RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 OR52N4Q8NGI2 321 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 OR10K1Q8NGX5 313 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 RPS4Y2Q8TD47 263 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 GPR148Q8TDV2 347 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 TMEM106AQ96A25 262 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 SMIM19Q96E16 107 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 PGLYRP3Q96LB9 341 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 OR5M11Q96RB7 305 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 FAM192AQ9GZU8 254 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 PLCXD1Q9NUJ7 323 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 ZNF281Q9Y2X9 895 aa6.3□□□□□ -1.4
HMGB3P1-201ENST00000393368 COL6A5A8TX70 2615 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 IGHV1-69DA0A0B4J2H0 117 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 RNASEK-C17orf49H0YIS7 233 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 H0YJX3 145 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 GABRPO00591 440 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 HOXA3O43365 443 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 ZNF737O75373 536 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 KDM4BO94953 1096 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 CYB5AP00167 134 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 IGHV1-69P01742 117 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 MT-ND2P03891 347 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 TK1P04183 234 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 CDK1P06493 297 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 TMEM225BP0DP42 221 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 CELP19835 753 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 RAB3AP20336 220 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 MYF6P23409 242 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 GABRR1P24046 479 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 PAX6P26367 422 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 OR3A4PP47883 348 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 CAV3P56539 151 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 WNT4P56705 351 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 EDDM3BP56851 147 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 RPL31P62899 125 aaKnown RBP6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 UBA52P62987 128 aaKnown RBP6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 ACTG1P63261 375 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 MED21Q13503 144 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 INSL4Q14641 139 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 TUSC1Q2TAM9 212 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 TMEM200BQ69YZ2 307 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 ZNF529Q6P280 563 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 METAP1DQ6UB28 335 aaPredicted RBP6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 RBMS3Q6XE24 437 aaKnown RBP6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 C9orf139Q6ZV77 190 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 USP43Q70EL4 1123 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 MKXQ8IYA7 352 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 FAM58AQ8N1B3 248 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 ZNF561Q8N587 486 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 NANOGP1Q8N7R0 232 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 OR4S1Q8NGB4 309 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 OR5D14Q8NGL3 314 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 C8orf46Q8TAG6 207 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 TNFAIP8L1Q8WVP5 186 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 CNBD2Q96M20 576 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 OR14A2Q96R54 314 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 ANKRD60Q9BZ19 345 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 ING3Q9NXR8 418 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 GSTK1Q9Y2Q3 226 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 KPTNQ9Y664 436 aa6.29□□□□□ -1.4
HMGB3P1-201ENST00000393368 TRAV8-7A0A075B6U6 113 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 TRBV23-1A0A0A0MS06 115 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 A0A0A6YYJ9 748 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 TRBV5-5A0A0J9YX44 114 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 TRIM77I1YAP6 450 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 K7N7A8 449 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 HSPB6O14558 160 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 PSPNO60542 156 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 CDRT1O95170 752 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 OR2H2O95918 312 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 CHRM2P08172 466 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 COX7A1P24310 79 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 MAP2K4P45985 399 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 OR3A1P47881 315 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 SLC35A2P78381 396 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 SCN1BQ07699 218 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 SLC9A3R2Q15599 337 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 GRK1Q15835 563 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 DDI2Q5TDH0 399 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 HCP5Q6MZN7 132 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 ZNF782Q6ZMW2 699 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 C17orf107Q6ZR85 190 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 TCF23Q7RTU1 214 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 CMTM4Q8IZR5 234 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 KIR3DL3Q8N743 410 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 HAVCR2Q8TDQ0 301 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 C17orf50Q8WW18 174 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 TNFRSF14Q92956 283 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 NR1H4Q96RI1 486 aaPredicted RBP6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 GPER1Q99527 375 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 CCDC90BQ9GZT6 254 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 VCX3BQ9H321 246 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 HMG20AQ9NP66 347 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 ZNF581Q9P0T4 197 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 ERGIC3Q9Y282 383 aa6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 LSM2Q9Y333 95 aaKnown RBP6.28□□□□□ -1.4
HMGB3P1-201ENST00000393368 TRBV5-7A0A0A0MS05 114 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 A0A1W2PP11 408 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 MEIOCA2RUB1 952 aa6.27□□□□□ -1.41
HMGB3P1-201ENST00000393368 M0R1W7 72 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms