RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 FAM117AQ9C073 453 aa15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 OR2H1Q9GZK4 316 aa15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 LRFN1Q9P244 771 aa15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 TIMM10BQ9Y5J6 103 aa15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 COL27A1Q8IZC6 1860 aaPredicted RBP15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 HEXAP06865 529 aa15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 PTGER4P35408 488 aa15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 RBP2P50120 134 aa15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 FAM76BQ5HYJ3 339 aa15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 PHYHIPLQ96FC7 376 aa15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 GPR35Q9HC97 309 aa15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 AK3Q9UIJ7 227 aa15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 CARHSP1Q9Y2V2 147 aaKnown RBP15.92■□□□□ 0.14
CHRFAM7A-202ENST00000397827 FRYQ5TBA9 3013 aa15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 TRBV6-7A0A0A0MS04 114 aa15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 NRASP01111 189 aa15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 FOXO1Q12778 655 aa15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 RAB32Q13637 225 aa15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 PDCD1Q15116 288 aa15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 CNN3Q15417 329 aaKnown RBP15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 SSX2Q16385 188 aa15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 PIGYQ3MUY2 71 aa15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 C9orf135Q5VTT2 229 aa15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 BATF2Q8N1L9 274 aa15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 CCDC54Q8NEL0 328 aa15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 TMEM231Q9H6L2 316 aa15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 METTL1Q9UBP6 276 aaKnown RBP15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 IGKV1-12A0A0C4DH73 117 aa15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 TEX13DA0A0J9YY54 714 aaPredicted RBP15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 FAM221AA4D161 298 aa15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 IGKV1D-12P01611 117 aa15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 CELA3AP09093 270 aa15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 JMJD7P0C870 316 aa15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 GFRA1P56159 465 aa15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 RBM39Q14498 530 aaKnown RBP15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 ARL6IP1Q15041 203 aa15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 FOXRED2Q8IWF2 684 aa15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 TCTEX1D2Q8WW35 142 aa15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 HES7Q9BYE0 225 aa15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 ARRDC1-AS1Q9H2J1 176 aa15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 LIME1Q9H400 295 aa15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 C14orf166Q9Y224 244 aaKnown RBP15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 DNAJC13O75165 2243 aa15.91■□□□□ 0.14
CHRFAM7A-202ENST00000397827 ZNF407Q9C0G0 2248 aa15.9■□□□□ 0.14
CHRFAM7A-202ENST00000397827 GEMIN2O14893 280 aaKnown RBP15.9■□□□□ 0.14
CHRFAM7A-202ENST00000397827 FOLR2P14207 255 aa15.9■□□□□ 0.14
CHRFAM7A-202ENST00000397827 FAM3AP98173 230 aa15.9■□□□□ 0.14
CHRFAM7A-202ENST00000397827 AKIRIN2Q53H80 203 aa15.9■□□□□ 0.14
CHRFAM7A-202ENST00000397827 C14orf144Q96I85 54 aa15.9■□□□□ 0.14
CHRFAM7A-202ENST00000397827 SULT4A1Q9BR01 284 aa15.9■□□□□ 0.14
CHRFAM7A-202ENST00000397827 GGACTQ9BVM4 153 aa15.9■□□□□ 0.14
CHRFAM7A-202ENST00000397827 TREM1Q9NP99 234 aa15.9■□□□□ 0.14
CHRFAM7A-202ENST00000397827 ANXA10Q9UJ72 324 aa15.9■□□□□ 0.14
CHRFAM7A-202ENST00000397827 A0A1B0GWJ7 208 aa15.9■□□□□ 0.14
CHRFAM7A-202ENST00000397827 ZNF587BE7ETH6 402 aa15.9■□□□□ 0.14
CHRFAM7A-202ENST00000397827 ACTL6AO96019 429 aa15.9■□□□□ 0.14
CHRFAM7A-202ENST00000397827 SFTPBP07988 381 aa15.9■□□□□ 0.14
CHRFAM7A-202ENST00000397827 NQO2P16083 231 aa15.9■□□□□ 0.14
CHRFAM7A-202ENST00000397827 TSPO2Q5TGU0 170 aa15.9■□□□□ 0.14
CHRFAM7A-202ENST00000397827 MEGF10Q96KG7 1140 aa15.9■□□□□ 0.14
CHRFAM7A-202ENST00000397827 URB1O60287 2271 aaKnown RBP15.89■□□□□ 0.13
CHRFAM7A-202ENST00000397827 C9orf172C9J069 976 aa15.89■□□□□ 0.13
CHRFAM7A-202ENST00000397827 CASP6P55212 293 aa15.89■□□□□ 0.13
CHRFAM7A-202ENST00000397827 S100A10P60903 97 aa15.89■□□□□ 0.13
CHRFAM7A-202ENST00000397827 TMEM200AQ86VY9 491 aa15.89■□□□□ 0.13
CHRFAM7A-202ENST00000397827 PIGCQ92535 297 aa15.89■□□□□ 0.13
CHRFAM7A-202ENST00000397827 CPNE4Q96A23 557 aaPredicted RBP15.89■□□□□ 0.13
CHRFAM7A-202ENST00000397827 SIGLEC12Q96PQ1 595 aa15.89■□□□□ 0.13
CHRFAM7A-202ENST00000397827 RSRP1Q9BUV0 290 aa15.89■□□□□ 0.13
CHRFAM7A-202ENST00000397827 CYTL1Q9NRR1 136 aa15.89■□□□□ 0.13
CHRFAM7A-202ENST00000397827 FOXJ2Q9P0K8 574 aa15.89■□□□□ 0.13
CHRFAM7A-202ENST00000397827 SLC31A2O15432 143 aa15.89■□□□□ 0.13
CHRFAM7A-202ENST00000397827 CYTIPO60759 359 aa15.89■□□□□ 0.13
CHRFAM7A-202ENST00000397827 KRTAP27-1Q3LI81 207 aa15.89■□□□□ 0.13
CHRFAM7A-202ENST00000397827 C10orf91Q5T1B1 145 aa15.89■□□□□ 0.13
CHRFAM7A-202ENST00000397827 RTL6Q6ICC9 239 aa15.89■□□□□ 0.13
CHRFAM7A-202ENST00000397827 PRSS54Q6PEW0 395 aa15.89■□□□□ 0.13
CHRFAM7A-202ENST00000397827 CPEB3Q8NE35 698 aaKnown RBP15.89■□□□□ 0.13
CHRFAM7A-202ENST00000397827 C14orf79Q96F83 325 aa15.89■□□□□ 0.13
CHRFAM7A-202ENST00000397827 RNF122Q9H9V4 155 aa15.89■□□□□ 0.13
CHRFAM7A-202ENST00000397827 hCG_38984A0A1B0GV85 526 aa15.88■□□□□ 0.13
CHRFAM7A-202ENST00000397827 CA11O75493 328 aa15.88■□□□□ 0.13
CHRFAM7A-202ENST00000397827 OR5H8P0DN80 308 aa15.88■□□□□ 0.13
CHRFAM7A-202ENST00000397827 MPLP40238 635 aa15.88■□□□□ 0.13
CHRFAM7A-202ENST00000397827 RIPPLY2Q5TAB7 128 aa15.88■□□□□ 0.13
CHRFAM7A-202ENST00000397827 CYB5R2Q6BCY4 276 aa15.88■□□□□ 0.13
CHRFAM7A-202ENST00000397827 FBXL14Q8N1E6 418 aa15.88■□□□□ 0.13
CHRFAM7A-202ENST00000397827 TMED6Q8WW62 240 aa15.88■□□□□ 0.13
CHRFAM7A-202ENST00000397827 C2orf50Q96LR7 162 aa15.88■□□□□ 0.13
CHRFAM7A-202ENST00000397827 ZNF850A8MQ14 1090 aa15.88■□□□□ 0.13
CHRFAM7A-202ENST00000397827 ZNF705EA8MWA4 302 aaPredicted RBP15.88■□□□□ 0.13
CHRFAM7A-202ENST00000397827 F8VVB4 439 aa15.88■□□□□ 0.13
CHRFAM7A-202ENST00000397827 F8VWA3 439 aa15.88■□□□□ 0.13
CHRFAM7A-202ENST00000397827 IFNA2P01563 188 aa15.88■□□□□ 0.13
CHRFAM7A-202ENST00000397827 EDN3P14138 238 aa15.88■□□□□ 0.13
CHRFAM7A-202ENST00000397827 RAB2AP61019 212 aa15.88■□□□□ 0.13
CHRFAM7A-202ENST00000397827 PPA1Q15181 289 aa15.88■□□□□ 0.13
CHRFAM7A-202ENST00000397827 SURF2Q15527 256 aaPredicted RBP15.88■□□□□ 0.13
CHRFAM7A-202ENST00000397827 TMEM42Q69YG0 159 aa15.88■□□□□ 0.13
CHRFAM7A-202ENST00000397827 LHFPL2Q6ZUX7 228 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms