RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 CCDC54Q8NEL0 328 aa9.42□□□□□ -0.9
LINC00963-201ENST00000412141 OR52N4Q8NGI2 321 aa9.42□□□□□ -0.9
LINC00963-201ENST00000412141 C9orf16Q9BUW7 83 aa9.42□□□□□ -0.9
LINC00963-201ENST00000412141 ALG8Q9BVK2 526 aa9.42□□□□□ -0.9
LINC00963-201ENST00000412141 FAM234AQ9H0X4 552 aa9.42□□□□□ -0.9
LINC00963-201ENST00000412141 S100A14Q9HCY8 104 aa9.42□□□□□ -0.9
LINC00963-201ENST00000412141 HHLA2Q9UM44 414 aa9.42□□□□□ -0.9
LINC00963-201ENST00000412141 GSTK1Q9Y2Q3 226 aa9.42□□□□□ -0.9
LINC00963-201ENST00000412141 SNTNA6NMZ2 147 aa9.41□□□□□ -0.9
LINC00963-201ENST00000412141 OR4C45A6NMZ5 311 aa9.41□□□□□ -0.9
LINC00963-201ENST00000412141 E9PI62 339 aa9.41□□□□□ -0.9
LINC00963-201ENST00000412141 M0QZ24 198 aa9.41□□□□□ -0.9
LINC00963-201ENST00000412141 DBTP11182 482 aaKnown RBP9.41□□□□□ -0.9
LINC00963-201ENST00000412141 JUNBP17275 347 aaPredicted RBP9.41□□□□□ -0.9
LINC00963-201ENST00000412141 PRKACBP22694 351 aa9.41□□□□□ -0.9
LINC00963-201ENST00000412141 DLX6P56179 175 aa9.41□□□□□ -0.9
LINC00963-201ENST00000412141 PDZK1IP1Q13113 114 aa9.41□□□□□ -0.9
LINC00963-201ENST00000412141 ALKBH1Q13686 389 aaKnown RBP9.41□□□□□ -0.9
LINC00963-201ENST00000412141 FAM189A2Q15884 450 aa9.41□□□□□ -0.9
LINC00963-201ENST00000412141 SSX2Q16385 188 aa9.41□□□□□ -0.9
LINC00963-201ENST00000412141 SLC25A30Q5SVS4 291 aa9.41□□□□□ -0.9
LINC00963-201ENST00000412141 ASPHD2Q6ICH7 369 aa9.41□□□□□ -0.9
LINC00963-201ENST00000412141 TRAPPC6BQ86SZ2 158 aa9.41□□□□□ -0.9
LINC00963-201ENST00000412141 OR8H2Q8N162 312 aa9.41□□□□□ -0.9
LINC00963-201ENST00000412141 DYNAPQ8N1N2 210 aa9.41□□□□□ -0.9
LINC00963-201ENST00000412141 OR4S1Q8NGB4 309 aa9.41□□□□□ -0.9
LINC00963-201ENST00000412141 FAM110DQ8TAY7 271 aaPredicted RBP9.41□□□□□ -0.9
LINC00963-201ENST00000412141 SNX22Q96L94 193 aa9.41□□□□□ -0.9
LINC00963-201ENST00000412141 OPALINQ96PE5 141 aa9.41□□□□□ -0.9
LINC00963-201ENST00000412141 C16orf95Q9H693 158 aa9.41□□□□□ -0.9
LINC00963-201ENST00000412141 EXOGQ9Y2C4 368 aaKnown RBP9.41□□□□□ -0.9
LINC00963-201ENST00000412141 PRKDCP78527 4128 aaKnown RBP9.41□□□□□ -0.9
LINC00963-201ENST00000412141 IGKV1-12A0A0C4DH73 117 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 LOC100130705A0A1B0GUX0 176 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 C17orf98A8MV24 154 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 E9PQ18 207 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 EBAG9O00559 213 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 TIMM23O14925 209 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 CHST1O43916 411 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 PSPNO60542 156 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 TSPAN9O75954 239 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 CLPXO76031 633 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 TSPAN15O95858 294 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 IGKV1D-12P01611 117 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 GABRB1P18505 474 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 PEX2P28328 305 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 ACTA2P62736 377 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 ACTG2P63267 376 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 GALEQ14376 348 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 LPCAT4Q643R3 524 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 FDX2Q6P4F2 183 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 LHFPL2Q6ZUX7 228 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 UTS2BQ765I0 119 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 TMEM219Q86XT9 240 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 C10orf67Q8IYJ2 551 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 PQLC1Q8N2U9 271 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 DNAAF1Q8NEP3 725 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 OR13D1Q8NGV5 346 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 RHOXF1Q8NHV9 184 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 C10orf35Q96D05 121 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 MRPL48Q96GC5 212 aaKnown RBP9.4□□□□□ -0.9
LINC00963-201ENST00000412141 ZNF714Q96N38 554 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 PDCD1LG2Q9BQ51 273 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 MEGF9Q9H1U4 602 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 FAM118AQ9NWS6 357 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 FOXJ3Q9UPW0 622 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 HILPDAQ9Y5L2 63 aa9.4□□□□□ -0.9
LINC00963-201ENST00000412141 KIAA2026Q5HYC2 2103 aa9.4□□□□□ -0.91
LINC00963-201ENST00000412141 TRBV2A0A0J9YWF9 115 aa9.39□□□□□ -0.91
LINC00963-201ENST00000412141 hADV38S2A0JD32 116 aa9.39□□□□□ -0.91
LINC00963-201ENST00000412141 FAM172BPA6NC97 362 aa9.39□□□□□ -0.91
LINC00963-201ENST00000412141 MMP23AO75900 390 aa9.39□□□□□ -0.91
LINC00963-201ENST00000412141 FADS2O95864 444 aaKnown RBP9.39□□□□□ -0.91
LINC00963-201ENST00000412141 ISG15P05161 165 aa9.39□□□□□ -0.91
LINC00963-201ENST00000412141 HCKP08631 526 aa9.39□□□□□ -0.91
LINC00963-201ENST00000412141 IGHV1-8P0DP01 117 aa9.39□□□□□ -0.91
LINC00963-201ENST00000412141 TMEM225BP0DP42 221 aa9.39□□□□□ -0.91
LINC00963-201ENST00000412141 VSIG10L2P0DP72 767 aa9.39□□□□□ -0.91
LINC00963-201ENST00000412141 ZNF44P15621 663 aa9.39□□□□□ -0.91
LINC00963-201ENST00000412141 SOX2P48431 317 aa9.39□□□□□ -0.91
LINC00963-201ENST00000412141 CCR9P51686 369 aa9.39□□□□□ -0.91
LINC00963-201ENST00000412141 GTF2A1P52655 376 aaPredicted RBP9.39□□□□□ -0.91
LINC00963-201ENST00000412141 HABP2Q14520 560 aaPredicted RBP9.39□□□□□ -0.91
LINC00963-201ENST00000412141 SMN1Q16637 294 aaKnown RBP9.39□□□□□ -0.91
LINC00963-201ENST00000412141 LDLRAD2Q5SZI1 272 aa9.39□□□□□ -0.91
LINC00963-201ENST00000412141 BAIAP2L2Q6UXY1 529 aa9.39□□□□□ -0.91
LINC00963-201ENST00000412141 TCF23Q7RTU1 214 aa9.39□□□□□ -0.91
LINC00963-201ENST00000412141 Q8IYB0 196 aa9.39□□□□□ -0.91
LINC00963-201ENST00000412141 OR52I1Q8NGK6 324 aa9.39□□□□□ -0.91
LINC00963-201ENST00000412141 OR4C13Q8NGP0 309 aa9.39□□□□□ -0.91
LINC00963-201ENST00000412141 NDNFQ8TB73 568 aa9.39□□□□□ -0.91
LINC00963-201ENST00000412141 PIFOQ8TCI5 191 aa9.39□□□□□ -0.91
LINC00963-201ENST00000412141 TSEN15Q8WW01 171 aaKnown RBP9.39□□□□□ -0.91
LINC00963-201ENST00000412141 Q96MT0 163 aa9.39□□□□□ -0.91
LINC00963-201ENST00000412141 NR1H4Q96RI1 486 aaPredicted RBP9.39□□□□□ -0.91
LINC00963-201ENST00000412141 ZCCHC4Q9H5U6 513 aa9.39□□□□□ -0.91
LINC00963-201ENST00000412141 HMG20AQ9NP66 347 aa9.39□□□□□ -0.91
LINC00963-201ENST00000412141 EXOSC4Q9NPD3 245 aaKnown RBP9.39□□□□□ -0.91
LINC00963-201ENST00000412141 ABCB10Q9NRK6 738 aa9.39□□□□□ -0.91
LINC00963-201ENST00000412141 ERVK13-1Q9NX77 482 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms