV2P51636 162 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 CCL23P55773 120 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 STARD6P59095 220 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 RAB4BP61018 213 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 UBE2IP63279 158 aaKnown RBP2.16□□□□□ -2.06
VPS41-206ENST00000418457 PAX8Q06710 450 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 ECH1Q13011 328 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 PDZK1IP1Q13113 114 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 DHRS2Q13268 280 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 SERTAD2Q14140 314 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 SMCO1Q147U7 214 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 ELOCQ15369 112 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 RHEBQ15382 184 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 ZNHIT3Q15649 155 aaPredicted RBP2.16□□□□□ -2.06
VPS41-206ENST00000418457 RAB11BQ15907 218 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 ACKR1Q16570 336 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 ACTBL2Q562R1 376 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 LY6G6FQ5SQ64 297 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 ZNF684Q5T5D7 378 aa2.16□□□□□ -2.06
VPS41-206ENST00000418457 MRPL2Q5T653 305 aaKnown RBP2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms