RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 OR1P1Q8NH06 330 aa10.14□□□□□ -0.79
SMARCA1-201ENST00000371121 NPRL2Q8WTW4 380 aa10.14□□□□□ -0.79
SMARCA1-201ENST00000371121 SLC2A9Q9NRM0 540 aa10.14□□□□□ -0.79
SMARCA1-201ENST00000371121 ANXA10Q9UJ72 324 aa10.14□□□□□ -0.79
SMARCA1-201ENST00000371121 POLR3KQ9Y2Y1 108 aaPredicted RBP10.14□□□□□ -0.79
SMARCA1-201ENST00000371121 GNRH1P01148 92 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 ATXN8OSP0DMR3 200 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 SGCGQ13326 291 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 IL13RA2Q14627 380 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 AKR1C8PQ5T2L2 129 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 LIAT1Q6ZQX7 453 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 C12orf76Q8N812 135 aaPredicted RBP10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 WFIKKN1Q96NZ8 548 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 C14orf166Q9Y224 244 aaKnown RBP10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 A6NIZ1 184 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 ZNF732B4DXR9 585 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 RER1O15258 196 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 NUPR1O60356 82 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 MMP7P09237 267 aaPredicted RBP10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 GALNSP34059 522 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 PAX9P55771 341 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 RAP1BP61224 184 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 TDRG1Q3Y452 100 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 CHRFAM7AQ494W8 412 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 CPEB2Q7Z5Q1 589 aaKnown RBP10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 OR5L1Q8NGL2 311 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 RTN4IP1Q8WWV3 396 aaPredicted RBP10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 R3HDM4Q96D70 268 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 FAM71F1Q96KD3 344 aaPredicted RBP10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 SIGLEC12Q96PQ1 595 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 GPHA2Q96T91 129 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 NIPSNAP3BQ9BS92 247 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 ZNF701Q9NV72 531 aaPredicted RBP10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 A0A1B0GUS0 222 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 NKX2-6A6NCS4 301 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 PITX3O75364 302 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 IGHG1P01857 330 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 ZNF823P16415 610 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 RGS19P49795 217 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 EXT1Q16394 746 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 PHLDA2Q53GA4 152 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 TMEM31Q5JXX7 168 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 TCEAL6Q6IPX3 200 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 OGFOD3Q6PK18 319 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 BRICD5Q6PL45 260 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 RPP25Q9BUL9 199 aaKnown RBP10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 PLA2G2FQ9BZM2 168 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 CERS4Q9HA82 394 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 SDF2L1Q9HCN8 221 aa10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 NXT1Q9UKK6 140 aaKnown RBP10.13□□□□□ -0.79
SMARCA1-201ENST00000371121 KIR2DL5BA0A0G2JN68 375 aa10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 KIR2DL5BA0A0G2JPC4 375 aa10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 TMEM210A6NLX4 147 aa10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 ZNF814B7Z6K7 855 aa10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 COL9A1P20849 921 aa10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 OMGP23515 440 aa10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 ELLP55199 621 aaPredicted RBP10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 CXorf66Q5JRM2 361 aaPredicted RBP10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 DCAF10Q5QP82 559 aa10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 P4HA3Q7Z4N8 544 aa10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 CENPVQ7Z7K6 275 aaPredicted RBP10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 KIR2DL5AQ8N109 375 aa10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 SLC22A18ASQ8N1D0 253 aa10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 OR2C3Q8N628 320 aa10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 OR10G4Q8NGN3 311 aa10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 TSLPQ969D9 159 aa10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 FAAP24Q9BTP7 215 aa10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 SEMA5BQ9P283 1151 aa10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 C2orf72A6NCS6 295 aa10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 FRG2CA6NGY1 282 aa10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 SHISA8B8ZZ34 492 aa10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 ALG1L2C9J202 215 aa10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 CYB5R3P00387 301 aaPredicted RBP10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 ZNF25P17030 456 aaPredicted RBP10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 PGCP20142 388 aa10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 DCAF7P61962 342 aa10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 SMAD4Q13485 552 aaKnown RBP10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 HIST1H2AAQ96QV6 131 aa10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 ELOVL1Q9BW60 279 aa10.12□□□□□ -0.79
SMARCA1-201ENST00000371121 IGKV1-27A0A075B6S5 117 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 OPRM1P35372 400 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 KIR2DL1P43626 348 aaPredicted RBP10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 MPV17LQ2QL34 196 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 SLC22A25Q6T423 547 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 C1orf87Q8N0U7 546 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 PLPP5Q8NEB5 264 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 TOMM40LQ969M1 308 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 Q96M66 194 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 NUDT22Q9BRQ3 303 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 DLEU1O43261 78 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 YPEL1O60688 119 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 TK1P04183 234 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 ACRP10323 421 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 CEACAM1P13688 526 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 DYNLT3P51808 116 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 POLR2HP52434 150 aaKnown RBP10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 POU3F1Q03052 451 aaPredicted RBP10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 ZP4Q12836 540 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 NFATC4Q14934 902 aa10.11□□□□□ -0.79
SMARCA1-201ENST00000371121 SLC25A26Q70HW3 274 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms