RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 RNASE10Q5GAN6 216 aaKnown RBP17.61■□□□□ 0.41
SYNC-201ENST00000373484 TMEM244Q5VVB8 128 aa17.61■□□□□ 0.41
SYNC-201ENST00000373484 MDP1Q86V88 176 aa17.61■□□□□ 0.41
SYNC-201ENST00000373484 PPP1R1CQ8WVI7 109 aa17.61■□□□□ 0.41
SYNC-201ENST00000373484 ZNF471Q9BX82 626 aaPredicted RBP17.61■□□□□ 0.41
SYNC-201ENST00000373484 WDR13Q9H1Z4 485 aa17.61■□□□□ 0.41
SYNC-201ENST00000373484 TMEM100Q9NV29 134 aa17.61■□□□□ 0.41
SYNC-201ENST00000373484 TMEM218A2RU14 115 aa17.61■□□□□ 0.41
SYNC-201ENST00000373484 MEIS3P1A6NDR6 274 aa17.61■□□□□ 0.41
SYNC-201ENST00000373484 H7C2Y5 167 aa17.61■□□□□ 0.41
SYNC-201ENST00000373484 PNPP00491 289 aa17.61■□□□□ 0.41
SYNC-201ENST00000373484 IGLV1-44P01699 117 aa17.61■□□□□ 0.41
SYNC-201ENST00000373484 CD3EP07766 207 aa17.61■□□□□ 0.41
SYNC-201ENST00000373484 CBR1P16152 277 aa17.61■□□□□ 0.41
SYNC-201ENST00000373484 CD40P25942 277 aa17.61■□□□□ 0.41
SYNC-201ENST00000373484 HOXA1P49639 335 aaPredicted RBP17.61■□□□□ 0.41
SYNC-201ENST00000373484 PRKXP51817 358 aa17.61■□□□□ 0.41
SYNC-201ENST00000373484 C17orf107Q6ZR85 190 aa17.61■□□□□ 0.41
SYNC-201ENST00000373484 PLPP7Q8NBV4 271 aa17.61■□□□□ 0.41
SYNC-201ENST00000373484 TMEM185AQ8NFB2 350 aa17.61■□□□□ 0.41
SYNC-201ENST00000373484 SLC6A7Q99884 636 aa17.61■□□□□ 0.41
SYNC-201ENST00000373484 MRPL22Q9NWU5 206 aaKnown RBP17.61■□□□□ 0.41
SYNC-201ENST00000373484 TAS2R4Q9NYW5 299 aa17.61■□□□□ 0.41
SYNC-201ENST00000373484 SLC22A13Q9Y226 551 aa17.61■□□□□ 0.41
SYNC-201ENST00000373484 CARHSP1Q9Y2V2 147 aaKnown RBP17.61■□□□□ 0.41
SYNC-201ENST00000373484 C9orf170A2RU37 121 aa17.6■□□□□ 0.41
SYNC-201ENST00000373484 M0QYG6 137 aa17.6■□□□□ 0.41
SYNC-201ENST00000373484 DUS4LO95620 317 aaKnown RBP17.6■□□□□ 0.41
SYNC-201ENST00000373484 CD79AP11912 226 aa17.6■□□□□ 0.41
SYNC-201ENST00000373484 ARR3P36575 388 aa17.6■□□□□ 0.41
SYNC-201ENST00000373484 ADAM8P78325 824 aa17.6■□□□□ 0.41
SYNC-201ENST00000373484 TAF13Q15543 124 aa17.6■□□□□ 0.41
SYNC-201ENST00000373484 PCK2Q16822 640 aa17.6■□□□□ 0.41
SYNC-201ENST00000373484 FGFBP3Q8TAT2 258 aa17.6■□□□□ 0.41
SYNC-201ENST00000373484 ABHD6Q9BV23 337 aa17.6■□□□□ 0.41
SYNC-201ENST00000373484 PLEKHF2Q9H8W4 249 aa17.6■□□□□ 0.41
SYNC-201ENST00000373484 SEC61A2Q9H9S3 476 aa17.6■□□□□ 0.41
SYNC-201ENST00000373484 RNF115Q9Y4L5 304 aa17.6■□□□□ 0.41
SYNC-201ENST00000373484 ROS1P08922 2347 aa17.6■□□□□ 0.41
SYNC-201ENST00000373484 IGHV1-18A0A0C4DH31 117 aa17.59■□□□□ 0.41
SYNC-201ENST00000373484 PLAUP00749 431 aa17.59■□□□□ 0.41
SYNC-201ENST00000373484 HLA-DQA2P01906 255 aa17.59■□□□□ 0.41
SYNC-201ENST00000373484 HSD11B1P28845 292 aa17.59■□□□□ 0.41
SYNC-201ENST00000373484 GUCA1AP43080 201 aaPredicted RBP17.59■□□□□ 0.41
SYNC-201ENST00000373484 CX3CR1P49238 355 aa17.59■□□□□ 0.41
SYNC-201ENST00000373484 GLO1Q04760 184 aa17.59■□□□□ 0.41
SYNC-201ENST00000373484 SGCAQ16586 387 aa17.59■□□□□ 0.41
SYNC-201ENST00000373484 ZNF260Q3ZCT1 412 aa17.59■□□□□ 0.41
SYNC-201ENST00000373484 FAM27BQ5VT28 67 aa17.59■□□□□ 0.41
SYNC-201ENST00000373484 DNM1P34Q6PK57 102 aa17.59■□□□□ 0.41
SYNC-201ENST00000373484 SLC16A14Q7RTX9 510 aa17.59■□□□□ 0.41
SYNC-201ENST00000373484 DPPA2Q7Z7J5 298 aa17.59■□□□□ 0.41
SYNC-201ENST00000373484 LRRC18Q8N456 261 aa17.59■□□□□ 0.41
SYNC-201ENST00000373484 SLC30A7Q8NEW0 376 aa17.59■□□□□ 0.41
SYNC-201ENST00000373484 ZNF75AQ96N20 296 aa17.59■□□□□ 0.41
SYNC-201ENST00000373484 UQCC2Q9BRT2 126 aa17.59■□□□□ 0.41
SYNC-201ENST00000373484 ZNF230Q9UIE0 474 aaPredicted RBP17.59■□□□□ 0.41
SYNC-201ENST00000373484 VSIG4Q9Y279 399 aa17.59■□□□□ 0.41
SYNC-201ENST00000373484 COA3Q9Y2R0 106 aaPredicted RBP17.59■□□□□ 0.41
SYNC-201ENST00000373484 TEX13DA0A0J9YY54 714 aaPredicted RBP17.58■□□□□ 0.41
SYNC-201ENST00000373484 NUPL2O15504 423 aaKnown RBP17.58■□□□□ 0.41
SYNC-201ENST00000373484 PATE4P0C8F1 98 aa17.58■□□□□ 0.41
SYNC-201ENST00000373484 LAP3P28838 519 aa17.58■□□□□ 0.41
SYNC-201ENST00000373484 RAB1AP62820 205 aa17.58■□□□□ 0.41
SYNC-201ENST00000373484 MICBQ29980 383 aa17.58■□□□□ 0.41
SYNC-201ENST00000373484 ELP2Q6IA86 826 aa17.58■□□□□ 0.41
SYNC-201ENST00000373484 LURAP1Q96LR2 239 aa17.58■□□□□ 0.41
SYNC-201ENST00000373484 NMES1Q9C002 83 aa17.58■□□□□ 0.41
SYNC-201ENST00000373484 GDF2Q9UK05 429 aaPredicted RBP17.58■□□□□ 0.41
SYNC-201ENST00000373484 RHBDD3Q9Y3P4 386 aa17.58■□□□□ 0.41
SYNC-201ENST00000373484 LRP12Q9Y561 859 aa17.58■□□□□ 0.41
SYNC-201ENST00000373484 CSMD2Q7Z408 3487 aa17.58■□□□□ 0.4
SYNC-201ENST00000373484 A0A0B4J2A0 478 aa17.58■□□□□ 0.4
SYNC-201ENST00000373484 FAM74A7A6NL05 159 aa17.58■□□□□ 0.4
SYNC-201ENST00000373484 DBX1A6NMT0 343 aa17.58■□□□□ 0.4
SYNC-201ENST00000373484 CYSRT1A8MQ03 144 aa17.58■□□□□ 0.4
SYNC-201ENST00000373484 BPNT1O95861 308 aa17.58■□□□□ 0.4
SYNC-201ENST00000373484 CELA3BP08861 270 aa17.58■□□□□ 0.4
SYNC-201ENST00000373484 SPARCP09486 303 aa17.58■□□□□ 0.4
SYNC-201ENST00000373484 CECR9P0C854 216 aa17.58■□□□□ 0.4
SYNC-201ENST00000373484 TPT1P13693 172 aaKnown RBP17.58■□□□□ 0.4
SYNC-201ENST00000373484 MSR1P21757 451 aa17.58■□□□□ 0.4
SYNC-201ENST00000373484 IDH3GP51553 393 aaPredicted RBP17.58■□□□□ 0.4
SYNC-201ENST00000373484 ODF4Q2M2E3 257 aa17.58■□□□□ 0.4
SYNC-201ENST00000373484 FAM74A3Q4VXF1 159 aa17.58■□□□□ 0.4
SYNC-201ENST00000373484 MYPOPQ86VE0 399 aaPredicted RBP17.58■□□□□ 0.4
SYNC-201ENST00000373484 FAM46BQ96A09 425 aa17.58■□□□□ 0.4
SYNC-201ENST00000373484 FOXN4Q96NZ1 517 aa17.58■□□□□ 0.4
SYNC-201ENST00000373484 PLCE1Q9P212 2302 aa17.58■□□□□ 0.4
SYNC-201ENST00000373484 SHPKQ9UHJ6 478 aa17.58■□□□□ 0.4
SYNC-201ENST00000373484 PCDHB10Q9UN67 800 aa17.58■□□□□ 0.4
SYNC-201ENST00000373484 AKAP6Q13023 2319 aa17.57■□□□□ 0.4
SYNC-201ENST00000373484 F5H0A9 414 aaPredicted RBP17.57■□□□□ 0.4
SYNC-201ENST00000373484 PLATP00750 562 aa17.57■□□□□ 0.4
SYNC-201ENST00000373484 MMP7P09237 267 aaPredicted RBP17.57■□□□□ 0.4
SYNC-201ENST00000373484 MFGE8Q08431 387 aaPredicted RBP17.57■□□□□ 0.4
SYNC-201ENST00000373484 SPOCK1Q08629 439 aa17.57■□□□□ 0.4
SYNC-201ENST00000373484 EIF2B1Q14232 305 aaKnown RBP17.57■□□□□ 0.4
SYNC-201ENST00000373484 FAM74A1Q5RGS3 127 aa17.57■□□□□ 0.4
SYNC-201ENST00000373484 SHEQ5VZ18 495 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms