RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 FN3KRPQ9HA64 309 aa13.22□□□□□ -0.29
SHANK2-204ENST00000409530 PPP1R3CQ9UQK1 317 aa13.22□□□□□ -0.29
SHANK2-204ENST00000409530 KCNK7Q9Y2U2 307 aa13.22□□□□□ -0.29
SHANK2-204ENST00000409530 RAI1Q7Z5J4 1906 aaPredicted RBP13.21□□□□□ -0.29
SHANK2-204ENST00000409530 B9A039 149 aa13.21□□□□□ -0.29
SHANK2-204ENST00000409530 LY6HO94772 140 aa13.21□□□□□ -0.29
SHANK2-204ENST00000409530 CLDN1O95832 211 aa13.21□□□□□ -0.29
SHANK2-204ENST00000409530 SOD3P08294 240 aa13.21□□□□□ -0.29
SHANK2-204ENST00000409530 PMELP40967 661 aa13.21□□□□□ -0.29
SHANK2-204ENST00000409530 GNG2P59768 71 aa13.21□□□□□ -0.29
SHANK2-204ENST00000409530 ZNF260Q3ZCT1 412 aa13.21□□□□□ -0.29
SHANK2-204ENST00000409530 CDH24Q86UP0 819 aa13.21□□□□□ -0.29
SHANK2-204ENST00000409530 TMEM200AQ86VY9 491 aa13.21□□□□□ -0.29
SHANK2-204ENST00000409530 RDH5Q92781 318 aa13.21□□□□□ -0.29
SHANK2-204ENST00000409530 TRIM63Q969Q1 353 aa13.21□□□□□ -0.29
SHANK2-204ENST00000409530 NEDD4LQ96PU5 975 aa13.21□□□□□ -0.29
SHANK2-204ENST00000409530 NRIP2Q9BQI9 281 aa13.21□□□□□ -0.29
SHANK2-204ENST00000409530 TM2D1Q9BX74 207 aa13.21□□□□□ -0.29
SHANK2-204ENST00000409530 GCM1Q9NP62 436 aa13.21□□□□□ -0.29
SHANK2-204ENST00000409530 PCDHB16Q9NRJ7 776 aa13.21□□□□□ -0.29
SHANK2-204ENST00000409530 IL19Q9UHD0 177 aa13.21□□□□□ -0.29
SHANK2-204ENST00000409530 COL8A1P27658 744 aa13.21□□□□□ -0.3
SHANK2-204ENST00000409530 DAZAP2Q15038 168 aaPredicted RBP13.21□□□□□ -0.3
SHANK2-204ENST00000409530 GVQW1Q8N7I0 195 aa13.21□□□□□ -0.3
SHANK2-204ENST00000409530 CHPT1Q8WUD6 406 aa13.21□□□□□ -0.3
SHANK2-204ENST00000409530 SULT4A1Q9BR01 284 aa13.21□□□□□ -0.3
SHANK2-204ENST00000409530 ZNF701Q9NV72 531 aaPredicted RBP13.21□□□□□ -0.3
SHANK2-204ENST00000409530 DNAJB11Q9UBS4 358 aa13.21□□□□□ -0.3
SHANK2-204ENST00000409530 TACC2O95359 2948 aa13.21□□□□□ -0.3
SHANK2-204ENST00000409530 AKAP6Q13023 2319 aa13.2□□□□□ -0.3
SHANK2-204ENST00000409530 A0A1B0GWJ7 208 aa13.2□□□□□ -0.3
SHANK2-204ENST00000409530 GABARAPH6UMI1 98 aa13.2□□□□□ -0.3
SHANK2-204ENST00000409530 PTBP3O95758 552 aaKnown RBP13.2□□□□□ -0.3
SHANK2-204ENST00000409530 CHRM2P08172 466 aa13.2□□□□□ -0.3
SHANK2-204ENST00000409530 PTBP1P26599 531 aaKnown RBP eCLIP13.2□□□□□ -0.37e-8■■■■□ 24.5
SHANK2-204ENST00000409530 PCGF3Q3KNV8 242 aa13.2□□□□□ -0.3
SHANK2-204ENST00000409530 POC1AQ8NBT0 407 aa13.2□□□□□ -0.3
SHANK2-204ENST00000409530 DEFB108BQ8NET1 73 aa13.2□□□□□ -0.3
SHANK2-204ENST00000409530 CCL17Q92583 94 aa13.2□□□□□ -0.3
SHANK2-204ENST00000409530 ZNF230Q9UIE0 474 aaPredicted RBP13.2□□□□□ -0.3
SHANK2-204ENST00000409530 TBC1D24Q9ULP9 559 aa13.2□□□□□ -0.3
SHANK2-204ENST00000409530 LYNX1G3V0Z9 82 aa13.19□□□□□ -0.3
SHANK2-204ENST00000409530 MFNGO00587 321 aa13.19□□□□□ -0.3
SHANK2-204ENST00000409530 ORC5O43913 435 aa13.19□□□□□ -0.3
SHANK2-204ENST00000409530 SCGNO76038 276 aa13.19□□□□□ -0.3
SHANK2-204ENST00000409530 LYNX1P0DP58 116 aa13.19□□□□□ -0.3
SHANK2-204ENST00000409530 CDKN1AP38936 164 aa13.19□□□□□ -0.3
SHANK2-204ENST00000409530 EFNB3Q15768 340 aa13.19□□□□□ -0.3
SHANK2-204ENST00000409530 TOMM5Q8N4H5 51 aa13.19□□□□□ -0.3
SHANK2-204ENST00000409530 FAM89BQ8N5H3 189 aa13.19□□□□□ -0.3
SHANK2-204ENST00000409530 CHST6Q9GZX3 395 aa13.19□□□□□ -0.3
SHANK2-204ENST00000409530 TLNRD1Q9H1K6 362 aa13.19□□□□□ -0.3
SHANK2-204ENST00000409530 A0A0A6YYH2 397 aa13.19□□□□□ -0.3
SHANK2-204ENST00000409530 A6NJ64 397 aa13.19□□□□□ -0.3
SHANK2-204ENST00000409530 J3QKU1 62 aa13.19□□□□□ -0.3
SHANK2-204ENST00000409530 HPXP02790 462 aa13.19□□□□□ -0.3
SHANK2-204ENST00000409530 MT-ND4P03905 459 aa13.19□□□□□ -0.3
SHANK2-204ENST00000409530 CHATP28329 748 aa13.19□□□□□ -0.3
SHANK2-204ENST00000409530 RGS21Q2M5E4 152 aa13.19□□□□□ -0.3
SHANK2-204ENST00000409530 ELP2Q6IA86 826 aa13.19□□□□□ -0.3
SHANK2-204ENST00000409530 OR52W1Q6IF63 320 aa13.19□□□□□ -0.3
SHANK2-204ENST00000409530 GCSAMQ8N6F7 178 aa13.19□□□□□ -0.3
SHANK2-204ENST00000409530 OR4S1Q8NGB4 309 aa13.19□□□□□ -0.3
SHANK2-204ENST00000409530 SETD6Q8TBK2 473 aa13.19□□□□□ -0.3
SHANK2-204ENST00000409530 CACNG6Q9BXT2 260 aa13.19□□□□□ -0.3
SHANK2-204ENST00000409530 MS4A5Q9H3V2 200 aa13.19□□□□□ -0.3
SHANK2-204ENST00000409530 IFT46Q9NQC8 304 aa13.19□□□□□ -0.3
SHANK2-204ENST00000409530 AK3Q9UIJ7 227 aa13.19□□□□□ -0.3
SHANK2-204ENST00000409530 MEX3AA1L020 520 aaKnown RBP13.18□□□□□ -0.3
SHANK2-204ENST00000409530 FOXI3A8MTJ6 420 aaPredicted RBP13.18□□□□□ -0.3
SHANK2-204ENST00000409530 PDCD6O75340 191 aa13.18□□□□□ -0.3
SHANK2-204ENST00000409530 CSN2P05814 226 aa13.18□□□□□ -0.3
SHANK2-204ENST00000409530 IRF2P14316 349 aa13.18□□□□□ -0.3
SHANK2-204ENST00000409530 TNFRSF1AP19438 455 aa13.18□□□□□ -0.3
SHANK2-204ENST00000409530 ERVK11-1P61568 191 aa13.18□□□□□ -0.3
SHANK2-204ENST00000409530 MRPS15P82914 257 aaKnown RBP13.18□□□□□ -0.3
SHANK2-204ENST00000409530 FAM189A2Q15884 450 aa13.18□□□□□ -0.3
SHANK2-204ENST00000409530 SWI5Q1ZZU3 235 aa13.18□□□□□ -0.3
SHANK2-204ENST00000409530 ACP7Q6ZNF0 438 aa13.18□□□□□ -0.3
SHANK2-204ENST00000409530 GLCCI1Q86VQ1 547 aa13.18□□□□□ -0.3
SHANK2-204ENST00000409530 Q8IYB0 196 aa13.18□□□□□ -0.3
SHANK2-204ENST00000409530 CENPSQ8N2Z9 138 aa13.18□□□□□ -0.3
SHANK2-204ENST00000409530 MRPS24Q96EL2 167 aaKnown RBP13.18□□□□□ -0.3
SHANK2-204ENST00000409530 EGLN1Q9GZT9 426 aa13.18□□□□□ -0.3
SHANK2-204ENST00000409530 PPA2Q9H2U2 334 aa13.18□□□□□ -0.3
SHANK2-204ENST00000409530 FUOMA2VDF0 154 aa13.18□□□□□ -0.3
SHANK2-204ENST00000409530 SSX5O60225 188 aa13.18□□□□□ -0.3
SHANK2-204ENST00000409530 OR2H2O95918 312 aa13.18□□□□□ -0.3
SHANK2-204ENST00000409530 LPLP06858 475 aa13.18□□□□□ -0.3
SHANK2-204ENST00000409530 HLA-DMAP28067 261 aa13.18□□□□□ -0.3
SHANK2-204ENST00000409530 GABRA2P47869 451 aa13.18□□□□□ -0.3
SHANK2-204ENST00000409530 ATXN7L3Q14CW9 347 aaPredicted RBP13.18□□□□□ -0.3
SHANK2-204ENST00000409530 SMIM21Q3B7S5 101 aa13.18□□□□□ -0.3
SHANK2-204ENST00000409530 HACD4Q5VWC8 232 aa13.18□□□□□ -0.3
SHANK2-204ENST00000409530 FIP1L1Q6UN15 594 aaKnown RBP13.18□□□□□ -0.3
SHANK2-204ENST00000409530 ST6GALNAC5Q9BVH7 336 aa13.18□□□□□ -0.3
SHANK2-204ENST00000409530 C11orf54Q9H0W9 315 aaPredicted RBP13.18□□□□□ -0.3
SHANK2-204ENST00000409530 CLEC4MQ9H2X3 399 aaPredicted RBP13.18□□□□□ -0.3
SHANK2-204ENST00000409530 CHMP1AQ9HD42 196 aaPredicted RBP13.18□□□□□ -0.3
SHANK2-204ENST00000409530 MCUBQ9NWR8 336 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms