RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 TREM2Q9NZC2 230 aa11.12□□□□□ -0.63
CNN3-203ENST00000415017 RCC2Q9P258 522 aaKnown RBP11.12□□□□□ -0.63
CNN3-203ENST00000415017 IL36RNQ9UBH0 155 aa11.12□□□□□ -0.63
CNN3-203ENST00000415017 KAAG1Q9UBP8 84 aa11.12□□□□□ -0.63
CNN3-203ENST00000415017 PPIAL4AQ9Y536 164 aa11.12□□□□□ -0.63
CNN3-203ENST00000415017 AKAP9Q99996 3911 aa11.12□□□□□ -0.63
CNN3-203ENST00000415017 CSMD1Q96PZ7 3565 aa11.11□□□□□ -0.63
CNN3-203ENST00000415017 hCG_1807616A0A1W2PRN6 198 aa11.11□□□□□ -0.63
CNN3-203ENST00000415017 OOEPA6NGQ2 149 aa11.11□□□□□ -0.63
CNN3-203ENST00000415017 NDUFS8O00217 210 aa11.11□□□□□ -0.63
CNN3-203ENST00000415017 CRTAPO75718 401 aaPredicted RBP11.11□□□□□ -0.63
CNN3-203ENST00000415017 NXPH2O95156 264 aa11.11□□□□□ -0.63
CNN3-203ENST00000415017 CSTBP04080 98 aaKnown RBP11.11□□□□□ -0.63
CNN3-203ENST00000415017 PSG2P11465 335 aa11.11□□□□□ -0.63
CNN3-203ENST00000415017 SERPINA2P20848 420 aa11.11□□□□□ -0.63
CNN3-203ENST00000415017 DNASE1P24855 282 aa11.11□□□□□ -0.63
CNN3-203ENST00000415017 TMEM50BP56557 158 aa11.11□□□□□ -0.63
CNN3-203ENST00000415017 FAM189A2Q15884 450 aa11.11□□□□□ -0.63
CNN3-203ENST00000415017 MPV17LQ2QL34 196 aa11.11□□□□□ -0.63
CNN3-203ENST00000415017 SMIM21Q3B7S5 101 aa11.11□□□□□ -0.63
CNN3-203ENST00000415017 UBE2NLQ5JXB2 153 aa11.11□□□□□ -0.63
CNN3-203ENST00000415017 FAM201AQ5SY85 155 aa11.11□□□□□ -0.63
CNN3-203ENST00000415017 MZT2AQ6P582 158 aa11.11□□□□□ -0.63
CNN3-203ENST00000415017 KRTAP1-3Q8IUG1 177 aa11.11□□□□□ -0.63
CNN3-203ENST00000415017 OR6Q1Q8NGQ2 317 aa11.11□□□□□ -0.63
CNN3-203ENST00000415017 C10orf105Q8TEF2 133 aa11.11□□□□□ -0.63
CNN3-203ENST00000415017 RAB40AQ8WXH6 277 aa11.11□□□□□ -0.63
CNN3-203ENST00000415017 EMG1Q92979 244 aaKnown RBP11.11□□□□□ -0.63
CNN3-203ENST00000415017 SDSLQ96GA7 329 aa11.11□□□□□ -0.63
CNN3-203ENST00000415017 SOSTQ9BQB4 213 aa11.11□□□□□ -0.63
CNN3-203ENST00000415017 TMEM59Q9BXS4 323 aa11.11□□□□□ -0.63
CNN3-203ENST00000415017 BANF2Q9H503 90 aa11.11□□□□□ -0.63
CNN3-203ENST00000415017 NLKQ9UBE8 527 aa11.11□□□□□ -0.63
CNN3-203ENST00000415017 COMMD3Q9UBI1 195 aa11.11□□□□□ -0.63
CNN3-203ENST00000415017 ST3GAL6Q9Y274 331 aa11.11□□□□□ -0.63
CNN3-203ENST00000415017 A0A0A6YYH2 397 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 A6NJ64 397 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 OR2AT4A6NND4 320 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 CLDN25C9JDP6 229 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 GEMIN2O14893 280 aaKnown RBP11.1□□□□□ -0.63
CNN3-203ENST00000415017 ZNF737O75373 536 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 CLPXO76031 633 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 TPPPO94811 219 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 MPIG6BO95866 241 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 GLAP06280 429 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 EIF4EP06730 217 aaKnown RBP11.1□□□□□ -0.63
CNN3-203ENST00000415017 CHRM2P08172 466 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 CSF3P09919 207 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 IRF2P14316 349 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 PRKACAP17612 351 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 ELK1P19419 428 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 CD80P33681 288 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 MNDAP41218 407 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 ART1P52961 327 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 ATP5J2P56134 94 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 BTG1P62324 171 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 PAX5Q02548 391 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 PIGYQ3MUY2 71 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 TMEM155Q4W5P6 130 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 PRSS57Q6UWY2 283 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 ZNF788Q6ZQV5 615 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 CMTM4Q8IZR5 234 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 CD177Q8N6Q3 437 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 ZNF525Q8N782 197 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 SAMD12Q8N8I0 201 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 FAM46BQ96A09 425 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 GAL3ST1Q99999 423 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 NICN1Q9BSH3 213 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 SELENOIQ9C0D9 397 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 ELL3Q9HB65 397 aaPredicted RBP11.1□□□□□ -0.63
CNN3-203ENST00000415017 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.1□□□□□ -0.63
CNN3-203ENST00000415017 ZNF581Q9P0T4 197 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 HSF4Q9ULV5 492 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 WIPI2Q9Y4P8 454 aa11.1□□□□□ -0.63
CNN3-203ENST00000415017 TRAV38-1A0A0B4J264 116 aa11.09□□□□□ -0.63
CNN3-203ENST00000415017 NDUFA2O43678 99 aa11.09□□□□□ -0.63
CNN3-203ENST00000415017 SSX4O60224 188 aa11.09□□□□□ -0.63
CNN3-203ENST00000415017 HPGDSO60760 199 aa11.09□□□□□ -0.63
CNN3-203ENST00000415017 FCN3O75636 299 aa11.09□□□□□ -0.63
CNN3-203ENST00000415017 SCGNO76038 276 aa11.09□□□□□ -0.63
CNN3-203ENST00000415017 CPT2P23786 658 aa11.09□□□□□ -0.63
CNN3-203ENST00000415017 CHATP28329 748 aa11.09□□□□□ -0.63
CNN3-203ENST00000415017 TNFSF8P32971 234 aa11.09□□□□□ -0.63
CNN3-203ENST00000415017 MDH2P40926 338 aaKnown RBP11.09□□□□□ -0.63
CNN3-203ENST00000415017 ETV6P41212 452 aa11.09□□□□□ -0.63
CNN3-203ENST00000415017 DSCR9P59020 149 aa11.09□□□□□ -0.63
CNN3-203ENST00000415017 TAF9Q16594 264 aa11.09□□□□□ -0.63
CNN3-203ENST00000415017 MICBQ29980 383 aa11.09□□□□□ -0.63
CNN3-203ENST00000415017 CCDC190Q86UF4 302 aa11.09□□□□□ -0.63
CNN3-203ENST00000415017 LAX1Q8IWV1 398 aa11.09□□□□□ -0.63
CNN3-203ENST00000415017 BATF2Q8N1L9 274 aa11.09□□□□□ -0.63
CNN3-203ENST00000415017 TMEM246Q9BRR3 403 aa11.09□□□□□ -0.63
CNN3-203ENST00000415017 URM1Q9BTM9 101 aaKnown RBP11.09□□□□□ -0.63
CNN3-203ENST00000415017 PEX16Q9Y5Y5 336 aa11.09□□□□□ -0.63
CNN3-203ENST00000415017 ABCA2Q9BZC7 2435 aa11.08□□□□□ -0.64
CNN3-203ENST00000415017 A0A096LNT2 108 aa11.08□□□□□ -0.64
CNN3-203ENST00000415017 TRAV24A0A0B4J272 114 aa11.08□□□□□ -0.64
CNN3-203ENST00000415017 METTL21EPA6NDL7 271 aa11.08□□□□□ -0.64
CNN3-203ENST00000415017 RFPL4AA6NLU0 287 aa11.08□□□□□ -0.64
CNN3-203ENST00000415017 F5H0A9 414 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms