RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 FAM90A13PP0C7W8 464 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 FAM90A14PP0C7W9 464 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 FAM90A24PP0C7X0 464 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 GDF1P27539 372 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 EIF2S3P41091 472 aaKnown RBP12.08□□□□□ -0.48
HMGCL-203ENST00000374490 GLP1RP43220 463 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 UCP3P55916 312 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 BLOC1S1P78537 153 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 HGFACQ04756 655 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 Q0VFX4 171 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 PJVKQ0ZLH3 352 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 MALLQ13021 153 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 TAF9Q16594 264 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 ABCA11PQ4W5N1 156 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 DMRTC1Q5HYR2 192 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 WIPI1Q5MNZ9 446 aaPredicted RBP12.08□□□□□ -0.48
HMGCL-203ENST00000374490 TMEM200AQ86VY9 491 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 LRTM2Q8N967 370 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 AKR7LQ8NHP1 331 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 TMED6Q8WW62 240 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 SPSB4Q96A44 273 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 ALKBH3Q96Q83 286 aaPredicted RBP12.08□□□□□ -0.48
HMGCL-203ENST00000374490 FAAP24Q9BTP7 215 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 GPR87Q9BY21 358 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 NAA60Q9H7X0 242 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 PRR13Q9NZ81 148 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 ZNF629Q9UEG4 869 aaPredicted RBP12.08□□□□□ -0.48
HMGCL-203ENST00000374490 ACACAQ13085 2346 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 IGKV1-27A0A075B6S5 117 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 IGKV3D-15A0A087WSY6 115 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 TRIM77I1YAP6 450 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 K7EPK0 472 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 TOR1AO14656 332 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 PDCD6O75340 191 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 DEDDO75618 318 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 FAM157CP0CG43 387 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 HKR1P10072 659 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 ZNF708P17019 499 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 CTRB1P17538 263 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 FAM3AP98173 230 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 PDZK1IP1Q13113 114 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 RTP5Q14D33 572 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 C10orf91Q5T1B1 145 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 GGNBP1Q5YKI7 109 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 CTRB2Q6GPI1 263 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 TMEM211Q6ICI0 200 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 FAM71E2Q8N5Q1 922 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 CCDC71LQ8N9Z2 235 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 OR51F2Q8NH61 342 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 TSNAXQ99598 290 aaKnown RBP12.08□□□□□ -0.48
HMGCL-203ENST00000374490 SYT3Q9BQG1 590 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 PARPBPQ9NWS1 579 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 B4GALT7Q9UBV7 327 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 CARHSP1Q9Y2V2 147 aaKnown RBP12.08□□□□□ -0.48
HMGCL-203ENST00000374490 LAMA5O15230 3695 aa12.07□□□□□ -0.48
HMGCL-203ENST00000374490 ZNF705EA8MWA4 302 aaPredicted RBP12.07□□□□□ -0.48
HMGCL-203ENST00000374490 ABCD4O14678 606 aa12.07□□□□□ -0.48
HMGCL-203ENST00000374490 JTBO76095 146 aa12.07□□□□□ -0.48
HMGCL-203ENST00000374490 RPL12P30050 165 aaKnown RBP12.07□□□□□ -0.48
HMGCL-203ENST00000374490 GFRA1P56159 465 aa12.07□□□□□ -0.48
HMGCL-203ENST00000374490 PLCXD3Q63HM9 321 aa12.07□□□□□ -0.48
HMGCL-203ENST00000374490 ATRAIDQ6UW56 229 aa12.07□□□□□ -0.48
HMGCL-203ENST00000374490 SPAG16Q8N0X2 631 aa12.07□□□□□ -0.48
HMGCL-203ENST00000374490 CLRN3Q8NCR9 226 aa12.07□□□□□ -0.48
HMGCL-203ENST00000374490 SNIP1Q8TAD8 396 aaKnown RBP12.07□□□□□ -0.48
HMGCL-203ENST00000374490 SLC39A7Q92504 469 aa12.07□□□□□ -0.48
HMGCL-203ENST00000374490 SMIM8Q96KF7 97 aa12.07□□□□□ -0.48
HMGCL-203ENST00000374490 FAM173AQ9BQD7 235 aa12.07□□□□□ -0.48
HMGCL-203ENST00000374490 SULT4A1Q9BR01 284 aa12.07□□□□□ -0.48
HMGCL-203ENST00000374490 AIFM2Q9BRQ8 373 aa12.07□□□□□ -0.48
HMGCL-203ENST00000374490 HDHD3Q9BSH5 251 aaPredicted RBP12.07□□□□□ -0.48
HMGCL-203ENST00000374490 C1QTNF5Q9BXJ0 243 aa12.07□□□□□ -0.48
HMGCL-203ENST00000374490 TAF9BQ9HBM6 251 aa12.07□□□□□ -0.48
HMGCL-203ENST00000374490 ABI3Q9P2A4 366 aa12.07□□□□□ -0.48
HMGCL-203ENST00000374490 FBXO9Q9UK97 447 aaPredicted RBP12.07□□□□□ -0.48
HMGCL-203ENST00000374490 POMT1Q9Y6A1 747 aa12.07□□□□□ -0.48
HMGCL-203ENST00000374490 URB1O60287 2271 aaKnown RBP12.06□□□□□ -0.48
HMGCL-203ENST00000374490 CDK2AP1O14519 115 aa12.06□□□□□ -0.48
HMGCL-203ENST00000374490 KCNAB3O43448 404 aa12.06□□□□□ -0.48
HMGCL-203ENST00000374490 MMP7P09237 267 aaPredicted RBP12.06□□□□□ -0.48
HMGCL-203ENST00000374490 RFPL3SP0C7P2 107 aa12.06□□□□□ -0.48
HMGCL-203ENST00000374490 COX5BP10606 129 aa12.06□□□□□ -0.48
HMGCL-203ENST00000374490 NTF4P34130 210 aa12.06□□□□□ -0.48
HMGCL-203ENST00000374490 SULT1A2P50226 295 aa12.06□□□□□ -0.48
HMGCL-203ENST00000374490 PIGPP57054 158 aa12.06□□□□□ -0.48
HMGCL-203ENST00000374490 SRPXP78539 464 aa12.06□□□□□ -0.48
HMGCL-203ENST00000374490 ZNF169Q14929 603 aaPredicted RBP12.06□□□□□ -0.48
HMGCL-203ENST00000374490 SKA3Q8IX90 412 aa12.06□□□□□ -0.48
HMGCL-203ENST00000374490 SAXO1Q8IYX7 474 aa12.06□□□□□ -0.48
HMGCL-203ENST00000374490 FAM185AQ8N0U4 392 aa12.06□□□□□ -0.48
HMGCL-203ENST00000374490 LGI3Q8N145 548 aa12.06□□□□□ -0.48
HMGCL-203ENST00000374490 FBXL14Q8N1E6 418 aa12.06□□□□□ -0.48
HMGCL-203ENST00000374490 ZNF775Q96BV0 537 aaPredicted RBP12.06□□□□□ -0.48
HMGCL-203ENST00000374490 CYYR1Q96J86 154 aa12.06□□□□□ -0.48
HMGCL-203ENST00000374490 PRORYQ9H606 182 aa12.06□□□□□ -0.48
HMGCL-203ENST00000374490 ACKR4Q9NPB9 350 aa12.06□□□□□ -0.48
HMGCL-203ENST00000374490 P4HTMQ9NXG6 502 aa12.06□□□□□ -0.48
HMGCL-203ENST00000374490 E5RGE8 158 aa12.05□□□□□ -0.48
HMGCL-203ENST00000374490 H7C1Q1 480 aa12.05□□□□□ -0.48
HMGCL-203ENST00000374490 ATXN7O15265 892 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms