RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 CACNG2Q9Y698 323 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 PTPN13Q12923 2485 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 UBR5O95071 2799 aaPredicted RBP3.14□□□□□ -1.91
RTN4-208ENST00000404909 FASNP49327 2511 aaKnown RBP3.14□□□□□ -1.91
RTN4-208ENST00000404909 DEFB108AA8MXU0 73 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 H7C417 338 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 M0R233 179 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 PTTG1O95997 202 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 IGHV1-46P01743 117 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 ZNF44P15621 663 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 AGAP20933 346 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 GLRA1P23415 457 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 TNFSF4P23510 183 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 MPZP25189 248 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 APOBEC3AP31941 199 aaPredicted RBP3.14□□□□□ -1.91
RTN4-208ENST00000404909 AP3S2P59780 193 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 FGF12P61328 243 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 OXA1LQ15070 435 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 OR52W1Q6IF63 320 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 MZT2BQ6NZ67 158 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 CCBE1Q6UXH8 406 aaPredicted RBP3.14□□□□□ -1.91
RTN4-208ENST00000404909 WDR82Q6UXN9 313 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 C11orf53Q8IXP5 236 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 SAXO1Q8IYX7 474 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 OR5T2Q8NGG2 359 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 SETD6Q8TBK2 473 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 GPX8Q8TED1 209 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 CHPT1Q8WUD6 406 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 RDH5Q92781 318 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 HDHD3Q9BSH5 251 aaPredicted RBP3.14□□□□□ -1.91
RTN4-208ENST00000404909 DECR2Q9NUI1 292 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 NLKQ9UBE8 527 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 MTFP1Q9UDX5 166 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 CHD3Q12873 2000 aaKnown RBP3.14□□□□□ -1.91
RTN4-208ENST00000404909 POLQO75417 2590 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 ABCA12Q86UK0 2595 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 ARFGEF3Q5TH69 2177 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 KIAA2026Q5HYC2 2103 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 SIRPB1O00241 398 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 MFNGO00587 321 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 TFF1P04155 84 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 CD3DP04234 171 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 GSTP1P09211 210 aaKnown RBP3.14□□□□□ -1.91
RTN4-208ENST00000404909 GSTT2BP0CG30 244 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 RNF224P0DH78 156 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 PGA5P0DJD9 388 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 FUT3P21217 361 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 RCVRNP35243 200 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 RFX2P48378 723 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 CEBPDP49716 269 aaPredicted RBP3.14□□□□□ -1.91
RTN4-208ENST00000404909 RAB25P57735 213 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 ACTBP60709 375 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 ACTG1P63261 375 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 ELP2Q6IA86 826 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 MUC15Q8N387 334 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 OR4D10Q8NGI6 311 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 LRRC29Q8WV35 223 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 MEGF10Q96KG7 1140 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 VRK1Q99986 396 aaPredicted RBP3.14□□□□□ -1.91
RTN4-208ENST00000404909 NRIP2Q9BQI9 281 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 SULT4A1Q9BR01 284 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 SCPEP1Q9HB40 452 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 MED13LQ71F56 2210 aa3.14□□□□□ -1.91
RTN4-208ENST00000404909 C17orf100A8MU93 164 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 SERPINE3A8MV23 424 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 ZNF736B4DX44 427 aaPredicted RBP3.13□□□□□ -1.91
RTN4-208ENST00000404909 M0QYG6 137 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 DEGS1O15121 323 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 SSX5O60225 188 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 PDCD6O75340 191 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 TPPPO94811 219 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 ECDO95905 644 aaPredicted RBP3.13□□□□□ -1.91
RTN4-208ENST00000404909 CSF1P09603 554 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 GIFP27352 417 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 CHATP28329 748 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 CCR6P51684 374 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 KLF9Q13886 244 aaPredicted RBP3.13□□□□□ -1.91
RTN4-208ENST00000404909 ZNF672Q499Z4 452 aaPredicted RBP3.13□□□□□ -1.91
RTN4-208ENST00000404909 FAM201AQ5SY85 155 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 Q8IYB0 196 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 LILRB1Q8NHL6 650 aaPredicted RBP3.13□□□□□ -1.91
RTN4-208ENST00000404909 CMSS1Q9BQ75 279 aaKnown RBP3.13□□□□□ -1.91
RTN4-208ENST00000404909 FN3KRPQ9HA64 309 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 SAP30LQ9HAJ7 183 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 CHMP1AQ9HD42 196 aaPredicted RBP3.13□□□□□ -1.91
RTN4-208ENST00000404909 HRASLSQ9HDD0 168 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 ASH1LQ9NR48 2969 aaKnown RBP3.13□□□□□ -1.91
RTN4-208ENST00000404909 DNAJB11Q9UBS4 358 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 AK3Q9UIJ7 227 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 ZDHHC8Q9ULC8 765 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 PPP1R3CQ9UQK1 317 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 RBMX2Q9Y388 322 aaKnown RBP3.13□□□□□ -1.91
RTN4-208ENST00000404909 ARID1AO14497 2285 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 HCFC1P51610 2035 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 IGHV3OR15-7A0A075B7D8 119 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 ANKRD20A5PA0PJZ0 165 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 RFPL4AA6NLU0 287 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 FOXI3A8MTJ6 420 aaPredicted RBP3.13□□□□□ -1.91
RTN4-208ENST00000404909 RFPL4AL1F8VTS6 287 aa3.13□□□□□ -1.91
RTN4-208ENST00000404909 SULT1C2O00338 296 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms