RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 TMEM185AQ8NFB2 350 aa13.41□□□□□ -0.26
SNRPB-201ENST00000381342 OR4M2Q8NGB6 313 aa13.41□□□□□ -0.26
SNRPB-201ENST00000381342 OR10K1Q8NGX5 313 aa13.41□□□□□ -0.26
SNRPB-201ENST00000381342 ELL3Q9HB65 397 aaPredicted RBP13.41□□□□□ -0.26
SNRPB-201ENST00000381342 POLR3KQ9Y2Y1 108 aaPredicted RBP13.41□□□□□ -0.26
SNRPB-201ENST00000381342 WNK2Q9Y3S1 2297 aa13.41□□□□□ -0.26
SNRPB-201ENST00000381342 A0A087WXM4 84 aa13.4□□□□□ -0.26
SNRPB-201ENST00000381342 IGHV2-70DA0A0C4DH43 119 aa13.4□□□□□ -0.26
SNRPB-201ENST00000381342 NDUFB3O43676 98 aa13.4□□□□□ -0.26
SNRPB-201ENST00000381342 TCF21O43680 179 aa13.4□□□□□ -0.26
SNRPB-201ENST00000381342 DUSP1P28562 367 aa13.4□□□□□ -0.26
SNRPB-201ENST00000381342 PRDX2P32119 198 aa13.4□□□□□ -0.26
SNRPB-201ENST00000381342 PTGFRP43088 359 aa13.4□□□□□ -0.26
SNRPB-201ENST00000381342 PAX2Q02962 417 aa13.4□□□□□ -0.26
SNRPB-201ENST00000381342 LRRTM1Q86UE6 522 aa13.4□□□□□ -0.26
SNRPB-201ENST00000381342 NKAIN3Q8N8D7 197 aa13.4□□□□□ -0.26
SNRPB-201ENST00000381342 PXT1Q8NFP0 134 aa13.4□□□□□ -0.26
SNRPB-201ENST00000381342 MUL1Q969V5 352 aa13.4□□□□□ -0.26
SNRPB-201ENST00000381342 SDSLQ96GA7 329 aa13.4□□□□□ -0.26
SNRPB-201ENST00000381342 MED30Q96HR3 178 aa13.4□□□□□ -0.26
SNRPB-201ENST00000381342 OCEL1Q9H607 264 aa13.4□□□□□ -0.26
SNRPB-201ENST00000381342 HMG20AQ9NP66 347 aa13.4□□□□□ -0.26
SNRPB-201ENST00000381342 SLC25A10Q9UBX3 287 aaPredicted RBP13.4□□□□□ -0.26
SNRPB-201ENST00000381342 MAB21L2Q9Y586 359 aa13.4□□□□□ -0.26
SNRPB-201ENST00000381342 LOC105371242A0A075B767 164 aa13.39□□□□□ -0.27
SNRPB-201ENST00000381342 J3QLI3 93 aa13.39□□□□□ -0.27
SNRPB-201ENST00000381342 ARL6IP5O75915 188 aa13.39□□□□□ -0.27
SNRPB-201ENST00000381342 CDRT1O95170 752 aa13.39□□□□□ -0.27
SNRPB-201ENST00000381342 GATA3P23771 443 aa13.39□□□□□ -0.27
SNRPB-201ENST00000381342 CALRP27797 417 aaKnown RBP13.39□□□□□ -0.27
SNRPB-201ENST00000381342 CAPZA1P52907 286 aa13.39□□□□□ -0.27
SNRPB-201ENST00000381342 RSU1Q15404 277 aa13.39□□□□□ -0.27
SNRPB-201ENST00000381342 LRRC10Q5BKY1 277 aa13.39□□□□□ -0.27
SNRPB-201ENST00000381342 SYT6Q5T7P8 510 aaPredicted RBP13.39□□□□□ -0.27
SNRPB-201ENST00000381342 CD200R1LQ6Q8B3 271 aa13.39□□□□□ -0.27
SNRPB-201ENST00000381342 FIP1L1Q6UN15 594 aaKnown RBP13.39□□□□□ -0.27
SNRPB-201ENST00000381342 BTN2A1Q7KYR7 527 aa13.39□□□□□ -0.27
SNRPB-201ENST00000381342 H1FXQ92522 213 aaKnown RBP13.39□□□□□ -0.27
SNRPB-201ENST00000381342 PHYHIPQ92561 330 aa13.39□□□□□ -0.27
SNRPB-201ENST00000381342 DACT3Q96B18 629 aaPredicted RBP13.39□□□□□ -0.27
SNRPB-201ENST00000381342 TMPRSS13Q9BYE2 586 aa13.39□□□□□ -0.27
SNRPB-201ENST00000381342 CNTD2Q9H8S5 307 aa13.39□□□□□ -0.27
SNRPB-201ENST00000381342 ING4Q9UNL4 249 aa13.39□□□□□ -0.27
SNRPB-201ENST00000381342 GSTK1Q9Y2Q3 226 aa13.39□□□□□ -0.27
SNRPB-201ENST00000381342 MRPS28Q9Y2Q9 187 aaKnown RBP13.39□□□□□ -0.27
SNRPB-201ENST00000381342 SVEP1Q4LDE5 3571 aa13.39□□□□□ -0.27
SNRPB-201ENST00000381342 PPIAL4CA0A0B4J2A2 164 aa13.38□□□□□ -0.27
SNRPB-201ENST00000381342 HAND1O96004 215 aa13.38□□□□□ -0.27
SNRPB-201ENST00000381342 NDUFB7P17568 137 aa13.38□□□□□ -0.27
SNRPB-201ENST00000381342 SRMP19623 302 aa13.38□□□□□ -0.27
SNRPB-201ENST00000381342 COL10A1Q03692 680 aa13.38□□□□□ -0.27
SNRPB-201ENST00000381342 SPIN3Q5JUX0 258 aa13.38□□□□□ -0.27
SNRPB-201ENST00000381342 LYPD6Q86Y78 171 aa13.38□□□□□ -0.27
SNRPB-201ENST00000381342 ZNF561Q8N587 486 aa13.38□□□□□ -0.27
SNRPB-201ENST00000381342 ASCC1Q8N9N2 400 aaKnown RBP13.38□□□□□ -0.27
SNRPB-201ENST00000381342 OR4D6Q8NGJ1 314 aa13.38□□□□□ -0.27
SNRPB-201ENST00000381342 NUDT16L1Q9BRJ7 211 aaKnown RBP13.38□□□□□ -0.27
SNRPB-201ENST00000381342 SLITRK2Q9H156 845 aa13.38□□□□□ -0.27
SNRPB-201ENST00000381342 RHOFQ9HBH0 211 aa13.38□□□□□ -0.27
SNRPB-201ENST00000381342 INSIG2Q9Y5U4 225 aa13.38□□□□□ -0.27
SNRPB-201ENST00000381342 ENSAO43768 121 aaKnown RBP13.37□□□□□ -0.27
SNRPB-201ENST00000381342 HTR3BO95264 441 aa13.37□□□□□ -0.27
SNRPB-201ENST00000381342 AVPP01185 164 aa13.37□□□□□ -0.27
SNRPB-201ENST00000381342 SMIM18P0DKX4 95 aa13.37□□□□□ -0.27
SNRPB-201ENST00000381342 SERPINA2P20848 420 aa13.37□□□□□ -0.27
SNRPB-201ENST00000381342 MTNR1BP49286 362 aa13.37□□□□□ -0.27
SNRPB-201ENST00000381342 CAV3P56539 151 aa13.37□□□□□ -0.27
SNRPB-201ENST00000381342 FGF12P61328 243 aa13.37□□□□□ -0.27
SNRPB-201ENST00000381342 ZNF146Q15072 292 aa13.37□□□□□ -0.27
SNRPB-201ENST00000381342 CD276Q5ZPR3 534 aa13.37□□□□□ -0.27
SNRPB-201ENST00000381342 AWAT2Q6E213 333 aa13.37□□□□□ -0.27
SNRPB-201ENST00000381342 C22orf42Q6IC83 251 aa13.37□□□□□ -0.27
SNRPB-201ENST00000381342 ASCL4Q6XD76 172 aa13.37□□□□□ -0.27
SNRPB-201ENST00000381342 RAB40AQ8WXH6 277 aa13.37□□□□□ -0.27
SNRPB-201ENST00000381342 S100A13Q99584 98 aa13.37□□□□□ -0.27
SNRPB-201ENST00000381342 GFI1Q99684 422 aa13.37□□□□□ -0.27
SNRPB-201ENST00000381342 METTL9Q9H1A3 318 aa13.37□□□□□ -0.27
SNRPB-201ENST00000381342 VCX3AQ9NNX9 186 aa13.37□□□□□ -0.27
SNRPB-201ENST00000381342 EXOSC4Q9NPD3 245 aaKnown RBP13.37□□□□□ -0.27
SNRPB-201ENST00000381342 IL36GQ9NZH8 169 aa13.37□□□□□ -0.27
SNRPB-201ENST00000381342 RPUSD1Q9UJJ7 312 aaKnown RBP13.37□□□□□ -0.27
SNRPB-201ENST00000381342 TRDV1A0A1B0GX56 115 aa13.36□□□□□ -0.27
SNRPB-201ENST00000381342 A0A1W2PP11 408 aa13.36□□□□□ -0.27
SNRPB-201ENST00000381342 MEGF11A6BM72 1044 aa13.36□□□□□ -0.27
SNRPB-201ENST00000381342 TRIM64CA6NLI5 447 aa13.36□□□□□ -0.27
SNRPB-201ENST00000381342 SIRPB1O00241 398 aa13.36□□□□□ -0.27
SNRPB-201ENST00000381342 PDCD1Q15116 288 aa13.36□□□□□ -0.27
SNRPB-201ENST00000381342 PIGYQ3MUY2 71 aa13.36□□□□□ -0.27
SNRPB-201ENST00000381342 SLC22A6Q4U2R8 563 aa13.36□□□□□ -0.27
SNRPB-201ENST00000381342 ELP2Q6IA86 826 aa13.36□□□□□ -0.27
SNRPB-201ENST00000381342 GLIPR1L1Q6UWM5 242 aa13.36□□□□□ -0.27
SNRPB-201ENST00000381342 BTNL3Q6UXE8 466 aa13.36□□□□□ -0.27
SNRPB-201ENST00000381342 C1orf229Q6ZS94 237 aaPredicted RBP13.36□□□□□ -0.27
SNRPB-201ENST00000381342 CDH26Q8IXH8 852 aa13.36□□□□□ -0.27
SNRPB-201ENST00000381342 NANPQ8TBE9 248 aa13.36□□□□□ -0.27
SNRPB-201ENST00000381342 ZNF418Q8TF45 676 aaPredicted RBP13.36□□□□□ -0.27
SNRPB-201ENST00000381342 UQCC2Q9BRT2 126 aa13.36□□□□□ -0.27
SNRPB-201ENST00000381342 DCTN5Q9BTE1 182 aa13.36□□□□□ -0.27
SNRPB-201ENST00000381342 MRI1Q9BV20 369 aa13.36□□□□□ -0.27
SNRPB-201ENST00000381342 CHST6Q9GZX3 395 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms