RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 CCL3L1P16619 93 aa25.15■■□□□ 1.62
CMTM4-202ENST00000394106 UBE2E1P51965 193 aa25.15■■□□□ 1.62
CMTM4-202ENST00000394106 EDDM3BP56851 147 aa25.15■■□□□ 1.62
CMTM4-202ENST00000394106 ZNF273Q14593 569 aa25.15■■□□□ 1.62
CMTM4-202ENST00000394106 CDK5R1Q15078 307 aa25.15■■□□□ 1.62
CMTM4-202ENST00000394106 CCDC58Q4VC31 144 aa25.15■■□□□ 1.62
CMTM4-202ENST00000394106 GDPD3Q7L5L3 318 aa25.15■■□□□ 1.62
CMTM4-202ENST00000394106 TMEM86BQ8N661 226 aa25.15■■□□□ 1.62
CMTM4-202ENST00000394106 TBC1D15Q8TC07 691 aa25.15■■□□□ 1.62
CMTM4-202ENST00000394106 RGP1Q92546 391 aaPredicted RBP25.15■■□□□ 1.62
CMTM4-202ENST00000394106 GGHQ92820 318 aa25.15■■□□□ 1.62
CMTM4-202ENST00000394106 NKX1-2Q9UD57 310 aaPredicted RBP25.15■■□□□ 1.62
CMTM4-202ENST00000394106 POMT1Q9Y6A1 747 aa25.15■■□□□ 1.62
CMTM4-202ENST00000394106 IGKV1-12A0A0C4DH73 117 aa25.14■■□□□ 1.62
CMTM4-202ENST00000394106 MEIOCA2RUB1 952 aa25.14■■□□□ 1.62
CMTM4-202ENST00000394106 FAM181BA6NEQ2 426 aa25.14■■□□□ 1.62
CMTM4-202ENST00000394106 IGKV1D-12P01611 117 aa25.14■■□□□ 1.62
CMTM4-202ENST00000394106 IGHV4-59P01825 116 aa25.14■■□□□ 1.62
CMTM4-202ENST00000394106 SAA4P35542 130 aa25.14■■□□□ 1.62
CMTM4-202ENST00000394106 MED21Q13503 144 aa25.14■■□□□ 1.62
CMTM4-202ENST00000394106 LDLRAD3Q86YD5 345 aa25.14■■□□□ 1.62
CMTM4-202ENST00000394106 BABAM2Q9NXR7 383 aa25.14■■□□□ 1.62
CMTM4-202ENST00000394106 TMEM82A0PJX8 343 aa25.13■■□□□ 1.61
CMTM4-202ENST00000394106 MEX3AA1L020 520 aaKnown RBP25.13■■□□□ 1.61
CMTM4-202ENST00000394106 FBP1P09467 338 aa25.13■■□□□ 1.61
CMTM4-202ENST00000394106 GABRR1P24046 479 aa25.13■■□□□ 1.61
CMTM4-202ENST00000394106 ST3GAL4Q11206 333 aa25.13■■□□□ 1.61
CMTM4-202ENST00000394106 EDDM3AQ14507 147 aa25.13■■□□□ 1.61
CMTM4-202ENST00000394106 HCP5Q6MZN7 132 aa25.13■■□□□ 1.61
CMTM4-202ENST00000394106 OR8H2Q8N162 312 aa25.13■■□□□ 1.61
CMTM4-202ENST00000394106 GPR148Q8TDV2 347 aa25.13■■□□□ 1.61
CMTM4-202ENST00000394106 SNX22Q96L94 193 aa25.13■■□□□ 1.61
CMTM4-202ENST00000394106 HMG20AQ9NP66 347 aa25.13■■□□□ 1.61
CMTM4-202ENST00000394106 GLS2Q9UI32 602 aa25.13■■□□□ 1.61
CMTM4-202ENST00000394106 SF3B6Q9Y3B4 125 aaKnown RBP25.13■■□□□ 1.61
CMTM4-202ENST00000394106 SIRT4Q9Y6E7 314 aaPredicted RBP25.13■■□□□ 1.61
CMTM4-202ENST00000394106 PAHP00439 452 aa25.12■■□□□ 1.61
CMTM4-202ENST00000394106 OMGP23515 440 aa25.12■■□□□ 1.61
CMTM4-202ENST00000394106 IER3P46695 156 aa25.12■■□□□ 1.61
CMTM4-202ENST00000394106 C17orf107Q6ZR85 190 aa25.12■■□□□ 1.61
CMTM4-202ENST00000394106 CHST6Q9GZX3 395 aa25.12■■□□□ 1.61
CMTM4-202ENST00000394106 GSTK1Q9Y2Q3 226 aa25.12■■□□□ 1.61
CMTM4-202ENST00000394106 hCG_1809904A0A1W2PP81 198 aa25.11■■□□□ 1.61
CMTM4-202ENST00000394106 A0A1W2PPE2 198 aa25.11■■□□□ 1.61
CMTM4-202ENST00000394106 A0A1W2PR64 198 aa25.11■■□□□ 1.61
CMTM4-202ENST00000394106 A0A1W2PRV1 198 aa25.11■■□□□ 1.61
CMTM4-202ENST00000394106 EFCAB10A6NFE3 127 aa25.11■■□□□ 1.61
CMTM4-202ENST00000394106 XPNPEP2O43895 674 aa25.11■■□□□ 1.61
CMTM4-202ENST00000394106 KDM4BO94953 1096 aa25.11■■□□□ 1.61
CMTM4-202ENST00000394106 ALX3O95076 343 aa25.11■■□□□ 1.61
CMTM4-202ENST00000394106 CRYBA1P05813 215 aa25.11■■□□□ 1.61
CMTM4-202ENST00000394106 TMEM225BP0DP42 221 aa25.11■■□□□ 1.61
CMTM4-202ENST00000394106 RAB3AP20336 220 aa25.11■■□□□ 1.61
CMTM4-202ENST00000394106 ERVFRD-1P60508 538 aa25.11■■□□□ 1.61
CMTM4-202ENST00000394106 SLC34A1Q06495 639 aa25.11■■□□□ 1.61
CMTM4-202ENST00000394106 GABPB1Q06547 395 aaPredicted RBP25.11■■□□□ 1.61
CMTM4-202ENST00000394106 ZNF146Q15072 292 aa25.11■■□□□ 1.61
CMTM4-202ENST00000394106 KISS1Q15726 138 aa25.11■■□□□ 1.61
CMTM4-202ENST00000394106 GRK1Q15835 563 aa25.11■■□□□ 1.61
CMTM4-202ENST00000394106 SPIN3Q5JUX0 258 aa25.11■■□□□ 1.61
CMTM4-202ENST00000394106 LAIR2Q6ISS4 152 aa25.11■■□□□ 1.61
CMTM4-202ENST00000394106 CRIP3Q6Q6R5 217 aa25.11■■□□□ 1.61
CMTM4-202ENST00000394106 OR52N1Q8NH53 320 aa25.11■■□□□ 1.61
CMTM4-202ENST00000394106 RPS4Y2Q8TD47 263 aa25.11■■□□□ 1.61
CMTM4-202ENST00000394106 TAS2R4Q9NYW5 299 aa25.11■■□□□ 1.61
CMTM4-202ENST00000394106 LALBAP00709 142 aa25.1■■□□□ 1.61
CMTM4-202ENST00000394106 ACSM1Q08AH1 577 aa25.1■■□□□ 1.61
CMTM4-202ENST00000394106 SAXO1Q8IYX7 474 aa25.1■■□□□ 1.61
CMTM4-202ENST00000394106 C11orf42Q8N5U0 333 aa25.1■■□□□ 1.61
CMTM4-202ENST00000394106 ZSCAN4Q8NAM6 433 aaPredicted RBP25.1■■□□□ 1.61
CMTM4-202ENST00000394106 OR52N4Q8NGI2 321 aa25.1■■□□□ 1.61
CMTM4-202ENST00000394106 DPAGT1Q9H3H5 408 aa25.1■■□□□ 1.61
CMTM4-202ENST00000394106 HEXA-AS1Q9H8Q6 139 aa25.1■■□□□ 1.61
CMTM4-202ENST00000394106 SEBOXQ9HB31 216 aaPredicted RBP25.1■■□□□ 1.61
CMTM4-202ENST00000394106 ZNRD1Q9P1U0 126 aa25.1■■□□□ 1.61
CMTM4-202ENST00000394106 ERICH4A6NGS2 130 aa25.09■■□□□ 1.61
CMTM4-202ENST00000394106 SIRPB1O00241 398 aa25.09■■□□□ 1.61
CMTM4-202ENST00000394106 OGG1O15527 345 aa25.09■■□□□ 1.61
CMTM4-202ENST00000394106 CD2P06729 351 aa25.09■■□□□ 1.61
CMTM4-202ENST00000394106 COX7A1P24310 79 aa25.09■■□□□ 1.61
CMTM4-202ENST00000394106 ZNF782Q6ZMW2 699 aaPredicted RBP25.09■■□□□ 1.61
CMTM4-202ENST00000394106 AHSA2Q719I0 299 aa25.09■■□□□ 1.61
CMTM4-202ENST00000394106 SATL1Q86VE3 508 aa25.09■■□□□ 1.61
CMTM4-202ENST00000394106 ZFP41Q8N8Y5 198 aa25.09■■□□□ 1.61
CMTM4-202ENST00000394106 BPIFB6Q8NFQ5 453 aa25.09■■□□□ 1.61
CMTM4-202ENST00000394106 OR51A2Q8NGJ7 313 aa25.09■■□□□ 1.61
CMTM4-202ENST00000394106 SMIM19Q96E16 107 aa25.09■■□□□ 1.61
CMTM4-202ENST00000394106 EXOSC4Q9NPD3 245 aaKnown RBP25.09■■□□□ 1.61
CMTM4-202ENST00000394106 CNOT2Q9NZN8 540 aaKnown RBP25.09■■□□□ 1.61
CMTM4-202ENST00000394106 PCDHGB5Q9Y5G0 923 aa25.09■■□□□ 1.61
CMTM4-202ENST00000394106 SH2D1BO14796 132 aa25.08■■□□□ 1.61
CMTM4-202ENST00000394106 MAGEB3O15480 346 aa25.08■■□□□ 1.61
CMTM4-202ENST00000394106 PSPNO60542 156 aa25.08■■□□□ 1.61
CMTM4-202ENST00000394106 ZP1P60852 638 aa25.08■■□□□ 1.61
CMTM4-202ENST00000394106 STX19Q8N4C7 294 aa25.08■■□□□ 1.61
CMTM4-202ENST00000394106 TPRX1Q8N7U7 411 aa25.08■■□□□ 1.61
CMTM4-202ENST00000394106 OR4S1Q8NGB4 309 aa25.08■■□□□ 1.61
CMTM4-202ENST00000394106 FBLIM1Q8WUP2 373 aa25.08■■□□□ 1.61
CMTM4-202ENST00000394106 TFAP2CQ92754 450 aa25.08■■□□□ 1.61
CMTM4-202ENST00000394106 TMEM106AQ96A25 262 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms