RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 TCTAP57738 103 aa12.63□□□□□ -0.39
LMX1B-202ENST00000373474 SPEM1Q8N4L4 309 aa12.63□□□□□ -0.39
LMX1B-202ENST00000373474 OR2D3Q8NGH3 330 aa12.63□□□□□ -0.39
LMX1B-202ENST00000373474 ASB10Q8WXI3 467 aa12.63□□□□□ -0.39
LMX1B-202ENST00000373474 ALKBH3Q96Q83 286 aaPredicted RBP12.63□□□□□ -0.39
LMX1B-202ENST00000373474 BCL3P20749 454 aa12.63□□□□□ -0.39
LMX1B-202ENST00000373474 RHOBP62745 196 aa12.63□□□□□ -0.39
LMX1B-202ENST00000373474 C1QTNF12Q5T7M4 302 aa12.63□□□□□ -0.39
LMX1B-202ENST00000373474 FBXL14Q8N1E6 418 aa12.63□□□□□ -0.39
LMX1B-202ENST00000373474 ZNF738Q8NE65 137 aa12.63□□□□□ -0.39
LMX1B-202ENST00000373474 CADM4Q8NFZ8 388 aa12.63□□□□□ -0.39
LMX1B-202ENST00000373474 TIMD4Q96H15 378 aa12.63□□□□□ -0.39
LMX1B-202ENST00000373474 M0R1B8 84 aa12.62□□□□□ -0.39
LMX1B-202ENST00000373474 LIMK1P53667 647 aa12.62□□□□□ -0.39
LMX1B-202ENST00000373474 PIK3IP1Q96FE7 263 aa12.62□□□□□ -0.39
LMX1B-202ENST00000373474 MOGAT1Q96PD6 335 aa12.62□□□□□ -0.39
LMX1B-202ENST00000373474 HES4Q9HCC6 221 aa12.62□□□□□ -0.39
LMX1B-202ENST00000373474 RER1O15258 196 aa12.62□□□□□ -0.39
LMX1B-202ENST00000373474 ONECUT2O95948 504 aa12.62□□□□□ -0.39
LMX1B-202ENST00000373474 ZNF816Q0VGE8 651 aaPredicted RBP12.62□□□□□ -0.39
LMX1B-202ENST00000373474 FAHD2BQ6P2I3 314 aaPredicted RBP12.62□□□□□ -0.39
LMX1B-202ENST00000373474 C9orf62Q8N4C0 152 aa12.62□□□□□ -0.39
LMX1B-202ENST00000373474 FAHD2AQ96GK7 314 aa12.62□□□□□ -0.39
LMX1B-202ENST00000373474 RNF2Q99496 336 aa12.62□□□□□ -0.39
LMX1B-202ENST00000373474 SOX15O60248 233 aa12.62□□□□□ -0.39
LMX1B-202ENST00000373474 SLC25A5P05141 298 aaKnown RBP12.62□□□□□ -0.39
LMX1B-202ENST00000373474 CHRNA7P36544 502 aa12.62□□□□□ -0.39
LMX1B-202ENST00000373474 HYAL1Q12794 435 aa12.62□□□□□ -0.39
LMX1B-202ENST00000373474 SMUG1Q53HV7 270 aa12.62□□□□□ -0.39
LMX1B-202ENST00000373474 OR4F17Q8NGA8 305 aa12.62□□□□□ -0.39
LMX1B-202ENST00000373474 AP5S1Q9NUS5 200 aa12.62□□□□□ -0.39
LMX1B-202ENST00000373474 OCIAD1Q9NX40 245 aa12.62□□□□□ -0.39
LMX1B-202ENST00000373474 FLRT3Q9NZU0 649 aa12.62□□□□□ -0.39
LMX1B-202ENST00000373474 CDC34P49427 236 aaPredicted RBP12.62□□□□□ -0.39
LMX1B-202ENST00000373474 ERVS71-1P61550 626 aa12.62□□□□□ -0.39
LMX1B-202ENST00000373474 RAB32Q13637 225 aa12.62□□□□□ -0.39
LMX1B-202ENST00000373474 IGFBP7Q16270 282 aa12.62□□□□□ -0.39
LMX1B-202ENST00000373474 SP6Q3SY56 376 aa12.62□□□□□ -0.39
LMX1B-202ENST00000373474 Q6ZS52 159 aa12.62□□□□□ -0.39
LMX1B-202ENST00000373474 MRGPREQ86SM8 312 aa12.62□□□□□ -0.39
LMX1B-202ENST00000373474 TMEM116Q8NCL8 245 aa12.62□□□□□ -0.39
LMX1B-202ENST00000373474 ZNF707Q96C28 371 aaPredicted RBP12.62□□□□□ -0.39
LMX1B-202ENST00000373474 SARAFQ96BY9 339 aa12.62□□□□□ -0.39
LMX1B-202ENST00000373474 ZNF256Q9Y2P7 627 aaPredicted RBP12.62□□□□□ -0.39
LMX1B-202ENST00000373474 DOCK5Q9H7D0 1870 aa12.61□□□□□ -0.39
LMX1B-202ENST00000373474 ZNF253O75346 499 aa12.61□□□□□ -0.39
LMX1B-202ENST00000373474 SEMG1P04279 462 aa12.61□□□□□ -0.39
LMX1B-202ENST00000373474 AGFG1P52594 562 aaKnown RBP12.61□□□□□ -0.39
LMX1B-202ENST00000373474 EIF4EBP2Q13542 120 aaPredicted RBP12.61□□□□□ -0.39
LMX1B-202ENST00000373474 DPPA3Q6W0C5 159 aa12.61□□□□□ -0.39
LMX1B-202ENST00000373474 OR10AD1Q8NGE0 317 aa12.61□□□□□ -0.39
LMX1B-202ENST00000373474 RHBDL1O75783 438 aa12.61□□□□□ -0.39
LMX1B-202ENST00000373474 COL9A1P20849 921 aa12.61□□□□□ -0.39
LMX1B-202ENST00000373474 BMI1P35226 326 aa12.61□□□□□ -0.39
LMX1B-202ENST00000373474 HIST3H3Q16695 136 aa12.61□□□□□ -0.39
LMX1B-202ENST00000373474 SMIM21Q3B7S5 101 aa12.61□□□□□ -0.39
LMX1B-202ENST00000373474 MESTQ5EB52 335 aa12.61□□□□□ -0.39
LMX1B-202ENST00000373474 FDX2Q6P4F2 183 aa12.61□□□□□ -0.39
LMX1B-202ENST00000373474 NPEPL1Q8NDH3 523 aa12.61□□□□□ -0.39
LMX1B-202ENST00000373474 OR5C1Q8NGR4 320 aa12.61□□□□□ -0.39
LMX1B-202ENST00000373474 NAA60Q9H7X0 242 aa12.61□□□□□ -0.39
LMX1B-202ENST00000373474 FRRS1LQ9P0K9 344 aa12.61□□□□□ -0.39
LMX1B-202ENST00000373474 C3orf85A0A1B0GTC6 90 aa12.61□□□□□ -0.39
LMX1B-202ENST00000373474 POU2F2P09086 479 aa12.61□□□□□ -0.39
LMX1B-202ENST00000373474 IL24Q13007 206 aa12.61□□□□□ -0.39
LMX1B-202ENST00000373474 PWWP2BQ6NUJ5 590 aa12.61□□□□□ -0.39
LMX1B-202ENST00000373474 Q8IYB0 196 aa12.61□□□□□ -0.39
LMX1B-202ENST00000373474 GABRG3Q99928 467 aa12.61□□□□□ -0.39
LMX1B-202ENST00000373474 KCNK15Q9H427 330 aa12.61□□□□□ -0.39
LMX1B-202ENST00000373474 TMEM30CPA0ZSE6 113 aa12.61□□□□□ -0.39
LMX1B-202ENST00000373474 FAM74A7A6NL05 159 aa12.61□□□□□ -0.39
LMX1B-202ENST00000373474 NUFIP2Q7Z417 695 aaKnown RBP12.61□□□□□ -0.39
LMX1B-202ENST00000373474 MRPS18AQ9NVS2 196 aaKnown RBP12.61□□□□□ -0.39
LMX1B-202ENST00000373474 TMEM267Q0VDI3 215 aaPredicted RBP12.6□□□□□ -0.39
LMX1B-202ENST00000373474 OR11H7Q8NGC8 314 aa12.6□□□□□ -0.39
LMX1B-202ENST00000373474 ATAD5Q96QE3 1844 aa12.6□□□□□ -0.39
LMX1B-202ENST00000373474 RGPD4Q7Z3J3 1758 aa12.6□□□□□ -0.39
LMX1B-202ENST00000373474 SHANK3Q9BYB0 1731 aa12.6□□□□□ -0.39
LMX1B-202ENST00000373474 ADAM20O43506 726 aa12.6□□□□□ -0.39
LMX1B-202ENST00000373474 NTN1O95631 604 aa12.6□□□□□ -0.39
LMX1B-202ENST00000373474 CTLA4P16410 223 aa12.6□□□□□ -0.39
LMX1B-202ENST00000373474 OR3A1P47881 315 aa12.6□□□□□ -0.39
LMX1B-202ENST00000373474 ZNF79Q15937 498 aa12.6□□□□□ -0.39
LMX1B-202ENST00000373474 ATG4DQ86TL0 474 aaPredicted RBP12.6□□□□□ -0.39
LMX1B-202ENST00000373474 CARFQ8N187 725 aa12.6□□□□□ -0.39
LMX1B-202ENST00000373474 TMEM56Q96MV1 263 aa12.6□□□□□ -0.39
LMX1B-202ENST00000373474 A0A1W2PQD3 144 aa12.6□□□□□ -0.39
LMX1B-202ENST00000373474 H3BP45 60 aa12.6□□□□□ -0.39
LMX1B-202ENST00000373474 M0QZ24 198 aa12.6□□□□□ -0.39
LMX1B-202ENST00000373474 PRSS1P07477 247 aa12.6□□□□□ -0.39
LMX1B-202ENST00000373474 KLF9Q13886 244 aaPredicted RBP12.6□□□□□ -0.39
LMX1B-202ENST00000373474 SCGB1D4Q6XE38 83 aa12.6□□□□□ -0.39
LMX1B-202ENST00000373474 OR10G8Q8NGN5 311 aa12.6□□□□□ -0.39
LMX1B-202ENST00000373474 MBD1Q9UIS9 605 aaPredicted RBP12.6□□□□□ -0.39
LMX1B-202ENST00000373474 MICAL3Q7RTP6 2002 aa12.6□□□□□ -0.39
LMX1B-202ENST00000373474 LTBP4Q8N2S1 1624 aa12.6□□□□□ -0.39
LMX1B-202ENST00000373474 A0A1W2PPV9 198 aa12.6□□□□□ -0.39
LMX1B-202ENST00000373474 MPZL1O95297 269 aa12.6□□□□□ -0.39
LMX1B-202ENST00000373474 GALNSP34059 522 aa12.6□□□□□ -0.39
LMX1B-202ENST00000373474 C9orf50Q5SZB4 431 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms