RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 SNX22Q96L94 193 aa15.65■□□□□ 0.1
SMARCB1-204ENST00000407422 SPACA5Q96QH8 159 aa15.65■□□□□ 0.1
SMARCB1-204ENST00000407422 ALG8Q9BVK2 526 aa15.65■□□□□ 0.1
SMARCB1-204ENST00000407422 CHST6Q9GZX3 395 aa15.65■□□□□ 0.1
SMARCB1-204ENST00000407422 HHLA2Q9UM44 414 aa15.65■□□□□ 0.1
SMARCB1-204ENST00000407422 TRBV2A0A0J9YWF9 115 aa15.64■□□□□ 0.09
SMARCB1-204ENST00000407422 VGLL3A8MV65 326 aa15.64■□□□□ 0.09
SMARCB1-204ENST00000407422 PSPNO60542 156 aa15.64■□□□□ 0.09
SMARCB1-204ENST00000407422 ZNF728P0DKX0 622 aa15.64■□□□□ 0.09
SMARCB1-204ENST00000407422 PRKACBP22694 351 aa15.64■□□□□ 0.09
SMARCB1-204ENST00000407422 LGALS4P56470 323 aa15.64■□□□□ 0.09
SMARCB1-204ENST00000407422 ACTA2P62736 377 aa15.64■□□□□ 0.09
SMARCB1-204ENST00000407422 ACTG2P63267 376 aa15.64■□□□□ 0.09
SMARCB1-204ENST00000407422 ALKBH1Q13686 389 aaKnown RBP15.64■□□□□ 0.09
SMARCB1-204ENST00000407422 GALEQ14376 348 aa15.64■□□□□ 0.09
SMARCB1-204ENST00000407422 CRIP3Q6Q6R5 217 aa15.64■□□□□ 0.09
SMARCB1-204ENST00000407422 Q8IYB0 196 aa15.64■□□□□ 0.09
SMARCB1-204ENST00000407422 OR13C3Q8NGS6 347 aa15.64■□□□□ 0.09
SMARCB1-204ENST00000407422 PIFOQ8TCI5 191 aa15.64■□□□□ 0.09
SMARCB1-204ENST00000407422 OPALINQ96PE5 141 aa15.64■□□□□ 0.09
SMARCB1-204ENST00000407422 ZNF649Q9BS31 505 aa15.64■□□□□ 0.09
SMARCB1-204ENST00000407422 TCF7L1Q9HCS4 588 aa15.64■□□□□ 0.09
SMARCB1-204ENST00000407422 SIGLEC9Q9Y336 463 aa15.64■□□□□ 0.09
SMARCB1-204ENST00000407422 IGKV1-12A0A0C4DH73 117 aa15.63■□□□□ 0.09
SMARCB1-204ENST00000407422 MEGF11A6BM72 1044 aa15.63■□□□□ 0.09
SMARCB1-204ENST00000407422 FAM90A8PA6NJQ4 464 aa15.63■□□□□ 0.09
SMARCB1-204ENST00000407422 CYB5AP00167 134 aa15.63■□□□□ 0.09
SMARCB1-204ENST00000407422 IGKV1D-12P01611 117 aa15.63■□□□□ 0.09
SMARCB1-204ENST00000407422 PRKACAP17612 351 aa15.63■□□□□ 0.09
SMARCB1-204ENST00000407422 GABRR1P24046 479 aa15.63■□□□□ 0.09
SMARCB1-204ENST00000407422 PDZK1IP1Q13113 114 aa15.63■□□□□ 0.09
SMARCB1-204ENST00000407422 LDLRAD2Q5SZI1 272 aa15.63■□□□□ 0.09
SMARCB1-204ENST00000407422 ZBTB49Q6ZSB9 765 aa15.63■□□□□ 0.09
SMARCB1-204ENST00000407422 LHFPL2Q6ZUX7 228 aa15.63■□□□□ 0.09
SMARCB1-204ENST00000407422 PQLC1Q8N2U9 271 aa15.63■□□□□ 0.09
SMARCB1-204ENST00000407422 ZNF676Q8N7Q3 588 aa15.63■□□□□ 0.09
SMARCB1-204ENST00000407422 OR13C9Q8NGT0 318 aa15.63■□□□□ 0.09
SMARCB1-204ENST00000407422 SPSB1Q96BD6 273 aa15.63■□□□□ 0.09
SMARCB1-204ENST00000407422 LOC100130705A0A1B0GUX0 176 aa15.62■□□□□ 0.09
SMARCB1-204ENST00000407422 E9PI62 339 aa15.62■□□□□ 0.09
SMARCB1-204ENST00000407422 IGHV1-8P0DP01 117 aa15.62■□□□□ 0.09
SMARCB1-204ENST00000407422 ZNF146Q15072 292 aa15.62■□□□□ 0.09
SMARCB1-204ENST00000407422 GRK1Q15835 563 aa15.62■□□□□ 0.09
SMARCB1-204ENST00000407422 AANATQ16613 207 aa15.62■□□□□ 0.09
SMARCB1-204ENST00000407422 PLA1AQ53H76 456 aa15.62■□□□□ 0.09
SMARCB1-204ENST00000407422 C10orf67Q8IYJ2 551 aa15.62■□□□□ 0.09
SMARCB1-204ENST00000407422 OR4S1Q8NGB4 309 aa15.62■□□□□ 0.09
SMARCB1-204ENST00000407422 OR5D18Q8NGL1 313 aa15.62■□□□□ 0.09
SMARCB1-204ENST00000407422 ZNF714Q96N38 554 aa15.62■□□□□ 0.09
SMARCB1-204ENST00000407422 SEBOXQ9HB31 216 aaPredicted RBP15.62■□□□□ 0.09
SMARCB1-204ENST00000407422 FAM118AQ9NWS6 357 aa15.62■□□□□ 0.09
SMARCB1-204ENST00000407422 ERVK13-1Q9NX77 482 aa15.62■□□□□ 0.09
SMARCB1-204ENST00000407422 ODF3BA8MYP8 253 aa15.61■□□□□ 0.09
SMARCB1-204ENST00000407422 M0QZ24 198 aa15.61■□□□□ 0.09
SMARCB1-204ENST00000407422 TIMM23O14925 209 aa15.61■□□□□ 0.09
SMARCB1-204ENST00000407422 CHST1O43916 411 aa15.61■□□□□ 0.09
SMARCB1-204ENST00000407422 ARG1P05089 322 aa15.61■□□□□ 0.09
SMARCB1-204ENST00000407422 OCM2P0CE71 109 aa15.61■□□□□ 0.09
SMARCB1-204ENST00000407422 OCMP0CE72 109 aaPredicted RBP15.61■□□□□ 0.09
SMARCB1-204ENST00000407422 GABRA5P31644 462 aa15.61■□□□□ 0.09
SMARCB1-204ENST00000407422 RAB13P51153 203 aa15.61■□□□□ 0.09
SMARCB1-204ENST00000407422 MEF2CQ06413 473 aaPredicted RBP15.61■□□□□ 0.09
SMARCB1-204ENST00000407422 APH1BQ8WW43 257 aa15.61■□□□□ 0.09
SMARCB1-204ENST00000407422 Q96MT0 163 aa15.61■□□□□ 0.09
SMARCB1-204ENST00000407422 HMG20AQ9NP66 347 aa15.61■□□□□ 0.09
SMARCB1-204ENST00000407422 FBLN5Q9UBX5 448 aa15.61■□□□□ 0.09
SMARCB1-204ENST00000407422 TGP01266 2768 aa15.61■□□□□ 0.09
SMARCB1-204ENST00000407422 hADV38S2A0JD32 116 aa15.61■□□□□ 0.09
SMARCB1-204ENST00000407422 MPZL2O60487 215 aa15.61■□□□□ 0.09
SMARCB1-204ENST00000407422 ZFPL1O95159 310 aa15.61■□□□□ 0.09
SMARCB1-204ENST00000407422 FADS2O95864 444 aaKnown RBP15.61■□□□□ 0.09
SMARCB1-204ENST00000407422 RBP4P02753 201 aa15.61■□□□□ 0.09
SMARCB1-204ENST00000407422 PEX2P28328 305 aa15.61■□□□□ 0.09
SMARCB1-204ENST00000407422 SYS1Q8N2H4 156 aa15.61■□□□□ 0.09
SMARCB1-204ENST00000407422 OR52I1Q8NGK6 324 aa15.61■□□□□ 0.09
SMARCB1-204ENST00000407422 OR13D1Q8NGV5 346 aa15.61■□□□□ 0.09
SMARCB1-204ENST00000407422 GSTK1Q9Y2Q3 226 aa15.61■□□□□ 0.09
SMARCB1-204ENST00000407422 TET2Q6N021 2002 aaPredicted RBP15.6■□□□□ 0.09
SMARCB1-204ENST00000407422 SIRPB1O00241 398 aa15.6■□□□□ 0.09
SMARCB1-204ENST00000407422 EBAG9O00559 213 aa15.6■□□□□ 0.09
SMARCB1-204ENST00000407422 MT-ND2P03891 347 aa15.6■□□□□ 0.09
SMARCB1-204ENST00000407422 OR3A1P47881 315 aa15.6■□□□□ 0.09
SMARCB1-204ENST00000407422 RAB40BQ12829 278 aa15.6■□□□□ 0.09
SMARCB1-204ENST00000407422 SSX2Q16385 188 aa15.6■□□□□ 0.09
SMARCB1-204ENST00000407422 SPIN3Q5JUX0 258 aa15.6■□□□□ 0.09
SMARCB1-204ENST00000407422 ZNF626Q68DY1 528 aa15.6■□□□□ 0.09
SMARCB1-204ENST00000407422 OR11H6Q8NGC7 330 aa15.6■□□□□ 0.09
SMARCB1-204ENST00000407422 MRPL48Q96GC5 212 aaKnown RBP15.6■□□□□ 0.09
SMARCB1-204ENST00000407422 PDCD1LG2Q9BQ51 273 aa15.6■□□□□ 0.09
SMARCB1-204ENST00000407422 ZCCHC4Q9H5U6 513 aa15.6■□□□□ 0.09
SMARCB1-204ENST00000407422 LINC00312Q9Y6C7 94 aa15.6■□□□□ 0.09
SMARCB1-204ENST00000407422 KDM4BO94953 1096 aa15.59■□□□□ 0.09
SMARCB1-204ENST00000407422 DEFA6Q01524 100 aa15.59■□□□□ 0.09
SMARCB1-204ENST00000407422 DYNC1I2Q13409 638 aaKnown RBP15.59■□□□□ 0.09
SMARCB1-204ENST00000407422 SMN1Q16637 294 aaKnown RBP15.59■□□□□ 0.09
SMARCB1-204ENST00000407422 HIST2H2BDQ6DRA6 164 aa15.59■□□□□ 0.09
SMARCB1-204ENST00000407422 TBL2Q9Y4P3 447 aaKnown RBP15.59■□□□□ 0.09
SMARCB1-204ENST00000407422 MGST3O14880 152 aa15.58■□□□□ 0.09
SMARCB1-204ENST00000407422 MMP23AO75900 390 aa15.58■□□□□ 0.09
SMARCB1-204ENST00000407422 BAG2O95816 211 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms