RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 UBE2UQ5VVX9 321 aa10.33□□□□□ -0.76
SKA1-203ENST00000417656 CD276Q5ZPR3 534 aa10.33□□□□□ -0.76
SKA1-203ENST00000417656 FIP1L1Q6UN15 594 aaKnown RBP10.33□□□□□ -0.76
SKA1-203ENST00000417656 UNQ9370/PRO34162Q6UXP9 181 aa10.33□□□□□ -0.76
SKA1-203ENST00000417656 C1QL2Q7Z5L3 287 aa10.33□□□□□ -0.76
SKA1-203ENST00000417656 CEACAM19Q7Z692 300 aa10.33□□□□□ -0.76
SKA1-203ENST00000417656 ZSCAN4Q8NAM6 433 aaPredicted RBP10.33□□□□□ -0.76
SKA1-203ENST00000417656 OR10K1Q8NGX5 313 aa10.33□□□□□ -0.76
SKA1-203ENST00000417656 MRI1Q9BV20 369 aa10.33□□□□□ -0.76
SKA1-203ENST00000417656 HMG20AQ9NP66 347 aa10.33□□□□□ -0.76
SKA1-203ENST00000417656 RPUSD1Q9UJJ7 312 aaKnown RBP10.33□□□□□ -0.76
SKA1-203ENST00000417656 FOXJ3Q9UPW0 622 aa10.33□□□□□ -0.76
SKA1-203ENST00000417656 SF3B6Q9Y3B4 125 aaKnown RBP10.33□□□□□ -0.76
SKA1-203ENST00000417656 LRRC42Q9Y546 428 aa10.33□□□□□ -0.76
SKA1-203ENST00000417656 CDRT1O95170 752 aa10.32□□□□□ -0.76
SKA1-203ENST00000417656 HAND1O96004 215 aa10.32□□□□□ -0.76
SKA1-203ENST00000417656 UCHL1P09936 223 aa10.32□□□□□ -0.76
SKA1-203ENST00000417656 SRD5A1P18405 259 aa10.32□□□□□ -0.76
SKA1-203ENST00000417656 PSMA1P25786 263 aaKnown RBP10.32□□□□□ -0.76
SKA1-203ENST00000417656 GABRA5P31644 462 aa10.32□□□□□ -0.76
SKA1-203ENST00000417656 RIPPLY3P57055 190 aa10.32□□□□□ -0.76
SKA1-203ENST00000417656 FABP5Q01469 135 aa10.32□□□□□ -0.76
SKA1-203ENST00000417656 COL10A1Q03692 680 aa10.32□□□□□ -0.76
SKA1-203ENST00000417656 PAX8Q06710 450 aa10.32□□□□□ -0.76
SKA1-203ENST00000417656 HSD17B12Q53GQ0 312 aa10.32□□□□□ -0.76
SKA1-203ENST00000417656 TMEM91Q6ZNR0 172 aa10.32□□□□□ -0.76
SKA1-203ENST00000417656 ZNF561Q8N587 486 aa10.32□□□□□ -0.76
SKA1-203ENST00000417656 JAGN1Q8N5M9 183 aa10.32□□□□□ -0.76
SKA1-203ENST00000417656 NKAIN3Q8N8D7 197 aa10.32□□□□□ -0.76
SKA1-203ENST00000417656 ASCC1Q8N9N2 400 aaKnown RBP10.32□□□□□ -0.76
SKA1-203ENST00000417656 PNLDC1Q8NA58 520 aaKnown RBP10.32□□□□□ -0.76
SKA1-203ENST00000417656 PXT1Q8NFP0 134 aa10.32□□□□□ -0.76
SKA1-203ENST00000417656 FCGR1BQ92637 280 aa10.32□□□□□ -0.76
SKA1-203ENST00000417656 DCTN5Q9BTE1 182 aa10.32□□□□□ -0.76
SKA1-203ENST00000417656 PPIL3Q9H2H8 161 aaKnown RBP10.32□□□□□ -0.76
SKA1-203ENST00000417656 NDUFB11Q9NX14 153 aa10.32□□□□□ -0.76
SKA1-203ENST00000417656 GSTK1Q9Y2Q3 226 aa10.32□□□□□ -0.76
SKA1-203ENST00000417656 AUP1Q9Y679 476 aa10.32□□□□□ -0.76
SKA1-203ENST00000417656 SETD2Q9BYW2 2564 aaPredicted RBP10.32□□□□□ -0.76
SKA1-203ENST00000417656 NAV3Q8IVL0 2385 aa10.32□□□□□ -0.76
SKA1-203ENST00000417656 KIR2DS1A0A191URI9 304 aa10.31□□□□□ -0.76
SKA1-203ENST00000417656 ECDO95905 644 aaPredicted RBP10.31□□□□□ -0.76
SKA1-203ENST00000417656 FSHBP01225 129 aa10.31□□□□□ -0.76
SKA1-203ENST00000417656 FAM157CP0CG43 387 aa10.31□□□□□ -0.76
SKA1-203ENST00000417656 PTGFRP43088 359 aa10.31□□□□□ -0.76
SKA1-203ENST00000417656 MTNR1BP49286 362 aa10.31□□□□□ -0.76
SKA1-203ENST00000417656 CAV3P56539 151 aa10.31□□□□□ -0.76
SKA1-203ENST00000417656 FGF12P61328 243 aa10.31□□□□□ -0.76
SKA1-203ENST00000417656 RSU1Q15404 277 aa10.31□□□□□ -0.76
SKA1-203ENST00000417656 TRAM1Q15629 374 aa10.31□□□□□ -0.76
SKA1-203ENST00000417656 NEDD8Q15843 81 aa10.31□□□□□ -0.76
SKA1-203ENST00000417656 SPIN3Q5JUX0 258 aa10.31□□□□□ -0.76
SKA1-203ENST00000417656 LRRTM1Q86UE6 522 aa10.31□□□□□ -0.76
SKA1-203ENST00000417656 MUL1Q969V5 352 aa10.31□□□□□ -0.76
SKA1-203ENST00000417656 POM121Q96HA1 1249 aa10.31□□□□□ -0.76
SKA1-203ENST00000417656 CNTD2Q9H8S5 307 aa10.31□□□□□ -0.76
SKA1-203ENST00000417656 TCF7L1Q9HCS4 588 aa10.31□□□□□ -0.76
SKA1-203ENST00000417656 EXOSC4Q9NPD3 245 aaKnown RBP10.31□□□□□ -0.76
SKA1-203ENST00000417656 C2CD3Q4AC94 2353 aa10.31□□□□□ -0.76
SKA1-203ENST00000417656 TRAV40A0A0B4J280 105 aa10.3□□□□□ -0.76
SKA1-203ENST00000417656 A0A1W2PQ09 198 aa10.3□□□□□ -0.76
SKA1-203ENST00000417656 TMEM82A0PJX8 343 aa10.3□□□□□ -0.76
SKA1-203ENST00000417656 SIRPB1O00241 398 aa10.3□□□□□ -0.76
SKA1-203ENST00000417656 CCRL2O00421 344 aa10.3□□□□□ -0.76
SKA1-203ENST00000417656 GPR37O15354 613 aa10.3□□□□□ -0.76
SKA1-203ENST00000417656 ZNF737O75373 536 aa10.3□□□□□ -0.76
SKA1-203ENST00000417656 HTR3BO95264 441 aa10.3□□□□□ -0.76
SKA1-203ENST00000417656 TNFAIP8O95379 198 aa10.3□□□□□ -0.76
SKA1-203ENST00000417656 TK1P04183 234 aa10.3□□□□□ -0.76
SKA1-203ENST00000417656 CHRM2P08172 466 aa10.3□□□□□ -0.76
SKA1-203ENST00000417656 SERPINA2P20848 420 aa10.3□□□□□ -0.76
SKA1-203ENST00000417656 ZNF146Q15072 292 aa10.3□□□□□ -0.76
SKA1-203ENST00000417656 C11orf91Q3C1V1 193 aa10.3□□□□□ -0.76
SKA1-203ENST00000417656 AWAT2Q6E213 333 aa10.3□□□□□ -0.76
SKA1-203ENST00000417656 ASCL4Q6XD76 172 aa10.3□□□□□ -0.76
SKA1-203ENST00000417656 FAM185AQ8N0U4 392 aa10.3□□□□□ -0.76
SKA1-203ENST00000417656 C8orf46Q8TAG6 207 aa10.3□□□□□ -0.76
SKA1-203ENST00000417656 PHYHIPQ92561 330 aa10.3□□□□□ -0.76
SKA1-203ENST00000417656 CHST6Q9GZX3 395 aa10.3□□□□□ -0.76
SKA1-203ENST00000417656 RHOFQ9HBH0 211 aa10.3□□□□□ -0.76
SKA1-203ENST00000417656 C19orf12Q9NSK7 152 aa10.3□□□□□ -0.76
SKA1-203ENST00000417656 ONECUT1Q9UBC0 465 aa10.3□□□□□ -0.76
SKA1-203ENST00000417656 ING4Q9UNL4 249 aa10.3□□□□□ -0.76
SKA1-203ENST00000417656 MRPS28Q9Y2Q9 187 aaKnown RBP10.3□□□□□ -0.76
SKA1-203ENST00000417656 IGHV3OR16-10A0A075B7F0 116 aa10.29□□□□□ -0.76
SKA1-203ENST00000417656 A0A1W2PP11 408 aa10.29□□□□□ -0.76
SKA1-203ENST00000417656 K7N7A8 449 aa10.29□□□□□ -0.76
SKA1-203ENST00000417656 PSPNO60542 156 aa10.29□□□□□ -0.76
SKA1-203ENST00000417656 OR2H2O95918 312 aa10.29□□□□□ -0.76
SKA1-203ENST00000417656 PPIAL4GP0DN37 164 aa10.29□□□□□ -0.76
SKA1-203ENST00000417656 ZNF44P15621 663 aa10.29□□□□□ -0.76
SKA1-203ENST00000417656 GABRR1P24046 479 aa10.29□□□□□ -0.76
SKA1-203ENST00000417656 BMXP51813 675 aa10.29□□□□□ -0.76
SKA1-203ENST00000417656 EDDM3AQ14507 147 aa10.29□□□□□ -0.76
SKA1-203ENST00000417656 PDCD1Q15116 288 aa10.29□□□□□ -0.76
SKA1-203ENST00000417656 PIGYQ3MUY2 71 aa10.29□□□□□ -0.76
SKA1-203ENST00000417656 SLC22A6Q4U2R8 563 aa10.29□□□□□ -0.76
SKA1-203ENST00000417656 KLF17Q5JT82 389 aaPredicted RBP10.29□□□□□ -0.76
SKA1-203ENST00000417656 ELP2Q6IA86 826 aa10.29□□□□□ -0.76
SKA1-203ENST00000417656 C17orf107Q6ZR85 190 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms