RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 PDCD6O75340 191 aa12.34□□□□□ -0.43
SMC5-201ENST00000361138 SLC36A1Q7Z2H8 476 aa12.34□□□□□ -0.43
SMC5-201ENST00000361138 NEIL1Q96FI4 390 aaPredicted RBP12.34□□□□□ -0.43
SMC5-201ENST00000361138 SLC35E1Q96K37 410 aa12.34□□□□□ -0.43
SMC5-201ENST00000361138 AQP10Q96PS8 301 aa12.34□□□□□ -0.43
SMC5-201ENST00000361138 LANCL2Q9NS86 450 aa12.34□□□□□ -0.43
SMC5-201ENST00000361138 SIPA1L1O43166 1804 aa12.34□□□□□ -0.43
SMC5-201ENST00000361138 NRXN2Q9P2S2 1712 aa12.34□□□□□ -0.43
SMC5-201ENST00000361138 TRBV5-7A0A0A0MS05 114 aa12.34□□□□□ -0.43
SMC5-201ENST00000361138 LSRQ86X29 649 aaPredicted RBP12.34□□□□□ -0.43
SMC5-201ENST00000361138 NAT8BQ9UHF3 227 aa12.34□□□□□ -0.43
SMC5-201ENST00000361138 A0A096LPE4 126 aa12.34□□□□□ -0.43
SMC5-201ENST00000361138 A0A1W2PPZ6 126 aa12.34□□□□□ -0.43
SMC5-201ENST00000361138 METTL12A8MUP2 240 aa12.34□□□□□ -0.43
SMC5-201ENST00000361138 CD8AP01732 235 aa12.34□□□□□ -0.43
SMC5-201ENST00000361138 ADRA2AP08913 450 aa12.34□□□□□ -0.43
SMC5-201ENST00000361138 TMEM196Q5HYL7 178 aa12.34□□□□□ -0.43
SMC5-201ENST00000361138 C1QL3Q5VWW1 255 aa12.34□□□□□ -0.43
SMC5-201ENST00000361138 ADAMTS17Q8TE56 1095 aa12.34□□□□□ -0.43
SMC5-201ENST00000361138 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.34□□□□□ -0.43
SMC5-201ENST00000361138 SOSTQ9BQB4 213 aa12.34□□□□□ -0.43
SMC5-201ENST00000361138 ANGPTL4Q9BY76 406 aa12.34□□□□□ -0.43
SMC5-201ENST00000361138 CARHSP1Q9Y2V2 147 aaKnown RBP12.34□□□□□ -0.43
SMC5-201ENST00000361138 HEXAP06865 529 aa12.33□□□□□ -0.43
SMC5-201ENST00000361138 B2MP61769 119 aa12.33□□□□□ -0.43
SMC5-201ENST00000361138 ZXDCQ2QGD7 858 aaPredicted RBP12.33□□□□□ -0.43
SMC5-201ENST00000361138 VAX1Q5SQQ9 334 aa12.33□□□□□ -0.43
SMC5-201ENST00000361138 AQP3Q92482 292 aa12.33□□□□□ -0.43
SMC5-201ENST00000361138 FOXQ1Q9C009 403 aa12.33□□□□□ -0.43
SMC5-201ENST00000361138 LHX9Q9NQ69 397 aa12.33□□□□□ -0.43
SMC5-201ENST00000361138 GSN-AS1Q9NRJ2 163 aa12.33□□□□□ -0.43
SMC5-201ENST00000361138 IL17BQ9UHF5 180 aa12.33□□□□□ -0.43
SMC5-201ENST00000361138 CHST1O43916 411 aa12.33□□□□□ -0.44
SMC5-201ENST00000361138 HOXB1P14653 301 aaPredicted RBP12.33□□□□□ -0.44
SMC5-201ENST00000361138 PEBP1P30086 187 aaKnown RBP12.33□□□□□ -0.44
SMC5-201ENST00000361138 LPAR6P43657 344 aa12.33□□□□□ -0.44
SMC5-201ENST00000361138 ZNF260Q3ZCT1 412 aa12.33□□□□□ -0.44
SMC5-201ENST00000361138 CHRDL1Q9BU40 450 aa12.33□□□□□ -0.44
SMC5-201ENST00000361138 GGACTQ9BVM4 153 aa12.33□□□□□ -0.44
SMC5-201ENST00000361138 ZNF385CQ66K41 422 aaPredicted RBP12.33□□□□□ -0.44
SMC5-201ENST00000361138 ATRAIDQ6UW56 229 aa12.33□□□□□ -0.44
SMC5-201ENST00000361138 AGBL5Q8NDL9 886 aa12.33□□□□□ -0.44
SMC5-201ENST00000361138 OR10V1Q8NGI7 309 aa12.33□□□□□ -0.44
SMC5-201ENST00000361138 ROBO4Q8WZ75 1007 aa12.33□□□□□ -0.44
SMC5-201ENST00000361138 ADAT3Q96EY9 351 aaPredicted RBP12.33□□□□□ -0.44
SMC5-201ENST00000361138 NPTNQ9Y639 398 aa12.33□□□□□ -0.44
SMC5-201ENST00000361138 DDTP30046 118 aa12.33□□□□□ -0.44
SMC5-201ENST00000361138 OR13G1Q8NGZ3 307 aa12.33□□□□□ -0.44
SMC5-201ENST00000361138 ZNF391Q9UJN7 358 aa12.33□□□□□ -0.44
SMC5-201ENST00000361138 HSF4Q9ULV5 492 aa12.33□□□□□ -0.44
SMC5-201ENST00000361138 KCNK7Q9Y2U2 307 aa12.33□□□□□ -0.44
SMC5-201ENST00000361138 HOXC4P09017 264 aaPredicted RBP12.33□□□□□ -0.44
SMC5-201ENST00000361138 ERRFI1Q9UJM3 462 aaPredicted RBP12.33□□□□□ -0.44
SMC5-201ENST00000361138 HRKO00198 91 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 UPK3AO75631 287 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 TRGC2P03986 189 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 ATP6V0CP27449 155 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 CDC34P49427 236 aaPredicted RBP12.32□□□□□ -0.44
SMC5-201ENST00000361138 RPS16P62249 146 aaKnown RBP12.32□□□□□ -0.44
SMC5-201ENST00000361138 GALMQ96C23 342 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 BET1LQ9NYM9 111 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 ZNF831Q5JPB2 1677 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 A0A0G2JK05 382 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 A0A1W2PQD3 144 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 HSBP1O75506 76 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 CTGFP29279 349 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 CDX1P47902 265 aaPredicted RBP12.32□□□□□ -0.44
SMC5-201ENST00000361138 RPS4XP62701 263 aaKnown RBP12.32□□□□□ -0.44
SMC5-201ENST00000361138 Q6ZN92 141 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 ZNF707Q96C28 371 aaPredicted RBP12.32□□□□□ -0.44
SMC5-201ENST00000361138 ZNF576Q9H609 170 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 SLC2A9Q9NRM0 540 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 TRAV34A0A0B4J273 112 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 H3BMH7 237 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 KHDC3LQ587J8 217 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 RPS19BP1Q86WX3 136 aaKnown RBP12.32□□□□□ -0.44
SMC5-201ENST00000361138 MTCH2Q9Y6C9 303 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 NKX2-6A6NCS4 301 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 K7EQM0 130 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 ENSAO43768 121 aaKnown RBP12.32□□□□□ -0.44
SMC5-201ENST00000361138 HRASP01112 189 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 KRASP01116 189 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 IGKV1D-16P01601 117 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 CYB561P49447 251 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 TRIM61Q5EBN2 209 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 C16orf82Q7Z2V1 217 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 MFRPQ9BY79 579 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 PIPOXQ9P0Z9 390 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 MMP17Q9ULZ9 603 aa12.32□□□□□ -0.44
SMC5-201ENST00000361138 A6NCN8 305 aa12.31□□□□□ -0.44
SMC5-201ENST00000361138 CXorf65A6NEN9 183 aa12.31□□□□□ -0.44
SMC5-201ENST00000361138 RRP8O43159 456 aaKnown RBP12.31□□□□□ -0.44
SMC5-201ENST00000361138 CD46P15529 392 aa12.31□□□□□ -0.44
SMC5-201ENST00000361138 SRSF5Q13243 272 aaKnown RBP12.31□□□□□ -0.44
SMC5-201ENST00000361138 ATP6V1FQ16864 119 aa12.31□□□□□ -0.44
SMC5-201ENST00000361138 ZNF468Q5VIY5 522 aaPredicted RBP12.31□□□□□ -0.44
SMC5-201ENST00000361138 CYB561D1Q8N8Q1 229 aa12.31□□□□□ -0.44
SMC5-201ENST00000361138 RNF133Q8WVZ7 376 aa12.31□□□□□ -0.44
SMC5-201ENST00000361138 TMEM147Q9BVK8 224 aa12.31□□□□□ -0.44
SMC5-201ENST00000361138 CACFD1Q9UGQ2 172 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms