RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 CASP6P55212 293 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 RAB11AP62491 216 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 RPL23AP62750 156 aaKnown RBP8.6□□□□□ -1.03
TRIM39-203ENST00000396547 ZNF880Q6PDB4 577 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 TMEM92Q6UXU6 159 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 STX12Q86Y82 276 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 NECAP1Q8NC96 275 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 GPBAR1Q8TDU6 330 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 GTF3AQ92664 365 aaKnown RBP8.6□□□□□ -1.03
TRIM39-203ENST00000396547 MISP3Q96FF7 219 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 TCTN2Q96GX1 697 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 ATG101Q9BSB4 218 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 ZNF160Q9HCG1 818 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 LANCL2Q9NS86 450 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 CUTCQ9NTM9 273 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 PIGLQ9Y2B2 252 aa8.6□□□□□ -1.03
TRIM39-203ENST00000396547 ZFP92A6NM28 416 aa8.59□□□□□ -1.03
TRIM39-203ENST00000396547 H3BP45 60 aa8.59□□□□□ -1.03
TRIM39-203ENST00000396547 TNFRSF10CO14798 259 aa8.59□□□□□ -1.03
TRIM39-203ENST00000396547 SSSCA1O60232 199 aa8.59□□□□□ -1.03
TRIM39-203ENST00000396547 DBHP09172 617 aa8.59□□□□□ -1.03
TRIM39-203ENST00000396547 SLC38A9Q8NBW4 561 aa8.59□□□□□ -1.03
TRIM39-203ENST00000396547 PRSS33Q8NF86 280 aa8.59□□□□□ -1.03
TRIM39-203ENST00000396547 TMEM234Q8WY98 164 aa8.59□□□□□ -1.03
TRIM39-203ENST00000396547 NIPSNAP3BQ9BS92 247 aa8.59□□□□□ -1.03
TRIM39-203ENST00000396547 KLRF1Q9NZS2 232 aa8.59□□□□□ -1.03
TRIM39-203ENST00000396547 GNG13Q9P2W3 67 aa8.59□□□□□ -1.03
TRIM39-203ENST00000396547 WSB1Q9Y6I7 421 aa8.59□□□□□ -1.03
TRIM39-203ENST00000396547 OR5H15A6NDH6 313 aa8.59□□□□□ -1.03
TRIM39-203ENST00000396547 CRYM-AS1A6NIL9 109 aa8.59□□□□□ -1.03
TRIM39-203ENST00000396547 SEC14L6B5MCN3 397 aa8.59□□□□□ -1.03
TRIM39-203ENST00000396547 C10orf142B7Z368 130 aa8.59□□□□□ -1.03
TRIM39-203ENST00000396547 FTCDNL1E5RQL4 147 aa8.59□□□□□ -1.03
TRIM39-203ENST00000396547 TSPAN2O60636 221 aa8.59□□□□□ -1.03
TRIM39-203ENST00000396547 HIST1H1BP16401 226 aaKnown RBP8.59□□□□□ -1.03
TRIM39-203ENST00000396547 MTCP1P56278 107 aa8.59□□□□□ -1.03
TRIM39-203ENST00000396547 LSM6P62312 80 aaKnown RBP8.59□□□□□ -1.03
TRIM39-203ENST00000396547 MRPS21P82921 87 aaKnown RBP8.59□□□□□ -1.03
TRIM39-203ENST00000396547 UEVLDQ8IX04 471 aa8.59□□□□□ -1.03
TRIM39-203ENST00000396547 MAML2Q8IZL2 1156 aaPredicted RBP8.59□□□□□ -1.03
TRIM39-203ENST00000396547 SPEM1Q8N4L4 309 aa8.59□□□□□ -1.03
TRIM39-203ENST00000396547 COMMD1Q8N668 190 aa8.59□□□□□ -1.03
TRIM39-203ENST00000396547 LYPD6BQ8NI32 183 aa8.59□□□□□ -1.03
TRIM39-203ENST00000396547 RNASE11Q8TAA1 199 aaKnown RBP8.59□□□□□ -1.03
TRIM39-203ENST00000396547 THOC3Q96J01 351 aaKnown RBP8.59□□□□□ -1.03
TRIM39-203ENST00000396547 KLHL13Q9P2N7 655 aa8.59□□□□□ -1.03
TRIM39-203ENST00000396547 SMCO3A2RU48 225 aa8.59□□□□□ -1.04
TRIM39-203ENST00000396547 OR5H1A6NKK0 313 aa8.59□□□□□ -1.04
TRIM39-203ENST00000396547 VSTM2BA6NLU5 285 aa8.59□□□□□ -1.04
TRIM39-203ENST00000396547 PRSS47A8MTI9 375 aa8.59□□□□□ -1.04
TRIM39-203ENST00000396547 CYTIPO60759 359 aa8.59□□□□□ -1.04
TRIM39-203ENST00000396547 SEMA4FO95754 770 aa8.59□□□□□ -1.04
TRIM39-203ENST00000396547 IFI6P09912 130 aa8.59□□□□□ -1.04
TRIM39-203ENST00000396547 MYF5P13349 255 aa8.59□□□□□ -1.04
TRIM39-203ENST00000396547 PMELP40967 661 aa8.59□□□□□ -1.04
TRIM39-203ENST00000396547 GUCA1AP43080 201 aaPredicted RBP8.59□□□□□ -1.04
TRIM39-203ENST00000396547 VAMP2P63027 116 aa8.59□□□□□ -1.04
TRIM39-203ENST00000396547 EWSR1Q01844 656 aaKnown RBP eCLIP8.59□□□□□ -1.04
TRIM39-203ENST00000396547 ZNF385CQ66K41 422 aaPredicted RBP8.59□□□□□ -1.04
TRIM39-203ENST00000396547 SLC22A25Q6T423 547 aa8.59□□□□□ -1.04
TRIM39-203ENST00000396547 TGIF2LXQ8IUE1 241 aa8.59□□□□□ -1.04
TRIM39-203ENST00000396547 LMX1AQ8TE12 382 aa8.59□□□□□ -1.04
TRIM39-203ENST00000396547 MALSU1Q96EH3 234 aa8.59□□□□□ -1.04
TRIM39-203ENST00000396547 GINS3Q9BRX5 216 aa8.59□□□□□ -1.04
TRIM39-203ENST00000396547 ANXA10Q9UJ72 324 aa8.59□□□□□ -1.04
TRIM39-203ENST00000396547 TUBD1Q9UJT1 453 aa8.59□□□□□ -1.04
TRIM39-203ENST00000396547 WASF3Q9UPY6 502 aa8.59□□□□□ -1.04
TRIM39-203ENST00000396547 CCDC187A0A096LP49 1063 aa8.58□□□□□ -1.04
TRIM39-203ENST00000396547 NKX2-6A6NCS4 301 aa8.58□□□□□ -1.04
TRIM39-203ENST00000396547 HLA-HP01893 362 aa8.58□□□□□ -1.04
TRIM39-203ENST00000396547 IGKV3-11P04433 115 aa8.58□□□□□ -1.04
TRIM39-203ENST00000396547 CTSDP07339 412 aaPredicted RBP8.58□□□□□ -1.04
TRIM39-203ENST00000396547 HOXC4P09017 264 aaPredicted RBP8.58□□□□□ -1.04
TRIM39-203ENST00000396547 FOLR1P15328 257 aa8.58□□□□□ -1.04
TRIM39-203ENST00000396547 CSNK1A1P48729 337 aa8.58□□□□□ -1.04
TRIM39-203ENST00000396547 TCF15Q12870 199 aa8.58□□□□□ -1.04
TRIM39-203ENST00000396547 HIST2H3PS2Q5TEC6 136 aa8.58□□□□□ -1.04
TRIM39-203ENST00000396547 DTX1Q86Y01 620 aa8.58□□□□□ -1.04
TRIM39-203ENST00000396547 OR10AD1Q8NGE0 317 aa8.58□□□□□ -1.04
TRIM39-203ENST00000396547 OR2AE1Q8NHA4 323 aa8.58□□□□□ -1.04
TRIM39-203ENST00000396547 FAM210BQ96KR6 192 aa8.58□□□□□ -1.04
TRIM39-203ENST00000396547 PACRGQ96M98 296 aaPredicted RBP8.58□□□□□ -1.04
TRIM39-203ENST00000396547 NAA60Q9H7X0 242 aa8.58□□□□□ -1.04
TRIM39-203ENST00000396547 STRAPQ9Y3F4 350 aaKnown RBP8.58□□□□□ -1.04
TRIM39-203ENST00000396547 SIT1Q9Y3P8 196 aa8.58□□□□□ -1.04
TRIM39-203ENST00000396547 PIAS3Q9Y6X2 628 aa8.58□□□□□ -1.04
TRIM39-203ENST00000396547 PCDH15Q96QU1 1955 aa8.58□□□□□ -1.04
TRIM39-203ENST00000396547 CEACAM18A8MTB9 384 aa8.58□□□□□ -1.04
TRIM39-203ENST00000396547 H3BMH7 237 aa8.58□□□□□ -1.04
TRIM39-203ENST00000396547 HSD17B6O14756 317 aa8.58□□□□□ -1.04
TRIM39-203ENST00000396547 ZNHIT1O43257 154 aa8.58□□□□□ -1.04
TRIM39-203ENST00000396547 PNLIPP16233 465 aa8.58□□□□□ -1.04
TRIM39-203ENST00000396547 DUSP1P28562 367 aa8.58□□□□□ -1.04
TRIM39-203ENST00000396547 MYBPHQ13203 477 aa8.58□□□□□ -1.04
TRIM39-203ENST00000396547 FZD2Q14332 565 aa8.58□□□□□ -1.04
TRIM39-203ENST00000396547 WDR5BQ86VZ2 330 aa8.58□□□□□ -1.04
TRIM39-203ENST00000396547 LRP11Q86VZ4 500 aa8.58□□□□□ -1.04
TRIM39-203ENST00000396547 HIST3H2BBQ8N257 126 aa8.58□□□□□ -1.04
TRIM39-203ENST00000396547 OR5C1Q8NGR4 320 aa8.58□□□□□ -1.04
TRIM39-203ENST00000396547 ABHD5Q8WTS1 349 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms