RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 UBE2J1Q9Y385 318 aaPredicted RBP11.27□□□□□ -0.61
PTCH1-202ENST00000375271 ARRDC5A6NEK1 342 aa11.26□□□□□ -0.61
PTCH1-202ENST00000375271 SH2D7A6NKC9 451 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-202ENST00000375271 DHRS7CA6NNS2 312 aa11.26□□□□□ -0.61
PTCH1-202ENST00000375271 MGST3O14880 152 aa11.26□□□□□ -0.61
PTCH1-202ENST00000375271 RAMP3O60896 148 aa11.26□□□□□ -0.61
PTCH1-202ENST00000375271 TTRP02766 147 aa11.26□□□□□ -0.61
PTCH1-202ENST00000375271 OCM2P0CE71 109 aa11.26□□□□□ -0.61
PTCH1-202ENST00000375271 OCMP0CE72 109 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-202ENST00000375271 FAM106CPP0CH98 169 aa11.26□□□□□ -0.61
PTCH1-202ENST00000375271 RAP2AP10114 183 aa11.26□□□□□ -0.61
PTCH1-202ENST00000375271 OSMP13725 252 aa11.26□□□□□ -0.61
PTCH1-202ENST00000375271 PRRX1P54821 245 aa11.26□□□□□ -0.61
PTCH1-202ENST00000375271 ROM1Q03395 351 aa11.26□□□□□ -0.61
PTCH1-202ENST00000375271 ZNF322Q6U7Q0 402 aaPredicted RBP11.26□□□□□ -0.61
PTCH1-202ENST00000375271 SLC25A26Q70HW3 274 aa11.26□□□□□ -0.61
PTCH1-202ENST00000375271 KLHL30-AS1Q8NEE0 82 aa11.26□□□□□ -0.61
PTCH1-202ENST00000375271 OR4P4Q8NGL7 312 aa11.26□□□□□ -0.61
PTCH1-202ENST00000375271 CHPT1Q8WUD6 406 aa11.26□□□□□ -0.61
PTCH1-202ENST00000375271 TFAP2CQ92754 450 aa11.26□□□□□ -0.61
PTCH1-202ENST00000375271 CADM1Q9BY67 442 aaKnown RBP11.26□□□□□ -0.61
PTCH1-202ENST00000375271 DNAJB9Q9UBS3 223 aa11.26□□□□□ -0.61
PTCH1-202ENST00000375271 MOB4Q9Y3A3 225 aa11.26□□□□□ -0.61
PTCH1-202ENST00000375271 SNX5Q9Y5X3 404 aa11.26□□□□□ -0.61
PTCH1-202ENST00000375271 R4GMQ9 66 aa11.26□□□□□ -0.61
PTCH1-202ENST00000375271 HSPE1-MOB4S4R3N1 261 aa11.26□□□□□ -0.61
PTCH1-202ENST00000375271 V9GYS6 101 aa11.26□□□□□ -0.61
PTCH1-202ENST00000375271 FAM172BPA6NC97 362 aa11.25□□□□□ -0.61
PTCH1-202ENST00000375271 ZNF670-ZNF695F2Z2N8 137 aa11.25□□□□□ -0.61
PTCH1-202ENST00000375271 C3orf84H3BNL1 204 aa11.25□□□□□ -0.61
PTCH1-202ENST00000375271 IGLV3-1P01715 115 aa11.25□□□□□ -0.61
PTCH1-202ENST00000375271 CDK2P24941 298 aa11.25□□□□□ -0.61
PTCH1-202ENST00000375271 MYCNOSP40205 109 aa11.25□□□□□ -0.61
PTCH1-202ENST00000375271 THBS3P49746 956 aa11.25□□□□□ -0.61
PTCH1-202ENST00000375271 FUT6P51993 359 aa11.25□□□□□ -0.61
PTCH1-202ENST00000375271 SNU13P55769 128 aaKnown RBP11.25□□□□□ -0.61
PTCH1-202ENST00000375271 CXCR4P61073 352 aa11.25□□□□□ -0.61
PTCH1-202ENST00000375271 ERVK11-1P61568 191 aa11.25□□□□□ -0.61
PTCH1-202ENST00000375271 RPL23AP62750 156 aaKnown RBP11.25□□□□□ -0.61
PTCH1-202ENST00000375271 BDH1Q02338 343 aa11.25□□□□□ -0.61
PTCH1-202ENST00000375271 HES1Q14469 280 aa11.25□□□□□ -0.61
PTCH1-202ENST00000375271 ODF4Q2M2E3 257 aa11.25□□□□□ -0.61
PTCH1-202ENST00000375271 PRAMEF5Q5TYX0 476 aa11.25□□□□□ -0.61
PTCH1-202ENST00000375271 TMEM42Q69YG0 159 aa11.25□□□□□ -0.61
PTCH1-202ENST00000375271 C8orf86Q6ZUL3 223 aa11.25□□□□□ -0.61
PTCH1-202ENST00000375271 OR4D6Q8NGJ1 314 aa11.25□□□□□ -0.61
PTCH1-202ENST00000375271 PCDHB16Q9NRJ7 776 aa11.25□□□□□ -0.61
PTCH1-202ENST00000375271 ZFP57Q9NU63 452 aa11.25□□□□□ -0.61
PTCH1-202ENST00000375271 TVP23BQ9NYZ1 205 aa11.25□□□□□ -0.61
PTCH1-202ENST00000375271 TMEM82A0PJX8 343 aa11.24□□□□□ -0.61
PTCH1-202ENST00000375271 SERPINE3A8MV23 424 aa11.24□□□□□ -0.61
PTCH1-202ENST00000375271 SYT7O43581 403 aa11.24□□□□□ -0.61
PTCH1-202ENST00000375271 DCTN3O75935 186 aa11.24□□□□□ -0.61
PTCH1-202ENST00000375271 IGHA1P01876 353 aa11.24□□□□□ -0.61
PTCH1-202ENST00000375271 PRKACAP17612 351 aa11.24□□□□□ -0.61
PTCH1-202ENST00000375271 OR3A4PP47883 348 aa11.24□□□□□ -0.61
PTCH1-202ENST00000375271 POU3F4P49335 361 aa11.24□□□□□ -0.61
PTCH1-202ENST00000375271 P2RX3P56373 397 aa11.24□□□□□ -0.61
PTCH1-202ENST00000375271 BNIP1Q12981 228 aa11.24□□□□□ -0.61
PTCH1-202ENST00000375271 C10orf99Q6UWK7 81 aa11.24□□□□□ -0.61
PTCH1-202ENST00000375271 TCF23Q7RTU1 214 aa11.24□□□□□ -0.61
PTCH1-202ENST00000375271 OR2W3Q7Z3T1 314 aa11.24□□□□□ -0.61
PTCH1-202ENST00000375271 ZNF329Q86UD4 541 aa11.24□□□□□ -0.61
PTCH1-202ENST00000375271 ELMOD2Q8IZ81 293 aa11.24□□□□□ -0.61
PTCH1-202ENST00000375271 ARHGAP24Q8N264 748 aa11.24□□□□□ -0.61
PTCH1-202ENST00000375271 OR14K1Q8NGZ2 314 aa11.24□□□□□ -0.61
PTCH1-202ENST00000375271 TOMM40LQ969M1 308 aa11.24□□□□□ -0.61
PTCH1-202ENST00000375271 RPEQ96AT9 228 aa11.24□□□□□ -0.61
PTCH1-202ENST00000375271 MNTQ99583 582 aa11.24□□□□□ -0.61
PTCH1-202ENST00000375271 MED4Q9NPJ6 270 aa11.24□□□□□ -0.61
PTCH1-202ENST00000375271 MTCH1Q9NZJ7 389 aa11.24□□□□□ -0.61
PTCH1-202ENST00000375271 AMMECR1Q9Y4X0 333 aaPredicted RBP11.24□□□□□ -0.61
PTCH1-202ENST00000375271 DSCAML1Q8TD84 2053 aa11.23□□□□□ -0.61
PTCH1-202ENST00000375271 TCRBV5S2A0A599 114 aa11.23□□□□□ -0.61
PTCH1-202ENST00000375271 H0YHG0 523 aa11.23□□□□□ -0.61
PTCH1-202ENST00000375271 H3BSH0 61 aa11.23□□□□□ -0.61
PTCH1-202ENST00000375271 SIRPB1O00241 398 aa11.23□□□□□ -0.61
PTCH1-202ENST00000375271 RPP14O95059 124 aaKnown RBP11.23□□□□□ -0.61
PTCH1-202ENST00000375271 ZFPL1O95159 310 aa11.23□□□□□ -0.61
PTCH1-202ENST00000375271 KRT8P05787 483 aa11.23□□□□□ -0.61
PTCH1-202ENST00000375271 ANXA8P13928 327 aa11.23□□□□□ -0.61
PTCH1-202ENST00000375271 SLC2A5P22732 501 aa11.23□□□□□ -0.61
PTCH1-202ENST00000375271 PTGFRP43088 359 aa11.23□□□□□ -0.61
PTCH1-202ENST00000375271 ATP1B3P54709 279 aa11.23□□□□□ -0.61
PTCH1-202ENST00000375271 CDC42P60953 191 aa11.23□□□□□ -0.61
PTCH1-202ENST00000375271 SPIN3Q5JUX0 258 aa11.23□□□□□ -0.61
PTCH1-202ENST00000375271 TPTE2P1Q5T6R2 138 aa11.23□□□□□ -0.61
PTCH1-202ENST00000375271 FOXRED2Q8IWF2 684 aa11.23□□□□□ -0.61
PTCH1-202ENST00000375271 SLC35F2Q8IXU6 374 aa11.23□□□□□ -0.61
PTCH1-202ENST00000375271 FAM58AQ8N1B3 248 aa11.23□□□□□ -0.61
PTCH1-202ENST00000375271 COMMD1Q8N668 190 aa11.23□□□□□ -0.61
PTCH1-202ENST00000375271 YIPF7Q8N8F6 280 aa11.23□□□□□ -0.61
PTCH1-202ENST00000375271 APOL4Q9BPW4 351 aa11.23□□□□□ -0.61
PTCH1-202ENST00000375271 EXOSC4Q9NPD3 245 aaKnown RBP11.23□□□□□ -0.61
PTCH1-202ENST00000375271 KRT84Q9NSB2 600 aa11.23□□□□□ -0.61
PTCH1-202ENST00000375271 COPS3Q9UNS2 423 aa11.23□□□□□ -0.61
PTCH1-202ENST00000375271 OOSP1A8MZH6 123 aa11.22□□□□□ -0.61
PTCH1-202ENST00000375271 SH2D1BO14796 132 aa11.22□□□□□ -0.61
PTCH1-202ENST00000375271 SNX3O60493 162 aa11.22□□□□□ -0.61
PTCH1-202ENST00000375271 NFYBP25208 207 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms