RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 ACTA1P68133 377 aa13.06□□□□□ -0.32
CXCL12-206ENST00000395795 PDLIM3Q53GG5 364 aaPredicted RBP13.06□□□□□ -0.32
CXCL12-206ENST00000395795 TMEM244Q5VVB8 128 aa13.06□□□□□ -0.32
CXCL12-206ENST00000395795 MEDAGQ5VYS4 303 aa13.06□□□□□ -0.32
CXCL12-206ENST00000395795 ACBD7Q8N6N7 88 aa13.06□□□□□ -0.32
CXCL12-206ENST00000395795 RHOXF1Q8NHV9 184 aa13.06□□□□□ -0.32
CXCL12-206ENST00000395795 WIPF2Q8TF74 440 aaPredicted RBP13.06□□□□□ -0.32
CXCL12-206ENST00000395795 APH1BQ8WW43 257 aa13.06□□□□□ -0.32
CXCL12-206ENST00000395795 CFHR4Q92496 578 aa13.06□□□□□ -0.32
CXCL12-206ENST00000395795 C4orf36Q96KX1 117 aa13.06□□□□□ -0.32
CXCL12-206ENST00000395795 ISG20L2Q9H9L3 353 aaKnown RBP13.06□□□□□ -0.32
CXCL12-206ENST00000395795 IMPAD1Q9NX62 359 aa13.06□□□□□ -0.32
CXCL12-206ENST00000395795 A0A1W2PPH5 198 aa13.05□□□□□ -0.32
CXCL12-206ENST00000395795 DAPL1A0PJW8 107 aa13.05□□□□□ -0.32
CXCL12-206ENST00000395795 MT-ND2P03891 347 aa13.05□□□□□ -0.32
CXCL12-206ENST00000395795 DBTP11182 482 aaKnown RBP13.05□□□□□ -0.32
CXCL12-206ENST00000395795 GABRA5P31644 462 aa13.05□□□□□ -0.32
CXCL12-206ENST00000395795 OR3A1P47881 315 aa13.05□□□□□ -0.32
CXCL12-206ENST00000395795 MEF2CQ06413 473 aaPredicted RBP13.05□□□□□ -0.32
CXCL12-206ENST00000395795 PDZK1IP1Q13113 114 aa13.05□□□□□ -0.32
CXCL12-206ENST00000395795 CNN3Q15417 329 aaKnown RBP13.05□□□□□ -0.32
CXCL12-206ENST00000395795 ZFP1Q6P2D0 407 aa13.05□□□□□ -0.32
CXCL12-206ENST00000395795 BAIAP2L2Q6UXY1 529 aa13.05□□□□□ -0.32
CXCL12-206ENST00000395795 FAM220AQ7Z4H9 259 aa13.05□□□□□ -0.32
CXCL12-206ENST00000395795 FAM58AQ8N1B3 248 aa13.05□□□□□ -0.32
CXCL12-206ENST00000395795 Q8N2B8 174 aa13.05□□□□□ -0.32
CXCL12-206ENST00000395795 EMG1Q92979 244 aaKnown RBP13.05□□□□□ -0.32
CXCL12-206ENST00000395795 ADI1Q9BV57 179 aa13.05□□□□□ -0.32
CXCL12-206ENST00000395795 CHST6Q9GZX3 395 aa13.05□□□□□ -0.32
CXCL12-206ENST00000395795 ZNF702PQ9H963 129 aa13.05□□□□□ -0.32
CXCL12-206ENST00000395795 HMG20AQ9NP66 347 aa13.05□□□□□ -0.32
CXCL12-206ENST00000395795 FOXJ3Q9UPW0 622 aa13.05□□□□□ -0.32
CXCL12-206ENST00000395795 A6NDX4 124 aa13.04□□□□□ -0.32
CXCL12-206ENST00000395795 KDM4BO94953 1096 aa13.04□□□□□ -0.32
CXCL12-206ENST00000395795 POU3F4P49335 361 aa13.04□□□□□ -0.32
CXCL12-206ENST00000395795 ATP1B3P54709 279 aa13.04□□□□□ -0.32
CXCL12-206ENST00000395795 MTCP1P56278 107 aa13.04□□□□□ -0.32
CXCL12-206ENST00000395795 EDDM3BP56851 147 aa13.04□□□□□ -0.32
CXCL12-206ENST00000395795 ZP1P60852 638 aa13.04□□□□□ -0.32
CXCL12-206ENST00000395795 ALKBH1Q13686 389 aaKnown RBP13.04□□□□□ -0.32
CXCL12-206ENST00000395795 GALEQ14376 348 aa13.04□□□□□ -0.32
CXCL12-206ENST00000395795 UTF1Q5T230 341 aa13.04□□□□□ -0.32
CXCL12-206ENST00000395795 LHFPL3Q86UP9 236 aa13.04□□□□□ -0.32
CXCL12-206ENST00000395795 RFT1Q96AA3 541 aa13.04□□□□□ -0.32
CXCL12-206ENST00000395795 SPSB1Q96BD6 273 aa13.04□□□□□ -0.32
CXCL12-206ENST00000395795 ZNF714Q96N38 554 aa13.04□□□□□ -0.32
CXCL12-206ENST00000395795 SPACA5Q96QH8 159 aa13.04□□□□□ -0.32
CXCL12-206ENST00000395795 RANBP3Q9H6Z4 567 aaPredicted RBP13.04□□□□□ -0.32
CXCL12-206ENST00000395795 AMBNQ9NP70 447 aa13.04□□□□□ -0.32
CXCL12-206ENST00000395795 SERTAD4Q9NUC0 356 aa13.04□□□□□ -0.32
CXCL12-206ENST00000395795 MRPS18AQ9NVS2 196 aaKnown RBP13.04□□□□□ -0.32
CXCL12-206ENST00000395795 HHLA2Q9UM44 414 aa13.04□□□□□ -0.32
CXCL12-206ENST00000395795 TCF19Q9Y242 345 aa13.04□□□□□ -0.32
CXCL12-206ENST00000395795 TBL2Q9Y4P3 447 aaKnown RBP13.04□□□□□ -0.32
CXCL12-206ENST00000395795 LINC00312Q9Y6C7 94 aa13.04□□□□□ -0.32
CXCL12-206ENST00000395795 J3QLW9 94 aa13.03□□□□□ -0.32
CXCL12-206ENST00000395795 ZFPL1O95159 310 aa13.03□□□□□ -0.32
CXCL12-206ENST00000395795 SERPINA3P01011 423 aa13.03□□□□□ -0.32
CXCL12-206ENST00000395795 ARG1P05089 322 aa13.03□□□□□ -0.32
CXCL12-206ENST00000395795 HTR1AP08908 422 aa13.03□□□□□ -0.32
CXCL12-206ENST00000395795 ZNF19P17023 458 aa13.03□□□□□ -0.32
CXCL12-206ENST00000395795 PRKACBP22694 351 aa13.03□□□□□ -0.32
CXCL12-206ENST00000395795 LMO1P25800 156 aa13.03□□□□□ -0.32
CXCL12-206ENST00000395795 GDNFP39905 211 aa13.03□□□□□ -0.32
CXCL12-206ENST00000395795 EDDM3AQ14507 147 aa13.03□□□□□ -0.32
CXCL12-206ENST00000395795 FBLN7Q53RD9 439 aa13.03□□□□□ -0.32
CXCL12-206ENST00000395795 Q6P435 159 aa13.03□□□□□ -0.32
CXCL12-206ENST00000395795 Q6ZS46 218 aa13.03□□□□□ -0.32
CXCL12-206ENST00000395795 LHFPL2Q6ZUX7 228 aa13.03□□□□□ -0.32
CXCL12-206ENST00000395795 GDPD3Q7L5L3 318 aa13.03□□□□□ -0.32
CXCL12-206ENST00000395795 Q8IYB0 196 aa13.03□□□□□ -0.32
CXCL12-206ENST00000395795 SYS1Q8N2H4 156 aa13.03□□□□□ -0.32
CXCL12-206ENST00000395795 OR13C9Q8NGT0 318 aa13.03□□□□□ -0.32
CXCL12-206ENST00000395795 RGP1Q92546 391 aaPredicted RBP13.03□□□□□ -0.32
CXCL12-206ENST00000395795 MALSU1Q96EH3 234 aa13.03□□□□□ -0.32
CXCL12-206ENST00000395795 OPALINQ96PE5 141 aa13.03□□□□□ -0.32
CXCL12-206ENST00000395795 ALG8Q9BVK2 526 aa13.03□□□□□ -0.32
CXCL12-206ENST00000395795 COMMD4Q9H0A8 199 aa13.03□□□□□ -0.32
CXCL12-206ENST00000395795 S100A14Q9HCY8 104 aa13.03□□□□□ -0.32
CXCL12-206ENST00000395795 hCG_1809904A0A1W2PP81 198 aa13.02□□□□□ -0.33
CXCL12-206ENST00000395795 A0A1W2PPE2 198 aa13.02□□□□□ -0.33
CXCL12-206ENST00000395795 A0A1W2PR64 198 aa13.02□□□□□ -0.33
CXCL12-206ENST00000395795 A0A1W2PRV1 198 aa13.02□□□□□ -0.33
CXCL12-206ENST00000395795 ERICH4A6NGS2 130 aa13.02□□□□□ -0.33
CXCL12-206ENST00000395795 WBP4O75554 376 aaKnown RBP13.02□□□□□ -0.33
CXCL12-206ENST00000395795 ALX3O95076 343 aa13.02□□□□□ -0.33
CXCL12-206ENST00000395795 OR2H2O95918 312 aa13.02□□□□□ -0.33
CXCL12-206ENST00000395795 PRKACAP17612 351 aa13.02□□□□□ -0.33
CXCL12-206ENST00000395795 ERP29P30040 261 aaKnown RBP13.02□□□□□ -0.33
CXCL12-206ENST00000395795 DYNLT3P51808 116 aa13.02□□□□□ -0.33
CXCL12-206ENST00000395795 HABP2Q14520 560 aaPredicted RBP13.02□□□□□ -0.33
CXCL12-206ENST00000395795 HERPUD1Q15011 391 aa13.02□□□□□ -0.33
CXCL12-206ENST00000395795 CDK5R1Q15078 307 aa13.02□□□□□ -0.33
CXCL12-206ENST00000395795 GRK1Q15835 563 aa13.02□□□□□ -0.33
CXCL12-206ENST00000395795 PLA1AQ53H76 456 aa13.02□□□□□ -0.33
CXCL12-206ENST00000395795 SPIN3Q5JUX0 258 aa13.02□□□□□ -0.33
CXCL12-206ENST00000395795 ZNF529Q6P280 563 aa13.02□□□□□ -0.33
CXCL12-206ENST00000395795 LIAT1Q6ZQX7 453 aa13.02□□□□□ -0.33
CXCL12-206ENST00000395795 OR52I1Q8NGK6 324 aa13.02□□□□□ -0.33
CXCL12-206ENST00000395795 OR13D1Q8NGV5 346 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms