RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 LINC00596Q86U02 117 aa17.2■□□□□ 0.34
CHKB-201ENST00000406938 C19orf18Q8NEA5 215 aa17.2■□□□□ 0.34
CHKB-201ENST00000406938 NUDT16L1Q9BRJ7 211 aaKnown RBP17.2■□□□□ 0.34
CHKB-201ENST00000406938 LIME1Q9H400 295 aa17.2■□□□□ 0.34
CHKB-201ENST00000406938 DNAJB11Q9UBS4 358 aa17.2■□□□□ 0.34
CHKB-201ENST00000406938 DSCAMO60469 2012 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 FAM90A10PA6NDY2 464 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 FAM90A18PA6NE21 464 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 FAM90A16PA6NEW6 464 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 FAM90A20PA6NIJ5 464 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 FAM90A8PA6NJQ4 464 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 FAM90A7PA6NKC0 464 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 FAM90A22PA8MWA6 464 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 FAM90A12PA8MX19 464 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 FAM90A5PA8MXJ8 464 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 FAM90A23PA8MXZ1 464 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 LYNX1G3V0Z9 82 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 TMEM178BH3BS89 294 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 IFNL4K9M1U5 179 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 ZNF205O95201 554 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 FAM90A15PP0C7V4 464 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 FAM90A13PP0C7W8 464 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 FAM90A14PP0C7W9 464 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 FAM90A24PP0C7X0 464 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 LYNX1P0DP58 116 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 NR4A2P43354 598 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 ZNF146Q15072 292 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 MPV17LQ2QL34 196 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 HFEQ30201 348 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 PLAC9Q5JTB6 97 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 ZNF787Q6DD87 383 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 SFRP4Q6FHJ7 346 aaPredicted RBP17.19■□□□□ 0.34
CHKB-201ENST00000406938 C1orf87Q8N0U7 546 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 CHST4Q8NCG5 386 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 NRGNQ92686 78 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 YIPF5Q969M3 257 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 RAB3CQ96E17 227 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 CYYR1Q96J86 154 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 ZMAT3Q9HA38 289 aaKnown RBP17.19■□□□□ 0.34
CHKB-201ENST00000406938 NLKQ9UBE8 527 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 FBN2P35556 2912 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 TANC2Q9HCD6 1990 aa17.19■□□□□ 0.34
CHKB-201ENST00000406938 IGHV3OR15-7A0A075B7D8 119 aa17.18■□□□□ 0.34
CHKB-201ENST00000406938 KNG1P01042 644 aa17.18■□□□□ 0.34
CHKB-201ENST00000406938 COL8A2P25067 703 aa17.18■□□□□ 0.34
CHKB-201ENST00000406938 MNDAP41218 407 aa17.18■□□□□ 0.34
CHKB-201ENST00000406938 TMEM50BP56557 158 aa17.18■□□□□ 0.34
CHKB-201ENST00000406938 ZNF846Q147U1 533 aa17.18■□□□□ 0.34
CHKB-201ENST00000406938 NKAPLQ5M9Q1 402 aa17.18■□□□□ 0.34
CHKB-201ENST00000406938 FAM90A1Q86YD7 464 aa17.18■□□□□ 0.34
CHKB-201ENST00000406938 SNX29P2Q8IUI4 249 aa17.18■□□□□ 0.34
CHKB-201ENST00000406938 GCDHQ92947 438 aaPredicted RBP17.18■□□□□ 0.34
CHKB-201ENST00000406938 POM121Q96HA1 1249 aa17.18■□□□□ 0.34
CHKB-201ENST00000406938 ARHGAP5-AS1Q96IT6 56 aa17.18■□□□□ 0.34
CHKB-201ENST00000406938 ABHD1Q96SE0 405 aa17.18■□□□□ 0.34
CHKB-201ENST00000406938 OR14J1Q9UGF5 321 aa17.18■□□□□ 0.34
CHKB-201ENST00000406938 DYSFO75923 2080 aa17.18■□□□□ 0.34
CHKB-201ENST00000406938 NDUFS7O75251 213 aa17.18■□□□□ 0.34
CHKB-201ENST00000406938 HLA-DQB1P01920 261 aa17.18■□□□□ 0.34
CHKB-201ENST00000406938 PTHLHP12272 177 aa17.18■□□□□ 0.34
CHKB-201ENST00000406938 DAOP14920 347 aa17.18■□□□□ 0.34
CHKB-201ENST00000406938 HIST1H1DP16402 221 aaKnown RBP17.18■□□□□ 0.34
CHKB-201ENST00000406938 GNB3P16520 340 aa17.18■□□□□ 0.34
CHKB-201ENST00000406938 CEBPDP49716 269 aaPredicted RBP17.18■□□□□ 0.34
CHKB-201ENST00000406938 SCN1BQ07699 218 aa17.18■□□□□ 0.34
CHKB-201ENST00000406938 PYHIN1Q6K0P9 492 aa17.18■□□□□ 0.34
CHKB-201ENST00000406938 OR5T2Q8NGG2 359 aa17.18■□□□□ 0.34
CHKB-201ENST00000406938 RDH5Q92781 318 aa17.18■□□□□ 0.34
CHKB-201ENST00000406938 SRRQ9GZT4 340 aa17.18■□□□□ 0.34
CHKB-201ENST00000406938 OR2AT4A6NND4 320 aa17.17■□□□□ 0.34
CHKB-201ENST00000406938 J3QRK9 145 aa17.17■□□□□ 0.34
CHKB-201ENST00000406938 PDCD6O75340 191 aa17.17■□□□□ 0.34
CHKB-201ENST00000406938 RP2O75695 350 aa17.17■□□□□ 0.34
CHKB-201ENST00000406938 HAND1O96004 215 aa17.17■□□□□ 0.34
CHKB-201ENST00000406938 PTBP1P26599 531 aaKnown RBP eCLIP17.17■□□□□ 0.34
CHKB-201ENST00000406938 CHATP28329 748 aa17.17■□□□□ 0.34
CHKB-201ENST00000406938 MRPS11P82912 194 aaKnown RBP17.17■□□□□ 0.34
CHKB-201ENST00000406938 PYDC2Q56P42 97 aa17.17■□□□□ 0.34
CHKB-201ENST00000406938 ATAD3CQ5T2N8 411 aa17.17■□□□□ 0.34
CHKB-201ENST00000406938 Q6ZTK2 550 aa17.17■□□□□ 0.34
CHKB-201ENST00000406938 C6orf201Q7Z4U5 140 aa17.17■□□□□ 0.34
CHKB-201ENST00000406938 NEDD4LQ96PU5 975 aa17.17■□□□□ 0.34
CHKB-201ENST00000406938 DLL4Q9NR61 685 aa17.17■□□□□ 0.34
CHKB-201ENST00000406938 RCC2Q9P258 522 aaKnown RBP17.17■□□□□ 0.34
CHKB-201ENST00000406938 KCNK7Q9Y2U2 307 aa17.17■□□□□ 0.34
CHKB-201ENST00000406938 WIPI2Q9Y4P8 454 aa17.17■□□□□ 0.34
CHKB-201ENST00000406938 FASNP49327 2511 aaKnown RBP17.16■□□□□ 0.34
CHKB-201ENST00000406938 TMEM235A6NFC5 223 aa17.16■□□□□ 0.34
CHKB-201ENST00000406938 OOEPA6NGQ2 149 aa17.16■□□□□ 0.34
CHKB-201ENST00000406938 RFPL4AA6NLU0 287 aa17.16■□□□□ 0.34
CHKB-201ENST00000406938 RFPL4AL1F8VTS6 287 aa17.16■□□□□ 0.34
CHKB-201ENST00000406938 MFNGO00587 321 aa17.16■□□□□ 0.34
CHKB-201ENST00000406938 OR2H2O95918 312 aa17.16■□□□□ 0.34
CHKB-201ENST00000406938 F12P00748 615 aaPredicted RBP17.16■□□□□ 0.34
CHKB-201ENST00000406938 TFF1P04155 84 aa17.16■□□□□ 0.34
CHKB-201ENST00000406938 PSG2P11465 335 aa17.16■□□□□ 0.34
CHKB-201ENST00000406938 ZNF44P15621 663 aa17.16■□□□□ 0.34
CHKB-201ENST00000406938 EFNA4P52798 201 aa17.16■□□□□ 0.34
CHKB-201ENST00000406938 KRTAP10-9P60411 292 aa17.16■□□□□ 0.34
CHKB-201ENST00000406938 PITPNAQ00169 270 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms