RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 BANF2Q9H503 90 aa10.31□□□□□ -0.76
LINC00339-201ENST00000404210 CELSR2Q9HCU4 2923 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 IGHV3OR15-7A0A075B7D8 119 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 FAM90A10PA6NDY2 464 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 FAM90A18PA6NE21 464 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 FAM90A16PA6NEW6 464 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 FAM90A20PA6NIJ5 464 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 FAM90A8PA6NJQ4 464 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 FAM90A7PA6NKC0 464 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 FAM90A22PA8MWA6 464 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 FAM90A12PA8MX19 464 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 FAM90A5PA8MXJ8 464 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 FAM90A23PA8MXZ1 464 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 H3BUI4 141 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 CHRM2P08172 466 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 FAM90A15PP0C7V4 464 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 FAM90A13PP0C7W8 464 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 FAM90A14PP0C7W9 464 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 FAM90A24PP0C7X0 464 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 SLC25A16P16260 332 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 LMO1P25800 156 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 PRDX2P32119 198 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 RBM11P57052 281 aaKnown RBP10.3□□□□□ -0.76
LINC00339-201ENST00000404210 RPS27AP62979 156 aaKnown RBP10.3□□□□□ -0.76
LINC00339-201ENST00000404210 MPV17LQ2QL34 196 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 AVPI1Q5T686 147 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 STUMQ69YW2 141 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 Q6P435 159 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 DCDC5Q6ZRR9 648 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 FAM89BQ8N5H3 189 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 OR5T2Q8NGG2 359 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 OR5H6Q8NGV6 325 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 FAM46BQ96A09 425 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 Q96M66 194 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 TMEM246Q9BRR3 403 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 TMEM59Q9BXS4 323 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 SELENOIQ9C0D9 397 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 SLIRPQ9GZT3 109 aaKnown RBP10.3□□□□□ -0.76
LINC00339-201ENST00000404210 NXF2Q9GZY0 626 aaKnown RBP10.3□□□□□ -0.76
LINC00339-201ENST00000404210 LPAR5Q9H1C0 372 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 KCNK15Q9H427 330 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 KAAG1Q9UBP8 84 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 A3GALT2U3KPV4 340 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 FBN2P35556 2912 aa10.3□□□□□ -0.76
LINC00339-201ENST00000404210 IGKV1D-17A0A075B6S4 117 aa10.29□□□□□ -0.76
LINC00339-201ENST00000404210 METTL21EPA6NDL7 271 aa10.29□□□□□ -0.76
LINC00339-201ENST00000404210 DEGS1O15121 323 aa10.29□□□□□ -0.76
LINC00339-201ENST00000404210 GYPAP02724 150 aa10.29□□□□□ -0.76
LINC00339-201ENST00000404210 AMY2BP19961 511 aa10.29□□□□□ -0.76
LINC00339-201ENST00000404210 NR4A2P43354 598 aa10.29□□□□□ -0.76
LINC00339-201ENST00000404210 ART1P52961 327 aa10.29□□□□□ -0.76
LINC00339-201ENST00000404210 PIGYQ3MUY2 71 aa10.29□□□□□ -0.76
LINC00339-201ENST00000404210 Q5PR19 223 aa10.29□□□□□ -0.76
LINC00339-201ENST00000404210 ZNF788Q6ZQV5 615 aa10.29□□□□□ -0.76
LINC00339-201ENST00000404210 SLC36A1Q7Z2H8 476 aa10.29□□□□□ -0.76
LINC00339-201ENST00000404210 SPICQ8N5J4 248 aa10.29□□□□□ -0.76
LINC00339-201ENST00000404210 LGALS14Q8TCE9 139 aa10.29□□□□□ -0.76
LINC00339-201ENST00000404210 SDSLQ96GA7 329 aa10.29□□□□□ -0.76
LINC00339-201ENST00000404210 MED30Q96HR3 178 aa10.29□□□□□ -0.76
LINC00339-201ENST00000404210 DCUN1D5Q9BTE7 237 aa10.29□□□□□ -0.76
LINC00339-201ENST00000404210 BPESC1Q9GZL8 116 aa10.29□□□□□ -0.76
LINC00339-201ENST00000404210 ABCG5Q9H222 651 aa10.29□□□□□ -0.76
LINC00339-201ENST00000404210 MMP27Q9H306 513 aa10.29□□□□□ -0.76
LINC00339-201ENST00000404210 ZNF665Q9H7R5 613 aa10.29□□□□□ -0.76
LINC00339-201ENST00000404210 IFT22Q9H7X7 185 aa10.29□□□□□ -0.76
LINC00339-201ENST00000404210 IL36RNQ9UBH0 155 aa10.29□□□□□ -0.76
LINC00339-201ENST00000404210 COMMD3Q9UBI1 195 aa10.29□□□□□ -0.76
LINC00339-201ENST00000404210 MIOXQ9UGB7 285 aa10.29□□□□□ -0.76
LINC00339-201ENST00000404210 OR14J1Q9UGF5 321 aa10.29□□□□□ -0.76
LINC00339-201ENST00000404210 ZNF222Q9UK12 451 aa10.29□□□□□ -0.76
LINC00339-201ENST00000404210 IGHV4-30-2A0A087WSY4 118 aa10.28□□□□□ -0.76
LINC00339-201ENST00000404210 ISPDA4D126 451 aa10.28□□□□□ -0.76
LINC00339-201ENST00000404210 GEMIN2O14893 280 aaKnown RBP10.28□□□□□ -0.76
LINC00339-201ENST00000404210 OR2H2O95918 312 aa10.28□□□□□ -0.76
LINC00339-201ENST00000404210 HAND1O96004 215 aa10.28□□□□□ -0.76
LINC00339-201ENST00000404210 DUSP1P28562 367 aa10.28□□□□□ -0.76
LINC00339-201ENST00000404210 GABRA2P47869 451 aa10.28□□□□□ -0.76
LINC00339-201ENST00000404210 PITPNBP48739 271 aa10.28□□□□□ -0.76
LINC00339-201ENST00000404210 EFNB2P52799 333 aa10.28□□□□□ -0.76
LINC00339-201ENST00000404210 SNU13P55769 128 aaKnown RBP10.28□□□□□ -0.76
LINC00339-201ENST00000404210 PLA2G7Q13093 441 aa10.28□□□□□ -0.76
LINC00339-201ENST00000404210 PDCD1Q15116 288 aa10.28□□□□□ -0.76
LINC00339-201ENST00000404210 TAF9Q16594 264 aa10.28□□□□□ -0.76
LINC00339-201ENST00000404210 CNPY1Q3B7I2 92 aa10.28□□□□□ -0.76
LINC00339-201ENST00000404210 KRTAP1-3Q8IUG1 177 aa10.28□□□□□ -0.76
LINC00339-201ENST00000404210 ZNF561Q8N587 486 aa10.28□□□□□ -0.76
LINC00339-201ENST00000404210 CD177Q8N6Q3 437 aa10.28□□□□□ -0.76
LINC00339-201ENST00000404210 CHST4Q8NCG5 386 aa10.28□□□□□ -0.76
LINC00339-201ENST00000404210 MCFD2Q8NI22 146 aa10.28□□□□□ -0.76
LINC00339-201ENST00000404210 RAB40AQ8WXH6 277 aa10.28□□□□□ -0.76
LINC00339-201ENST00000404210 SNX22Q96L94 193 aa10.28□□□□□ -0.76
LINC00339-201ENST00000404210 CCL13Q99616 98 aa10.28□□□□□ -0.76
LINC00339-201ENST00000404210 PATZ1Q9HBE1 687 aaKnown RBP10.28□□□□□ -0.76
LINC00339-201ENST00000404210 PCDHB10Q9UN67 800 aa10.28□□□□□ -0.76
LINC00339-201ENST00000404210 MAB21L2Q9Y586 359 aa10.28□□□□□ -0.76
LINC00339-201ENST00000404210 A0A0A6YYH2 397 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 NKX6-3A6NJ46 265 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 A6NJ64 397 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 CEACAM18A8MTB9 384 aa10.27□□□□□ -0.77
LINC00339-201ENST00000404210 SIGLEC5O15389 551 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms