RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 LPLP06858 475 aa17.24■□□□□ 0.35
VCPKMT-202ENST00000395860 GNG2P59768 71 aa17.24■□□□□ 0.35
VCPKMT-202ENST00000395860 IKZF1Q13422 519 aa17.24■□□□□ 0.35
VCPKMT-202ENST00000395860 IL13RA2Q14627 380 aa17.24■□□□□ 0.35
VCPKMT-202ENST00000395860 TESK1Q15569 626 aa17.24■□□□□ 0.35
VCPKMT-202ENST00000395860 PNLIPRP3Q17RR3 467 aa17.24■□□□□ 0.35
VCPKMT-202ENST00000395860 ATAD3CQ5T2N8 411 aa17.24■□□□□ 0.35
VCPKMT-202ENST00000395860 TOMM5Q8N4H5 51 aa17.24■□□□□ 0.35
VCPKMT-202ENST00000395860 ERGIC1Q969X5 290 aa17.24■□□□□ 0.35
VCPKMT-202ENST00000395860 EGLN1Q9GZT9 426 aa17.24■□□□□ 0.35
VCPKMT-202ENST00000395860 HES4Q9HCC6 221 aa17.24■□□□□ 0.35
VCPKMT-202ENST00000395860 GCM1Q9NP62 436 aa17.24■□□□□ 0.35
VCPKMT-202ENST00000395860 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.24■□□□□ 0.35
VCPKMT-202ENST00000395860 FAIMQ9NVQ4 179 aa17.24■□□□□ 0.35
VCPKMT-202ENST00000395860 TBC1D24Q9ULP9 559 aa17.24■□□□□ 0.35
VCPKMT-202ENST00000395860 HSF4Q9ULV5 492 aa17.24■□□□□ 0.35
VCPKMT-202ENST00000395860 RBMX2Q9Y388 322 aaKnown RBP17.24■□□□□ 0.35
VCPKMT-202ENST00000395860 DYSFO75923 2080 aa17.24■□□□□ 0.35
VCPKMT-202ENST00000395860 H7C417 338 aa17.23■□□□□ 0.35
VCPKMT-202ENST00000395860 PDCD6O75340 191 aa17.23■□□□□ 0.35
VCPKMT-202ENST00000395860 CHATP28329 748 aa17.23■□□□□ 0.35
VCPKMT-202ENST00000395860 DUSP1P28562 367 aa17.23■□□□□ 0.35
VCPKMT-202ENST00000395860 ARFRP1Q13795 201 aa17.23■□□□□ 0.35
VCPKMT-202ENST00000395860 SETD6Q8TBK2 473 aa17.23■□□□□ 0.35
VCPKMT-202ENST00000395860 NUDCD2Q8WVJ2 157 aa17.23■□□□□ 0.35
VCPKMT-202ENST00000395860 MTFP1Q9UDX5 166 aa17.23■□□□□ 0.35
VCPKMT-202ENST00000395860 CACNA1DQ01668 2161 aa17.23■□□□□ 0.35
VCPKMT-202ENST00000395860 SERPINE3A8MV23 424 aa17.23■□□□□ 0.35
VCPKMT-202ENST00000395860 HS3ST1O14792 307 aa17.23■□□□□ 0.35
VCPKMT-202ENST00000395860 WNT9BO14905 357 aa17.23■□□□□ 0.35
VCPKMT-202ENST00000395860 FUT3P21217 361 aa17.23■□□□□ 0.35
VCPKMT-202ENST00000395860 PCGF3Q3KNV8 242 aa17.23■□□□□ 0.35
VCPKMT-202ENST00000395860 TRAPPC6BQ86SZ2 158 aa17.23■□□□□ 0.35
VCPKMT-202ENST00000395860 ST8SIA4Q92187 359 aa17.23■□□□□ 0.35
VCPKMT-202ENST00000395860 CYYR1Q96J86 154 aa17.23■□□□□ 0.35
VCPKMT-202ENST00000395860 WDR13Q9H1Z4 485 aa17.23■□□□□ 0.35
VCPKMT-202ENST00000395860 SAP30LQ9HAJ7 183 aa17.23■□□□□ 0.35
VCPKMT-202ENST00000395860 ARFGEF3Q5TH69 2177 aa17.22■□□□□ 0.35
VCPKMT-202ENST00000395860 ROS1P08922 2347 aa17.22■□□□□ 0.35
VCPKMT-202ENST00000395860 H3BUI4 141 aa17.22■□□□□ 0.35
VCPKMT-202ENST00000395860 GSTT2BP0CG30 244 aa17.22■□□□□ 0.35
VCPKMT-202ENST00000395860 CFHR2P36980 270 aa17.22■□□□□ 0.35
VCPKMT-202ENST00000395860 PMELP40967 661 aa17.22■□□□□ 0.35
VCPKMT-202ENST00000395860 SPIN3Q5JUX0 258 aa17.22■□□□□ 0.35
VCPKMT-202ENST00000395860 ACP7Q6ZNF0 438 aa17.22■□□□□ 0.35
VCPKMT-202ENST00000395860 OR11L1Q8NGX0 322 aa17.22■□□□□ 0.35
VCPKMT-202ENST00000395860 FAAP24Q9BTP7 215 aa17.22■□□□□ 0.35
VCPKMT-202ENST00000395860 CBLN4Q9NTU7 201 aa17.22■□□□□ 0.35
VCPKMT-202ENST00000395860 PPP1R3CQ9UQK1 317 aa17.22■□□□□ 0.35
VCPKMT-202ENST00000395860 SRRM5B3KS81 715 aa17.21■□□□□ 0.35
VCPKMT-202ENST00000395860 ECDO95905 644 aaPredicted RBP17.21■□□□□ 0.35
VCPKMT-202ENST00000395860 ACTBP60709 375 aa17.21■□□□□ 0.35
VCPKMT-202ENST00000395860 ACTG1P63261 375 aa17.21■□□□□ 0.35
VCPKMT-202ENST00000395860 SSBP1Q04837 148 aaKnown RBP17.21■□□□□ 0.35
VCPKMT-202ENST00000395860 ASAH1Q13510 395 aa17.21■□□□□ 0.35
VCPKMT-202ENST00000395860 SMIM21Q3B7S5 101 aa17.21■□□□□ 0.35
VCPKMT-202ENST00000395860 AGAP6Q5VW22 663 aa17.21■□□□□ 0.35
VCPKMT-202ENST00000395860 BRICD5Q6PL45 260 aa17.21■□□□□ 0.35
VCPKMT-202ENST00000395860 BOLLQ8N9W6 283 aaKnown RBP17.21■□□□□ 0.35
VCPKMT-202ENST00000395860 SULT4A1Q9BR01 284 aa17.21■□□□□ 0.35
VCPKMT-202ENST00000395860 RASL12Q9NYN1 266 aa17.21■□□□□ 0.35
VCPKMT-202ENST00000395860 FAM208BQ5VWN6 2430 aa17.21■□□□□ 0.35
VCPKMT-202ENST00000395860 A0A1W2PPR1 153 aa17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 PLA2G10O15496 165 aa17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 GOSR1O95249 250 aa17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 ZNF44P15621 663 aa17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 EGR1P18146 543 aa17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 RBMXP38159 391 aaKnown RBP17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 HOXA4Q00056 320 aaPredicted RBP17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 ZNF146Q15072 292 aa17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 DCDC5Q6ZRR9 648 aa17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 GCSAMQ8N6F7 178 aa17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 Q8TCH9 128 aa17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 COX4I2Q96KJ9 171 aa17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 VRK1Q99986 396 aaPredicted RBP17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 SPOCK3Q9BQ16 436 aa17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 SPACA1Q9HBV2 294 aa17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 TREM2Q9NZC2 230 aa17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 RNF7Q9UBF6 113 aa17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 GLS2Q9UI32 602 aa17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 SH2D1BO14796 132 aa17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 DEGS1O15121 323 aa17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 SSX5O60225 188 aa17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 CA11O75493 328 aa17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 FCER2P06734 321 aa17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 IRF2P14316 349 aa17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 PLA2G2AP14555 144 aa17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 PPOXP50336 477 aa17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 AP3S2P59780 193 aa17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 MRPS15P82914 257 aaKnown RBP17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 KLF9Q13886 244 aaPredicted RBP17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 IFT46Q9NQC8 304 aa17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 TAS2R8Q9NYW2 309 aa17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 RCC2Q9P258 522 aaKnown RBP17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 OR14J1Q9UGF5 321 aa17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 FBXO9Q9UK97 447 aaPredicted RBP17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 CACNG2Q9Y698 323 aa17.2■□□□□ 0.34
VCPKMT-202ENST00000395860 TANC2Q9HCD6 1990 aa17.19■□□□□ 0.34
VCPKMT-202ENST00000395860 ANKRD20A5PA0PJZ0 165 aa17.19■□□□□ 0.34
VCPKMT-202ENST00000395860 UBE2QL1A1L167 161 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms