RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 IL11RAQ14626 422 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 PTCRAQ6ISU1 281 aaPredicted RBP6.6□□□□□ -1.35
PTPN3-203ENST00000412145 TMEM88Q6PEY1 159 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 SIGLEC11Q96RL6 698 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 SSC5DA1L4H1 1573 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 SMIM18P0DKX4 95 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 EPHA8P29322 1005 aaPredicted RBP6.6□□□□□ -1.35
PTPN3-203ENST00000412145 NPBWR2P48146 333 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 SUCLG1P53597 346 aaKnown RBP6.6□□□□□ -1.35
PTPN3-203ENST00000412145 INSM1Q01101 510 aaPredicted RBP6.6□□□□□ -1.35
PTPN3-203ENST00000412145 HES3Q5TGS1 186 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 OR5M1Q8NGP8 315 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 CDKN2AP42771 156 aaKnown RBP6.6□□□□□ -1.35
PTPN3-203ENST00000412145 SNRPEP62304 92 aaKnown RBP6.6□□□□□ -1.35
PTPN3-203ENST00000412145 YRDCQ86U90 279 aaKnown RBP6.6□□□□□ -1.35
PTPN3-203ENST00000412145 GALNT14Q96FL9 552 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 MRGPRX1Q96LB2 322 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 P2RX4Q99571 388 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 DDX60Q8IY21 1712 aaKnown RBP6.6□□□□□ -1.35
PTPN3-203ENST00000412145 TRDCB7Z8K6 153 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 RAC3P60763 192 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 KCNAB1Q14722 419 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 CLLU1OSQ5K130 101 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 FAM78BQ5VT40 261 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 C12orf49Q9H741 205 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.6□□□□□ -1.35
PTPN3-203ENST00000412145 A0A1B0GW15 77 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 CRXO43186 299 aaPredicted RBP6.6□□□□□ -1.35
PTPN3-203ENST00000412145 OPN1LWP04000 364 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 OR4A8P0C604 315 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 GZMHP20718 246 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 TMEM33P57088 247 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 SMUG1Q53HV7 270 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 SYT11Q9BT88 431 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 HCFC1R1Q9NWW0 138 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 PPIL1Q9Y3C6 166 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 TRIP11Q15643 1979 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 WNT9BO14905 357 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 GAPDHP04406 335 aaKnown RBP6.6□□□□□ -1.35
PTPN3-203ENST00000412145 ARSAP15289 507 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 HINT1P49773 126 aaPredicted RBP6.6□□□□□ -1.35
PTPN3-203ENST00000412145 PMP22Q01453 160 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 TMEM99Q8N816 258 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 SF3B5Q9BWJ5 86 aaKnown RBP6.6□□□□□ -1.35
PTPN3-203ENST00000412145 SCN11AQ9UI33 1791 aa6.6□□□□□ -1.35
PTPN3-203ENST00000412145 C9orf170A2RU37 121 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 SLC17A3O00476 420 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 ADAM20O43506 726 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 TAS2R60P59551 318 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 C10orf113Q5VZT2 155 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 GBGT1Q8N5D6 347 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 FOXN4Q96NZ1 517 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 CXXC4Q9H2H0 198 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 HEXA-AS1Q9H8Q6 139 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 IL19Q9UHD0 177 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 A0A1W2PNV4 684 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 CDX4O14627 284 aaPredicted RBP6.59□□□□□ -1.35
PTPN3-203ENST00000412145 PITX3O75364 302 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 NGFP01138 241 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 PSMB5P28074 263 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 CLDN2P57739 230 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 FABP5Q01469 135 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 ISXQ2M1V0 245 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 NRIP2Q9BQI9 281 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 LINC01549A6NIU2 74 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 UBE2L6O14933 153 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 CLEC2LP0C7M8 214 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 GABRG2P18507 467 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 TSPOP30536 169 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 COX20Q5RI15 118 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 MUC20Q8N307 709 aaPredicted RBP6.59□□□□□ -1.35
PTPN3-203ENST00000412145 NUDT10Q8NFP7 164 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 ELOVL1Q9BW60 279 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 OR5AC2Q9NZP5 309 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 STARD10Q9Y365 291 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 RGPD1P0DJD0 1748 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 PITX1P78337 314 aaPredicted RBP6.59□□□□□ -1.35
PTPN3-203ENST00000412145 LINC00303Q3SY05 128 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 LYPD8Q6UX82 237 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 ZNF740Q8NDX6 193 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 MISP3Q96FF7 219 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 FBLL1A6NHQ2 334 aaKnown RBP6.59□□□□□ -1.35
PTPN3-203ENST00000412145 GNG7O60262 68 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 CEACAM6P40199 344 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 KLF3P57682 345 aaPredicted RBP6.59□□□□□ -1.35
PTPN3-203ENST00000412145 COL9A2Q14055 689 aaPredicted RBP6.59□□□□□ -1.35
PTPN3-203ENST00000412145 UBE2V2Q15819 145 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 KCNMB1Q16558 191 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 SLC35E4Q6ICL7 350 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 DEFB123Q8N688 67 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 BHLHE23Q8NDY6 225 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 NEUROG1Q92886 237 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 TRMT61AQ96FX7 289 aaKnown RBP6.59□□□□□ -1.35
PTPN3-203ENST00000412145 SLC46A2Q9BY10 475 aa6.59□□□□□ -1.35
PTPN3-203ENST00000412145 A0A087WUJ7 227 aa6.59□□□□□ -1.36
PTPN3-203ENST00000412145 DIRC3C9JPN6 131 aa6.59□□□□□ -1.36
PTPN3-203ENST00000412145 NXPH3O95157 252 aa6.59□□□□□ -1.36
PTPN3-203ENST00000412145 TMEM136Q6ZRR5 245 aa6.59□□□□□ -1.36
PTPN3-203ENST00000412145 SHISA6Q6ZSJ9 500 aa6.59□□□□□ -1.36
PTPN3-203ENST00000412145 BVESQ8NE79 360 aa6.59□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms