RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 FRZBQ92765 325 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 TCTN2Q96GX1 697 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 PLEKHA2Q9HB19 425 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 ZFP92A6NM28 416 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 ALG1L2C9J202 215 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 TSTD3H0UI37 97 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 DDAH2O95865 285 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 THEGLP0DJG4 465 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 P2RY1P47900 373 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 EFNA3P52797 238 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 FOXF1Q12946 379 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 GNMTQ14749 295 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 STX12Q86Y82 276 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 ZNF721Q8TF20 911 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 RLN3Q8WXF3 142 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 GTF3AQ92664 365 aaKnown RBP8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 HAS2Q92819 552 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 BADQ92934 168 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 OPA3Q9H6K4 179 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 GPR173Q9NS66 373 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 PPP4R1LQ9P1A2 415 aa8.63□□□□□ -1.03
PTCHD4-202ENST00000398738 ST8SIA3O43173 380 aa8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 SSSCA1O60232 199 aa8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 SOX15O60248 233 aa8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 CYTIPO60759 359 aa8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 NPIPB7O75200 414 aa8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 DBHP09172 617 aa8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 HIST1H1BP16401 226 aaKnown RBP8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 LSM6P62312 80 aaKnown RBP8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 RPL23AP62750 156 aaKnown RBP8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 RAB1AP62820 205 aa8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 PPA1Q15181 289 aa8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 ZNF385CQ66K41 422 aaPredicted RBP8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 DTX1Q86Y01 620 aa8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 TGIF2LXQ8IUE1 241 aa8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 NIPSNAP3BQ9BS92 247 aa8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 SERINC1Q9NRX5 453 aa8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 GNG13Q9P2W3 67 aa8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 WASF3Q9UPY6 502 aa8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 WSB1Q9Y6I7 421 aa8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 NUP210LQ5VU65 1888 aa8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 OR5H15A6NDH6 313 aa8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 OR5H1A6NKK0 313 aa8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 ZNHIT1O43257 154 aa8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 GPR137BO60478 399 aa8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 MYF5P13349 255 aa8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 SSTP61278 116 aa8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 IGLV3-21P80748 117 aaPredicted RBP8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 FIP1L1Q6UN15 594 aaKnown RBP8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 PACRGQ96M98 296 aaPredicted RBP8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 WNT10AQ9GZT5 417 aa8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 ZNF160Q9HCG1 818 aa8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 CRIM1Q9NZV1 1036 aa8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 KLHL13Q9P2N7 655 aa8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 U3KQE9 123 aa8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 VPS13AQ96RL7 3174 aa8.62□□□□□ -1.03
PTCHD4-202ENST00000398738 TCRBV21S2A2A0A5A6 115 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 SMCO3A2RU48 225 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 HLA-HP01893 362 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 SPINK2P20155 84 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 MTCP1P56278 107 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 HSD11B2P80365 405 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 ARHGEF39Q8N4T4 335 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 OR2AE1Q8NHA4 323 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 RNASE11Q8TAA1 199 aaKnown RBP8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 WFIKKN1Q96NZ8 548 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 CHST11Q9NPF2 352 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 LANCL2Q9NS86 450 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 CUTCQ9NTM9 273 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 KLRF1Q9NZS2 232 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 PISDQ9UG56 409 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 PIGLQ9Y2B2 252 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 BRWD1Q9NSI6 2320 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 CCDC187A0A096LP49 1063 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 KIR2DS5A0A0G2JLQ3 304 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 A0A0G2JNG1 304 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 SEC14L6B5MCN3 397 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 FTCDNL1E5RQL4 147 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 H3BMH7 237 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 KIR2DS3K7RE56 304 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 EWSR1Q01844 656 aaKnown RBP eCLIP8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 KIR2DS5Q14953 304 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 HIST2H3PS2Q5TEC6 136 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 DEGS2Q6QHC5 323 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 LYPD6BQ8NI32 183 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 HPSE2Q8WWQ2 592 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 WNT16Q9UBV4 365 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 A0A1W2PR80 420 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 NKX2-6A6NCS4 301 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 CRYM-AS1A6NIL9 109 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 CA3P07451 260 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 HOXC4P09017 264 aaPredicted RBP8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 FOLR1P15328 257 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 PNLIPP16233 465 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 PLA2G5P39877 138 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 FGF8P55075 233 aaPredicted RBP8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 MPV17LQ2QL34 196 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 WDR25Q64LD2 544 aaPredicted RBP8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 SLC22A25Q6T423 547 aa8.61□□□□□ -1.03
PTCHD4-202ENST00000398738 LCN15Q6UWW0 184 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms