RNA–Protein interactions for RNA: ENST00000390971.1

SNORA40.4-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.4-201ENST00000390971 ZNF404Q494X3 552 aa1.85□□□□□ -2.11
SNORA40.4-201ENST00000390971 EPGNQ6UW88 154 aa1.85□□□□□ -2.11
SNORA40.4-201ENST00000390971 HS3ST5Q8IZT8 346 aa1.85□□□□□ -2.11
SNORA40.4-201ENST00000390971 COA1Q9GZY4 146 aa1.85□□□□□ -2.11
SNORA40.4-201ENST00000390971 LRRC19Q9H756 370 aa1.85□□□□□ -2.11
SNORA40.4-201ENST00000390971 ICE1Q9Y2F5 2266 aa1.84□□□□□ -2.11
SNORA40.4-201ENST00000390971 NOS1P29475 1434 aa1.84□□□□□ -2.11
SNORA40.4-201ENST00000390971 FCGBPQ9Y6R7 5405 aaPredicted RBP1.84□□□□□ -2.11
SNORA40.4-201ENST00000390971 MYO9BQ13459 2157 aa1.84□□□□□ -2.11
SNORA40.4-201ENST00000390971 IGKV1D-37A0A075B6S9 117 aa1.84□□□□□ -2.11
SNORA40.4-201ENST00000390971 TRAPPC6AO75865 159 aa1.84□□□□□ -2.11
SNORA40.4-201ENST00000390971 PSMD4P55036 377 aaKnown RBP1.84□□□□□ -2.11
SNORA40.4-201ENST00000390971 UBE2NLQ5JXB2 153 aa1.84□□□□□ -2.11
SNORA40.4-201ENST00000390971 IDNKQ5T6J7 187 aa1.84□□□□□ -2.11
SNORA40.4-201ENST00000390971 FAM27D1Q5T7N8 215 aa1.84□□□□□ -2.11
SNORA40.4-201ENST00000390971 ZNF773Q6PK81 442 aa1.84□□□□□ -2.11
SNORA40.4-201ENST00000390971 SLC35D2Q76EJ3 337 aa1.84□□□□□ -2.11
SNORA40.4-201ENST00000390971 MSRB3Q8IXL7 192 aa1.84□□□□□ -2.11
SNORA40.4-201ENST00000390971 FGF4P08620 206 aa1.83□□□□□ -2.12
SNORA40.4-201ENST00000390971 ZNF22P17026 224 aaPredicted RBP1.83□□□□□ -2.12
SNORA40.4-201ENST00000390971 TAC1P20366 129 aa1.83□□□□□ -2.12
SNORA40.4-201ENST00000390971 CSKP41240 450 aa1.83□□□□□ -2.12
SNORA40.4-201ENST00000390971 TAS2R60P59551 318 aa1.83□□□□□ -2.12
SNORA40.4-201ENST00000390971 SLC35B1P78383 322 aa1.83□□□□□ -2.12
SNORA40.4-201ENST00000390971 CLEC12AQ5QGZ9 265 aa1.83□□□□□ -2.12
SNORA40.4-201ENST00000390971 SYT6Q5T7P8 510 aaPredicted RBP1.83□□□□□ -2.12
SNORA40.4-201ENST00000390971 DNAAF3Q8N9W5 541 aa1.83□□□□□ -2.12
SNORA40.4-201ENST00000390971 PROKR2Q8NFJ6 384 aa1.83□□□□□ -2.12
SNORA40.4-201ENST00000390971 QKIQ96PU8 341 aaKnown RBP eCLIP1.83□□□□□ -2.12
SNORA40.4-201ENST00000390971 C20orf144Q9BQM9 153 aa1.83□□□□□ -2.12
SNORA40.4-201ENST00000390971 KIR3DX1Q9H7L2 352 aa1.83□□□□□ -2.12
SNORA40.4-201ENST00000390971 ZMAT5Q9UDW3 170 aaKnown RBP1.83□□□□□ -2.12
SNORA40.4-201ENST00000390971 U3KQK5 164 aa1.83□□□□□ -2.12
SNORA40.4-201ENST00000390971 A0A0J9YYE9 177 aa1.82□□□□□ -2.12
SNORA40.4-201ENST00000390971 OR2AT4A6NND4 320 aa1.82□□□□□ -2.12
SNORA40.4-201ENST00000390971 TRBC1P01850 177 aa1.82□□□□□ -2.12
SNORA40.4-201ENST00000390971 CGB3P0DN86 165 aa1.82□□□□□ -2.12
SNORA40.4-201ENST00000390971 CGB7P0DN87 165 aa1.82□□□□□ -2.12
SNORA40.4-201ENST00000390971 GTF2F2P13984 249 aa1.82□□□□□ -2.12
SNORA40.4-201ENST00000390971 CTLA4P16410 223 aa1.82□□□□□ -2.12
SNORA40.4-201ENST00000390971 MSR1P21757 451 aa1.82□□□□□ -2.12
SNORA40.4-201ENST00000390971 PYCR3Q53H96 274 aa1.82□□□□□ -2.12
SNORA40.4-201ENST00000390971 SETD3Q86TU7 594 aaPredicted RBP1.82□□□□□ -2.12
SNORA40.4-201ENST00000390971 CERS2Q96G23 380 aa1.82□□□□□ -2.12
SNORA40.4-201ENST00000390971 ANP32EQ9BTT0 268 aa1.82□□□□□ -2.12
SNORA40.4-201ENST00000390971 SDHAF3Q9NRP4 125 aa1.82□□□□□ -2.12
SNORA40.4-201ENST00000390971 FLVCR2Q9UPI3 526 aa1.82□□□□□ -2.12
SNORA40.4-201ENST00000390971 DOCK6Q96HP0 2047 aa1.82□□□□□ -2.12
SNORA40.4-201ENST00000390971 HELZ2Q9BYK8 2649 aaKnown RBP1.82□□□□□ -2.12
SNORA40.4-201ENST00000390971 TRIM64CA6NLI5 447 aa1.81□□□□□ -2.12
SNORA40.4-201ENST00000390971 CD300LBA8K4G0 201 aa1.81□□□□□ -2.12
SNORA40.4-201ENST00000390971 UPK2O00526 184 aa1.81□□□□□ -2.12
SNORA40.4-201ENST00000390971 CRTAPO75718 401 aaPredicted RBP1.81□□□□□ -2.12
SNORA40.4-201ENST00000390971 S1PR2O95136 353 aa1.81□□□□□ -2.12
SNORA40.4-201ENST00000390971 PLEKHA8P1O95397 391 aa1.81□□□□□ -2.12
SNORA40.4-201ENST00000390971 PDYNP01213 254 aa1.81□□□□□ -2.12
SNORA40.4-201ENST00000390971 ZNF83P51522 516 aa1.81□□□□□ -2.12
SNORA40.4-201ENST00000390971 TMEM215Q68D42 235 aa1.81□□□□□ -2.12
SNORA40.4-201ENST00000390971 UGT2A3Q6UWM9 527 aa1.81□□□□□ -2.12
SNORA40.4-201ENST00000390971 DPPA2Q7Z7J5 298 aa1.81□□□□□ -2.12
SNORA40.4-201ENST00000390971 TMEM25Q86YD3 366 aa1.81□□□□□ -2.12
SNORA40.4-201ENST00000390971 BBOF1Q8ND07 529 aa1.81□□□□□ -2.12
SNORA40.4-201ENST00000390971 OR51A7Q8NH64 312 aa1.81□□□□□ -2.12
SNORA40.4-201ENST00000390971 TCP10LQ8TDR4 215 aa1.81□□□□□ -2.12
SNORA40.4-201ENST00000390971 LMX1AQ8TE12 382 aa1.81□□□□□ -2.12
SNORA40.4-201ENST00000390971 C22orf15Q8WYQ4 148 aa1.81□□□□□ -2.12
SNORA40.4-201ENST00000390971 PORCNQ9H237 461 aa1.81□□□□□ -2.12
SNORA40.4-201ENST00000390971 A6NED7 52 aa1.8□□□□□ -2.12
SNORA40.4-201ENST00000390971 GYG2O15488 501 aa1.8□□□□□ -2.12
SNORA40.4-201ENST00000390971 GATCO43716 136 aaKnown RBP1.8□□□□□ -2.12
SNORA40.4-201ENST00000390971 RLN2P04090 185 aa1.8□□□□□ -2.12
SNORA40.4-201ENST00000390971 CD9P21926 228 aa1.8□□□□□ -2.12
SNORA40.4-201ENST00000390971 IVDP26440 423 aa1.8□□□□□ -2.12
SNORA40.4-201ENST00000390971 ATP6V1FQ16864 119 aa1.8□□□□□ -2.12
SNORA40.4-201ENST00000390971 NELFCDQ8IXH7 590 aa1.8□□□□□ -2.12
SNORA40.4-201ENST00000390971 OR2V1Q8NHB1 315 aa1.8□□□□□ -2.12
SNORA40.4-201ENST00000390971 RNASE11Q8TAA1 199 aaKnown RBP1.8□□□□□ -2.12
SNORA40.4-201ENST00000390971 NDNFQ8TB73 568 aa1.8□□□□□ -2.12
SNORA40.4-201ENST00000390971 SLC38A1Q9H2H9 487 aa1.8□□□□□ -2.12
SNORA40.4-201ENST00000390971 ZNF286AQ9HBT8 521 aa1.8□□□□□ -2.12
SNORA40.4-201ENST00000390971 C12orf4Q9NQ89 552 aa1.8□□□□□ -2.12
SNORA40.4-201ENST00000390971 OR5V1Q9UGF6 321 aa1.8□□□□□ -2.12
SNORA40.4-201ENST00000390971 C14orf166Q9Y224 244 aaKnown RBP1.8□□□□□ -2.12
SNORA40.4-201ENST00000390971 AP3M1Q9Y2T2 418 aa1.8□□□□□ -2.12
SNORA40.4-201ENST00000390971 NUP205Q92621 2012 aa1.79□□□□□ -2.12
SNORA40.4-201ENST00000390971 TRBV24-1A0A075B6N3 115 aa1.79□□□□□ -2.12
SNORA40.4-201ENST00000390971 SOD3P08294 240 aa1.79□□□□□ -2.12
SNORA40.4-201ENST00000390971 ARL14EPLP0DKL9 152 aa1.79□□□□□ -2.12
SNORA40.4-201ENST00000390971 SCGB1C2P0DMR2 95 aa1.79□□□□□ -2.12
SNORA40.4-201ENST00000390971 CNTFRP26992 372 aa1.79□□□□□ -2.12
SNORA40.4-201ENST00000390971 HTR2CP28335 458 aa1.79□□□□□ -2.12
SNORA40.4-201ENST00000390971 PSMC5P62195 406 aa1.79□□□□□ -2.12
SNORA40.4-201ENST00000390971 RPL31P62899 125 aaKnown RBP1.79□□□□□ -2.12
SNORA40.4-201ENST00000390971 GPR176Q14439 515 aa1.79□□□□□ -2.12
SNORA40.4-201ENST00000390971 SCGB1C1Q8TD33 95 aa1.79□□□□□ -2.12
SNORA40.4-201ENST00000390971 TFGQ92734 400 aaPredicted RBP1.79□□□□□ -2.12
SNORA40.4-201ENST00000390971 SHCBP1LQ9BZQ2 653 aa1.79□□□□□ -2.12
SNORA40.4-201ENST00000390971 WDR55Q9H6Y2 383 aaPredicted RBP1.79□□□□□ -2.12
SNORA40.4-201ENST00000390971 PLEKHA1Q9HB21 404 aa1.79□□□□□ -2.12
SNORA40.4-201ENST00000390971 SLC5A10A0PJK1 596 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms