RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 F5H768 121 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 SLC25A20O43772 301 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 HMMRO75330 724 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR2C1O95371 312 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 C1orf105O95561 183 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 IGHV3-33P01772 117 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 HIST1H2ABP04908 130 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 GUSBP08236 651 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 CSF3P09919 207 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 ASAH2BP0C7U1 165 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 TRGC1P0CF51 173 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 GPR89BP0CG08 455 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 ZNF728P0DKX0 622 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 POU2F1P14859 743 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 SRMP19623 302 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 HIST1H2ADP20671 130 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 TUBG1P23258 451 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 GLRA2P23416 452 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 U2AF2P26368 475 aaKnown RBP eCLIP-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 AKT1P31749 480 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 NUDT2P50583 147 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 NEK2P51955 445 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 PSMC6P62333 389 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 GABPB1Q06547 395 aaPredicted RBP-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 GPS1Q13098 491 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 CEACAM7Q14002 265 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 PTGISQ16647 500 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 UGT3A2Q3SY77 523 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 LRRC37A5PQ49AS3 106 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 PLAG1Q6DJT9 500 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR2T5Q6IEZ7 315 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 C11orf71Q6IPW1 123 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 CBLN3Q6UW01 205 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 DPPA4Q7L190 304 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 HIST3H2AQ7L7L0 130 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 LRRC34Q8IZ02 419 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR4N4Q8N0Y3 316 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 DAW1Q8N136 415 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 LRRC17Q8N6Y2 441 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 NPWQ8N729 165 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 NECAB1Q8N987 351 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR2T29Q8NH02 315 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR56A3Q8NH54 315 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR4S2Q8NH73 311 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 FCGR1BQ92637 280 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 HIST1H2BAQ96A08 127 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 TESCQ96BS2 214 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 SDCCAG3Q96C92 435 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 VMP1Q96GC9 406 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 PYURFQ96I23 114 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 KCNS1Q96KK3 526 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 FAM81BQ96LP2 452 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR2A14Q96R47 310 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR7D2Q96RA2 312 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 ATP5SQ99766 215 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 NCAPGQ9BPX3 1015 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 NUDT22Q9BRQ3 303 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 TMEM246Q9BRR3 403 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 NAT9Q9BTE0 207 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 NUDT9Q9BW91 350 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 NUF2Q9BZD4 464 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 NXF5Q9H1B4 397 aaKnown RBP-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 MED28Q9H204 178 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 SLC38A1Q9H2H9 487 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 MMADHCQ9H3L0 296 aaPredicted RBP-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 PLEKHA2Q9HB19 425 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 MCCC2Q9HCC0 563 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 TMEM138Q9NPI0 162 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 EQTNQ9NQ60 294 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 GLRX2Q9NS18 164 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 GKN1Q9NS71 199 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 QPCTLQ9NXS2 382 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 TAS2R7Q9NYW3 318 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 NDUFA13Q9P0J0 144 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 UBA2Q9UBT2 640 aaPredicted RBP-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 RAB22AQ9UL26 194 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 BTRCQ9Y297 605 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 TP53TG1Q9Y2A0 90 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 SNX24Q9Y343 169 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 SH3GLB1Q9Y371 365 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 CFAP20Q9Y6A4 193 aaKnown RBP-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 CEPT1Q9Y6K0 416 aa-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 DDX49Q9Y6V7 483 aaKnown RBP-2.32□□□□□ -2.78
RNU4-88P-201ENST00000411220 NUP153P49790 1475 aaKnown RBP-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 DLEC1Q9Y238 1755 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 MSH6P52701 1360 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 TRBV20OR9-2A0A075B6H5 130 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 TRAV8-1A0A0A6YYK1 113 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 TRAV17A0A0B4J275 112 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 IGHV1-18A0A0C4DH31 117 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 OR51F1A6NGY5 319 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 TVP23AA6NH52 213 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 CCDC154A6NI56 674 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 SLC9B1P1A6NJY1 282 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 MKRN2OSH3BPM6 223 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 H3BRM9 83 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 M0R296 226 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 UBFD1O14562 309 aaKnown RBP-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 PHYHO14832 338 aa-2.33□□□□□ -2.78
RNU4-88P-201ENST00000411220 CASKO14936 926 aa-2.33□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms