RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 NEIL2Q969S2 332 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 WBP2Q969T9 261 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 HIST1H2BAQ96A08 127 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 NUS1Q96E22 293 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 DIRAS2Q96HU8 199 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 PYURFQ96I23 114 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 GPR137Q96N19 417 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 GNRHR2Q96P88 292 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 OR52B2Q96RD2 323 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 FCRL5Q96RD9 977 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 NKX3-1Q99801 234 aaPredicted RBP3.43□□□□□ -1.86
LINC01048-201ENST00000414480 LXNQ9BS40 222 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 PBDC1Q9BVG4 233 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 DPCDQ9BVM2 203 aaPredicted RBP3.43□□□□□ -1.86
LINC01048-201ENST00000414480 C1QTNF5Q9BXJ0 243 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 LINC00470Q9BZP3 86 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 OR2J1Q9GZK6 312 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 TMEM126AQ9H061 195 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 TKTL2Q9H0I9 626 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 MOB1AQ9H8S9 216 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 PATZ1Q9HBE1 687 aaKnown RBP3.43□□□□□ -1.86
LINC01048-201ENST00000414480 LRTM1Q9HBL6 345 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 POLD4Q9HCU8 107 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 EXOSC4Q9NPD3 245 aaKnown RBP3.43□□□□□ -1.86
LINC01048-201ENST00000414480 NOX4Q9NPH5 578 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 SPHK2Q9NRA0 654 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 GKN1Q9NS71 199 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 SLC7A10Q9NS82 523 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 ELOVL5Q9NYP7 299 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 B3GAT1Q9P2W7 334 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 MYOTQ9UBF9 498 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 FBLN5Q9UBX5 448 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 ING1Q9UK53 422 aaPredicted RBP3.43□□□□□ -1.86
LINC01048-201ENST00000414480 SLC45A2Q9UMX9 530 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 WSB1Q9Y6I7 421 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 ABCA2Q9BZC7 2435 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 SPENQ96T58 3664 aaKnown RBP3.43□□□□□ -1.86
LINC01048-201ENST00000414480 MYO16Q9Y6X6 1858 aa3.43□□□□□ -1.86
LINC01048-201ENST00000414480 LRBAP50851 2863 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 UTP20O75691 2785 aaKnown RBP3.42□□□□□ -1.86
LINC01048-201ENST00000414480 SPG11Q96JI7 2443 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 A0A0D9SFI3 127 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.42□□□□□ -1.86
LINC01048-201ENST00000414480 TCRBV7S2A1N4TA0A589 114 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 CASTOR2A6NHX0 329 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 C2CD4BA6NLJ0 364 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 YJEFN3A6XGL0 299 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 B4DGG1 531 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 ZNF814B7Z6K7 855 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 D6RAR5 112 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 CHEK1O14757 476 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 FGF16O43320 207 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 DHHO43323 396 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 XRCC3O43542 346 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 HCRTR1O43613 425 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 ZNF207O43670 478 aaKnown RBP3.42□□□□□ -1.86
LINC01048-201ENST00000414480 LDB3O75112 727 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 SEMA4FO95754 770 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 APOA2P02652 100 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 PMP2P02689 132 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 IL6RP08887 468 aaPredicted RBP3.42□□□□□ -1.86
LINC01048-201ENST00000414480 LIMS3P0CW19 117 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 LIMS4P0CW20 117 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 MPC1LP0DKB6 136 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 OR5H8P0DN80 308 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 PAX1P15863 534 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 TAC1P20366 129 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 NTF3P20783 257 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 ZBTB25P24278 435 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 BRS3P32247 399 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 PTGER1P34995 402 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 GLRXP35754 106 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 AMTP48728 403 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 AKR1C2P52895 323 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 CTSCP53634 463 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 SLC18A1P54219 525 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 CLDN20P56880 219 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 LILRA4P59901 499 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 SELENOWP63302 87 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 RPL24P83731 157 aaKnown RBP3.42□□□□□ -1.86
LINC01048-201ENST00000414480 BCL2L1Q07817 233 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 SMAGPQ0VAQ4 97 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 ZNF154Q13106 437 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 PNOCQ13519 176 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 ZNF77Q15935 545 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 C3AR1Q16581 482 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 SRSF7Q16629 238 aaKnown RBP eCLIP3.42□□□□□ -1.86
LINC01048-201ENST00000414480 TBC1D28Q2M2D7 210 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 LRRC75BQ2VPJ9 315 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 SNAI3Q3KNW1 292 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 Q5BKY6 102 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 PRR31Q5SQ13 230 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 LYPLAL1Q5VWZ2 237 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 B3GNTL1Q67FW5 361 aaPredicted RBP3.42□□□□□ -1.86
LINC01048-201ENST00000414480 FAAP20Q6NZ36 180 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 AGTRAPQ6RW13 159 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 SHC4Q6S5L8 630 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 KIRREL2Q6UWL6 708 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 ENPP6Q6UWR7 440 aa3.42□□□□□ -1.86
LINC01048-201ENST00000414480 PLXDC2Q6UX71 529 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms