RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 F5H697 171 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 CDKN2AP42771 156 aaKnown RBP14.38□□□□□ -0.11
SHANK1-204ENST00000391814 PLP1P60201 277 aa14.38□□□□□ -0.11
SHANK1-204ENST00000391814 RGS7BPQ6MZT1 257 aaPredicted RBP14.38□□□□□ -0.11
SHANK1-204ENST00000391814 OR2W5A6NFC9 320 aa14.37□□□□□ -0.11
SHANK1-204ENST00000391814 CHST1O43916 411 aa14.37□□□□□ -0.11
SHANK1-204ENST00000391814 IGLV3-25P01717 112 aa14.37□□□□□ -0.11
SHANK1-204ENST00000391814 NRIP2Q9BQI9 281 aa14.37□□□□□ -0.11
SHANK1-204ENST00000391814 LNP1A1A4G5 178 aa14.37□□□□□ -0.11
SHANK1-204ENST00000391814 PAGE4O60829 102 aa14.37□□□□□ -0.11
SHANK1-204ENST00000391814 MPZL1O95297 269 aa14.37□□□□□ -0.11
SHANK1-204ENST00000391814 TMIGD3P0DMS9 266 aaPredicted RBP14.37□□□□□ -0.11
SHANK1-204ENST00000391814 TAS2R60P59551 318 aa14.37□□□□□ -0.11
SHANK1-204ENST00000391814 C8orf82Q6P1X6 216 aaPredicted RBP14.37□□□□□ -0.11
SHANK1-204ENST00000391814 SSX8Q7RTT4 187 aa14.37□□□□□ -0.11
SHANK1-204ENST00000391814 OR2T6Q8NHC8 308 aa14.37□□□□□ -0.11
SHANK1-204ENST00000391814 SLC37A2Q8TED4 501 aa14.37□□□□□ -0.11
SHANK1-204ENST00000391814 AAMDCQ9H7C9 122 aa14.37□□□□□ -0.11
SHANK1-204ENST00000391814 HES4Q9HCC6 221 aa14.37□□□□□ -0.11
SHANK1-204ENST00000391814 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.37□□□□□ -0.11
SHANK1-204ENST00000391814 CBLN4Q9NTU7 201 aa14.37□□□□□ -0.11
SHANK1-204ENST00000391814 GAGE10A6NGK3 116 aa14.37□□□□□ -0.11
SHANK1-204ENST00000391814 NPY1RP25929 384 aa14.37□□□□□ -0.11
SHANK1-204ENST00000391814 FKBP2P26885 142 aaKnown RBP14.37□□□□□ -0.11
SHANK1-204ENST00000391814 EXT1Q16394 746 aa14.37□□□□□ -0.11
SHANK1-204ENST00000391814 LIAT1Q6ZQX7 453 aa14.37□□□□□ -0.11
SHANK1-204ENST00000391814 HSPB9Q9BQS6 159 aa14.37□□□□□ -0.11
SHANK1-204ENST00000391814 GGACTQ9BVM4 153 aa14.37□□□□□ -0.11
SHANK1-204ENST00000391814 CSNK1EP49674 416 aaKnown RBP14.37□□□□□ -0.11
SHANK1-204ENST00000391814 TMEM116Q8NCL8 245 aa14.37□□□□□ -0.11
SHANK1-204ENST00000391814 OR1P1Q8NH06 330 aa14.37□□□□□ -0.11
SHANK1-204ENST00000391814 GCGP01275 180 aa14.37□□□□□ -0.11
SHANK1-204ENST00000391814 NMBP08949 121 aa14.37□□□□□ -0.11
SHANK1-204ENST00000391814 GAMTQ14353 236 aa14.37□□□□□ -0.11
SHANK1-204ENST00000391814 KIAA0040Q15053 153 aa14.37□□□□□ -0.11
SHANK1-204ENST00000391814 MRPL43Q8N983 215 aaKnown RBP14.37□□□□□ -0.11
SHANK1-204ENST00000391814 OR2D2Q9H210 308 aa14.37□□□□□ -0.11
SHANK1-204ENST00000391814 M0R1B8 84 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 PRSS23O95084 383 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 VSIG10L2P0DP72 767 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 THSD4Q6ZMP0 1018 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 FRRS1LQ9P0K9 344 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 GON4LQ3T8J9 2241 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 CDC42EP2O14613 210 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 CTSDP07339 412 aaPredicted RBP14.36□□□□□ -0.11
SHANK1-204ENST00000391814 CYB561P49447 251 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 EIF4E3Q8N5X7 224 aaKnown RBP14.36□□□□□ -0.11
SHANK1-204ENST00000391814 FAM117AQ9C073 453 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 DEFB127Q9H1M4 99 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 FGF22Q9HCT0 170 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 TMEM30CPA0ZSE6 113 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 HMGA2P52926 109 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 C8orf44Q96CB5 159 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 GAL3ST2Q9H3Q3 398 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 ZNF275Q9NSD4 429 aaPredicted RBP14.36□□□□□ -0.11
SHANK1-204ENST00000391814 THAP10Q9P2Z0 257 aaPredicted RBP14.36□□□□□ -0.11
SHANK1-204ENST00000391814 ADAM11O75078 769 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 CXCL12P48061 93 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 CLDN15P56746 228 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 OR52L2PQ8NGH6 319 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 TMEM204Q9BSN7 226 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 MRM2Q9UI43 246 aaKnown RBP14.36□□□□□ -0.11
SHANK1-204ENST00000391814 ATP23Q9Y6H3 246 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 EPPINO95925 133 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 OR5A2Q8NGI9 324 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 PP6455Q8WZ26 134 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 TMEM140Q9NV12 185 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 ECM29Q5VYK3 1845 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 OGG1O15527 345 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 OR1C1Q15619 314 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 OR2M3Q8NG83 312 aa14.36□□□□□ -0.11
SHANK1-204ENST00000391814 DNAJB12Q9NXW2 375 aaKnown RBP14.36□□□□□ -0.11
SHANK1-204ENST00000391814 CACNA1SQ13698 1873 aa14.35□□□□□ -0.11
SHANK1-204ENST00000391814 DEDDO75618 318 aa14.35□□□□□ -0.11
SHANK1-204ENST00000391814 NT5CQ8TCD5 201 aa14.35□□□□□ -0.11
SHANK1-204ENST00000391814 HES7Q9BYE0 225 aa14.35□□□□□ -0.11
SHANK1-204ENST00000391814 RCC2Q9P258 522 aaKnown RBP14.35□□□□□ -0.11
SHANK1-204ENST00000391814 MEX3AA1L020 520 aaKnown RBP14.35□□□□□ -0.11
SHANK1-204ENST00000391814 SOCS1O15524 211 aa14.35□□□□□ -0.11
SHANK1-204ENST00000391814 AMER3Q8N944 861 aa14.35□□□□□ -0.11
SHANK1-204ENST00000391814 MRGPRX4Q96LA9 322 aa14.35□□□□□ -0.11
SHANK1-204ENST00000391814 REC114Q7Z4M0 266 aa14.35□□□□□ -0.11
SHANK1-204ENST00000391814 CARFQ8N187 725 aa14.35□□□□□ -0.11
SHANK1-204ENST00000391814 MORN4Q8NDC4 146 aa14.35□□□□□ -0.11
SHANK1-204ENST00000391814 SH2D2AQ9NP31 389 aa14.35□□□□□ -0.11
SHANK1-204ENST00000391814 MMP25Q9NPA2 562 aa14.35□□□□□ -0.11
SHANK1-204ENST00000391814 OR6C3Q9NZP0 311 aa14.35□□□□□ -0.11
SHANK1-204ENST00000391814 IGHV3-43A0A0B4J1X8 118 aa14.35□□□□□ -0.11
SHANK1-204ENST00000391814 VAMP5O95183 116 aa14.35□□□□□ -0.11
SHANK1-204ENST00000391814 CFDP00746 253 aaPredicted RBP14.35□□□□□ -0.11
SHANK1-204ENST00000391814 IGHV3-43DP0DP04 118 aa14.35□□□□□ -0.11
SHANK1-204ENST00000391814 RPS4Y1P22090 263 aaKnown RBP14.35□□□□□ -0.11
SHANK1-204ENST00000391814 DPTQ07507 201 aa14.35□□□□□ -0.11
SHANK1-204ENST00000391814 OR1F12Q8NHA8 337 aa14.35□□□□□ -0.11
SHANK1-204ENST00000391814 CACFD1Q9UGQ2 172 aa14.35□□□□□ -0.11
SHANK1-204ENST00000391814 CYB561D1Q8N8Q1 229 aa14.35□□□□□ -0.11
SHANK1-204ENST00000391814 CCL4L1Q8NHW4 92 aa14.35□□□□□ -0.11
SHANK1-204ENST00000391814 MOB3AQ96BX8 217 aa14.35□□□□□ -0.11
SHANK1-204ENST00000391814 RER1O15258 196 aa14.34□□□□□ -0.11
SHANK1-204ENST00000391814 PDE6DO43924 150 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms