RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 YTHDF2Q9Y5A9 579 aaKnown RBP10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 IGHV3OR16-10A0A075B7F0 116 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 IGKV3D-15A0A087WSY6 115 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 IGKV3-15P01624 115 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 HOXC8P31273 242 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 RPL29P47914 159 aaKnown RBP10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 RNF165Q6ZSG1 346 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 OR4D11Q8NGI4 311 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 RGP1Q92546 391 aaPredicted RBP10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 FOXB1Q99853 325 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 ZNF426Q9BUY5 554 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 ZMAT5Q9UDW3 170 aaKnown RBP10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 PCOLCE2Q9UKZ9 415 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 MRPS18BQ9Y676 258 aaKnown RBP10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 CLDN34H7C241 214 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 GYPAP02724 150 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 CCL4P13236 92 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 PTGFRP43088 359 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 TFPI2P48307 235 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 SUMO3P55854 103 aaPredicted RBP10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 CD300LDQ6UXZ3 194 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 LIMS2Q7Z4I7 341 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 ABI3BPQ7Z7G0 1075 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 TGIF2LYQ8IUE0 185 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 C4orf45Q96LM5 186 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 NRTNQ99748 197 aa10.65□□□□□ -0.7
PCDHA9-201ENST00000378122 PAPPAQ13219 1627 aa10.65□□□□□ -0.71
PCDHA9-201ENST00000378122 EPPINO95925 133 aa10.65□□□□□ -0.71
PCDHA9-201ENST00000378122 CEBPEQ15744 281 aa10.65□□□□□ -0.71
PCDHA9-201ENST00000378122 ZNF683Q8IZ20 524 aa10.65□□□□□ -0.71
PCDHA9-201ENST00000378122 CHRDL1Q9BU40 450 aa10.65□□□□□ -0.71
PCDHA9-201ENST00000378122 ADAT1Q9BUB4 502 aaKnown RBP10.65□□□□□ -0.71
PCDHA9-201ENST00000378122 IGLV3-16A0A075B6K0 115 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 LINC00862A6NCI5 91 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 CTDSPLO15194 276 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 NKX2-2O95096 273 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 KRASP01116 189 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 CYC1P08574 325 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 TUSC1Q2TAM9 212 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 TMEM215Q68D42 235 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 STUMQ69YW2 141 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 DYNLRB2Q8TF09 96 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 MCHR2Q969V1 340 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 MSL2Q9HCI7 577 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 NAT8BQ9UHF3 227 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 RAXQ9Y2V3 346 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 SCN2AQ99250 2005 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 DUS4LO95620 317 aaKnown RBP10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 CST2P09228 141 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 INHBBP09529 407 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 FUT3P21217 361 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 SLC38A11Q08AI6 406 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 PRDX4Q13162 271 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 FAM78BQ5VT40 261 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 MVB12AQ96EY5 273 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 STRCQ7RTU9 1775 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 LTBP4Q8N2S1 1624 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 LMO7DNF2Z398 122 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 SMIM17P0DL12 118 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 DYNLT3P51808 116 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 Q1RN00 199 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 NHLRC2Q8NBF2 726 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 PP6455Q8WZ26 134 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 NPAS1Q99742 590 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 NDFIP1Q9BT67 221 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 NAA60Q9H7X0 242 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 NTMQ9P121 344 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 COL18A1P39060 1754 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 A0A087X0M5 115 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 A0A1B0GX30 115 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 ALG1L2C9J202 215 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 CT62P0C5K7 136 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 DAOP14920 347 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 CHRNA7P36544 502 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 C21orf62-AS1Q17RA5 79 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 CCL19Q99731 98 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 PECRQ9BY49 303 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 TMEM218A2RU14 115 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 HSBP1O75506 76 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 CBR3O75828 277 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 HMGA2P52926 109 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 TMEM108Q6UXF1 575 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 CADM4Q8NFZ8 388 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 EID2BQ96D98 161 aa10.64□□□□□ -0.71
PCDHA9-201ENST00000378122 TMEM30CPA0ZSE6 113 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 RBFOX3A6NFN3 312 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 HPP00738 406 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 EPHA8P29322 1005 aaPredicted RBP10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 LPAR6P43657 344 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 C8orf82Q6P1X6 216 aaPredicted RBP10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 TMED3Q9Y3Q3 217 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 CTSVO60911 334 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 SSPNQ14714 243 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 FA2HQ7L5A8 372 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 PERPQ96FX8 193 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 ELOA3CA0A087WX78 387 aaPredicted RBP10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 MAP1LC3B2A6NCE7 125 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 DGAT2L6Q6ZPD8 337 aa10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 SPACA9Q96E40 222 aaPredicted RBP10.63□□□□□ -0.71
PCDHA9-201ENST00000378122 POM121L2Q96KW2 1035 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms