RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 ARR3P36575 388 aa1.62□□□□□ -2.15
ECHDC1-201ENST00000368287 TGFBR2P37173 567 aa1.62□□□□□ -2.15
ECHDC1-201ENST00000368287 BIKQ13323 160 aa1.62□□□□□ -2.15
ECHDC1-201ENST00000368287 SSX1Q16384 188 aa1.62□□□□□ -2.15
ECHDC1-201ENST00000368287 ACTBL2Q562R1 376 aa1.62□□□□□ -2.15
ECHDC1-201ENST00000368287 CLEC18BQ6UXF7 455 aa1.62□□□□□ -2.15
ECHDC1-201ENST00000368287 TRMT10CQ7L0Y3 403 aaKnown RBP1.62□□□□□ -2.15
ECHDC1-201ENST00000368287 LINC00596Q86U02 117 aa1.62□□□□□ -2.15
ECHDC1-201ENST00000368287 OR8S1Q8NH09 359 aa1.62□□□□□ -2.15
ECHDC1-201ENST00000368287 LGALS14Q8TCE9 139 aa1.62□□□□□ -2.15
ECHDC1-201ENST00000368287 CCL17Q92583 94 aa1.62□□□□□ -2.15
ECHDC1-201ENST00000368287 ZBED3Q96IU2 234 aaPredicted RBP1.62□□□□□ -2.15
ECHDC1-201ENST00000368287 ZNF75AQ96N20 296 aa1.62□□□□□ -2.15
ECHDC1-201ENST00000368287 PLA2G12AQ9BZM1 189 aa1.62□□□□□ -2.15
ECHDC1-201ENST00000368287 PRORYQ9H606 182 aa1.62□□□□□ -2.15
ECHDC1-201ENST00000368287 PARP11Q9NR21 331 aa1.62□□□□□ -2.15
ECHDC1-201ENST00000368287 RBM22Q9NW64 420 aaKnown RBP eCLIP1.62□□□□□ -2.157e-6■■■■□ 24.6
ECHDC1-201ENST00000368287 ZNF586Q9NXT0 402 aa1.62□□□□□ -2.15
ECHDC1-201ENST00000368287 HMGXB4Q9UGU5 601 aa1.62□□□□□ -2.15
ECHDC1-201ENST00000368287 LTBP4Q8N2S1 1624 aa1.62□□□□□ -2.15
ECHDC1-201ENST00000368287 OR2AT4A6NND4 320 aa1.61□□□□□ -2.15
ECHDC1-201ENST00000368287 C4orf51C9J302 202 aa1.61□□□□□ -2.15
ECHDC1-201ENST00000368287 ENTPD6O75354 484 aa1.61□□□□□ -2.15
ECHDC1-201ENST00000368287 IGLV6-57P01721 117 aa1.61□□□□□ -2.15
ECHDC1-201ENST00000368287 CDK1P06493 297 aa1.61□□□□□ -2.15
ECHDC1-201ENST00000368287 Q499Y3 187 aa1.61□□□□□ -2.15
ECHDC1-201ENST00000368287 PDZD11Q5EBL8 140 aa1.61□□□□□ -2.15
ECHDC1-201ENST00000368287 RESP18Q5W5W9 173 aa1.61□□□□□ -2.15
ECHDC1-201ENST00000368287 ZNF660Q6AZW8 331 aaPredicted RBP1.61□□□□□ -2.15
ECHDC1-201ENST00000368287 ZFAND6Q6FIF0 208 aa1.61□□□□□ -2.15
ECHDC1-201ENST00000368287 TPGS1Q6ZTW0 290 aa1.61□□□□□ -2.15
ECHDC1-201ENST00000368287 MARCH3Q86UD3 253 aa1.61□□□□□ -2.15
ECHDC1-201ENST00000368287 ZNF664Q8N3J9 261 aa1.61□□□□□ -2.15
ECHDC1-201ENST00000368287 OR5H2Q8NGV7 314 aa1.61□□□□□ -2.15
ECHDC1-201ENST00000368287 OR2AE1Q8NHA4 323 aa1.61□□□□□ -2.15
ECHDC1-201ENST00000368287 UBA3Q8TBC4 463 aa1.61□□□□□ -2.15
ECHDC1-201ENST00000368287 OR2V2Q96R30 315 aa1.61□□□□□ -2.15
ECHDC1-201ENST00000368287 SIKE1Q9BRV8 207 aa1.61□□□□□ -2.15
ECHDC1-201ENST00000368287 THTPAQ9BU02 230 aa1.61□□□□□ -2.15
ECHDC1-201ENST00000368287 API5Q9BZZ5 524 aaKnown RBP1.61□□□□□ -2.15
ECHDC1-201ENST00000368287 SRRQ9GZT4 340 aa1.61□□□□□ -2.15
ECHDC1-201ENST00000368287 RAB1BQ9H0U4 201 aa1.61□□□□□ -2.15
ECHDC1-201ENST00000368287 DSN1Q9H410 356 aa1.61□□□□□ -2.15
ECHDC1-201ENST00000368287 PLEKHA1Q9HB21 404 aa1.61□□□□□ -2.15
ECHDC1-201ENST00000368287 VAPAQ9P0L0 249 aa1.61□□□□□ -2.15
ECHDC1-201ENST00000368287 CYB5R1Q9UHQ9 305 aa1.61□□□□□ -2.15
ECHDC1-201ENST00000368287 ZNF230Q9UIE0 474 aaPredicted RBP1.61□□□□□ -2.15
ECHDC1-201ENST00000368287 A0A1B0GW15 77 aa1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 IGLL5B9A064 214 aa1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 K7EPK0 472 aa1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 GYG2O15488 501 aa1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 SNRPAP09012 282 aaKnown RBP1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 CGB3P0DN86 165 aa1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 CGB7P0DN87 165 aa1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 IMPA1P29218 277 aa1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 SLC18A1P54219 525 aa1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 KLF3P57682 345 aaPredicted RBP1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 STX4Q12846 297 aa1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 GPR176Q14439 515 aa1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 KRTAP25-1Q3LHN0 102 aa1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 DEFB134Q4QY38 66 aa1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 IDNKQ5T6J7 187 aa1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 ZNF773Q6PK81 442 aa1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 USP50Q70EL3 339 aaPredicted RBP1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 ZFP82Q8N141 532 aa1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 OR6K2Q8NGY2 324 aa1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 BLNKQ8WV28 456 aa1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 TMIGD2Q96BF3 282 aa1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 OR2M4Q96R27 311 aa1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 LINC01587Q99440 93 aa1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 VAT1Q99536 393 aa1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 COPS4Q9BT78 406 aa1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 VCX3AQ9NNX9 186 aa1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 TAC3Q9UHF0 121 aa1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 NXT1Q9UKK6 140 aaKnown RBP1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 CARHSP1Q9Y2V2 147 aaKnown RBP1.6□□□□□ -2.15
ECHDC1-201ENST00000368287 A8MWP4 228 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 C9JQL5 133 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 H3BP45 60 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 H3BQ85 93 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 hCG_2039718K7EN88 272 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 COX7A2P2O60397 106 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 SHOX2O60902 331 aaPredicted RBP1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 ZMPSTE24O75844 475 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 IGKV1D-33P01593 117 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 IGKV1-33P01594 117 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 CCL2P13500 99 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 CCNOP22674 350 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 RANBP1P43487 201 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 XKP51811 444 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 UBE2KP61086 200 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 TNNC1P63316 161 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 TRDNQ13061 729 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 C18orf21Q32NC0 220 aaPredicted RBP1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 Q6ZT83 130 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 GALNT10Q86SR1 603 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 NT5DC3Q86UY8 548 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 KRTAP13-1Q8IUC0 172 aa1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 RBM45Q8IUH3 476 aaKnown RBP1.59□□□□□ -2.15
ECHDC1-201ENST00000368287 CDRT4Q8N9R6 151 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms