RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 ELP2Q6IA86 826 aa11.37□□□□□ -0.59
SQSTM1-201ENST00000360718 CPEB3Q8NE35 698 aaKnown RBP11.37□□□□□ -0.59
SQSTM1-201ENST00000360718 MARC2Q969Z3 335 aa11.37□□□□□ -0.59
SQSTM1-201ENST00000360718 STARD4Q96DR4 205 aa11.37□□□□□ -0.59
SQSTM1-201ENST00000360718 URM1Q9BTM9 101 aaKnown RBP11.37□□□□□ -0.59
SQSTM1-201ENST00000360718 NMES1Q9C002 83 aa11.37□□□□□ -0.59
SQSTM1-201ENST00000360718 LPAR5Q9H1C0 372 aa11.37□□□□□ -0.59
SQSTM1-201ENST00000360718 WDR13Q9H1Z4 485 aa11.37□□□□□ -0.59
SQSTM1-201ENST00000360718 BARX1Q9HBU1 254 aaPredicted RBP11.37□□□□□ -0.59
SQSTM1-201ENST00000360718 CHMP1AQ9HD42 196 aaPredicted RBP11.37□□□□□ -0.59
SQSTM1-201ENST00000360718 HEATR1Q9H583 2144 aaKnown RBP11.36□□□□□ -0.59
SQSTM1-201ENST00000360718 PCNX1Q96RV3 2341 aa11.36□□□□□ -0.59
SQSTM1-201ENST00000360718 NBASA2RRP1 2371 aa11.36□□□□□ -0.59
SQSTM1-201ENST00000360718 C13orf42A0A1B0GVH6 325 aa11.36□□□□□ -0.59
SQSTM1-201ENST00000360718 RAB19A4D1S5 217 aa11.36□□□□□ -0.59
SQSTM1-201ENST00000360718 SSX5O60225 188 aa11.36□□□□□ -0.59
SQSTM1-201ENST00000360718 LYZL6O75951 148 aa11.36□□□□□ -0.59
SQSTM1-201ENST00000360718 CGAP01215 116 aa11.36□□□□□ -0.59
SQSTM1-201ENST00000360718 EDN3P14138 238 aa11.36□□□□□ -0.59
SQSTM1-201ENST00000360718 HOXB1P14653 301 aaPredicted RBP11.36□□□□□ -0.59
SQSTM1-201ENST00000360718 CCL1P22362 96 aa11.36□□□□□ -0.59
SQSTM1-201ENST00000360718 TSC22D1Q15714 1073 aa11.36□□□□□ -0.59
SQSTM1-201ENST00000360718 ADAD2Q8NCV1 583 aaKnown RBP11.36□□□□□ -0.59
SQSTM1-201ENST00000360718 C1orf162Q8NEQ5 155 aaPredicted RBP11.36□□□□□ -0.59
SQSTM1-201ENST00000360718 TMEM185AQ8NFB2 350 aa11.36□□□□□ -0.59
SQSTM1-201ENST00000360718 OR56B1Q8NGI3 324 aa11.36□□□□□ -0.59
SQSTM1-201ENST00000360718 SOX7Q9BT81 388 aa11.36□□□□□ -0.59
SQSTM1-201ENST00000360718 SFXN3Q9BWM7 321 aa11.36□□□□□ -0.59
SQSTM1-201ENST00000360718 ZNF391Q9UJN7 358 aa11.36□□□□□ -0.59
SQSTM1-201ENST00000360718 SMG1Q96Q15 3661 aaKnown RBP11.36□□□□□ -0.59
SQSTM1-201ENST00000360718 A0A0B4J2A0 478 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 DBX1A6NMT0 343 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 MPIG6BO95866 241 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 TPT1P13693 172 aaKnown RBP11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 HIST1H1DP16402 221 aaKnown RBP11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 CCNOP22674 350 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 CEACAM8P31997 349 aaPredicted RBP11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 APLNRP35414 380 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 DEFA5Q01523 94 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 P2RY6Q15077 328 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 SLC22A6Q4U2R8 563 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 ZNF610Q8N9Z0 462 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 OR5T2Q8NGG2 359 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 MARCH1Q8TCQ1 289 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 ZNF75AQ96N20 296 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 GPER1Q99527 375 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 TMEM59Q9BXS4 323 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 OPN3Q9H1Y3 402 aaPredicted RBP11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 RGCCQ9H4X1 137 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 MBD2Q9UBB5 411 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 SHPKQ9UHJ6 478 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 ANAPC10Q9UM13 185 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 ZNF835Q9Y2P0 537 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 COL6A6A6NMZ7 2263 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 C5orf49A4QMS7 147 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 MPTX1A8MV57 137 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 NUDT19A8MXV4 375 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 CDC14BO60729 498 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 DHRS3O75911 302 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 HCKP08631 526 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 GLI4P10075 376 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 COX5AP20674 150 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 SERPINF1P36955 418 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 NAAAQ02083 359 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 GABRA6Q16445 453 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 SNAI3Q3KNW1 292 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 BPIFCQ8NFQ6 507 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 LRRC46Q96FV0 321 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 GHRLQ9UBU3 117 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 SH3BGRL2Q9UJC5 107 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 POLEQ07864 2286 aa11.35□□□□□ -0.59
SQSTM1-201ENST00000360718 IGLV3-1P01715 115 aa11.34□□□□□ -0.59
SQSTM1-201ENST00000360718 OPRM1P35372 400 aa11.34□□□□□ -0.59
SQSTM1-201ENST00000360718 PNLDC1Q8NA58 520 aaKnown RBP11.34□□□□□ -0.59
SQSTM1-201ENST00000360718 OR5H2Q8NGV7 314 aa11.34□□□□□ -0.59
SQSTM1-201ENST00000360718 OR10Z1Q8NGY1 313 aa11.34□□□□□ -0.59
SQSTM1-201ENST00000360718 STOML3Q8TAV4 291 aa11.34□□□□□ -0.59
SQSTM1-201ENST00000360718 DCUN1D4Q92564 292 aa11.34□□□□□ -0.59
SQSTM1-201ENST00000360718 REEP6Q96HR9 211 aa11.34□□□□□ -0.59
SQSTM1-201ENST00000360718 NARS2Q96I59 477 aaKnown RBP11.34□□□□□ -0.59
SQSTM1-201ENST00000360718 OCSTAMPQ9BR26 566 aa11.34□□□□□ -0.59
SQSTM1-201ENST00000360718 RAB18Q9NP72 206 aa11.34□□□□□ -0.59
SQSTM1-201ENST00000360718 GPR132Q9UNW8 380 aa11.34□□□□□ -0.59
SQSTM1-201ENST00000360718 TRBV6-7A0A0A0MS04 114 aa11.34□□□□□ -0.59
SQSTM1-201ENST00000360718 TEX13DA0A0J9YY54 714 aaPredicted RBP11.34□□□□□ -0.59
SQSTM1-201ENST00000360718 CEACAM18A8MTB9 384 aa11.34□□□□□ -0.59
SQSTM1-201ENST00000360718 XRCC2O43543 280 aa11.34□□□□□ -0.59
SQSTM1-201ENST00000360718 ARFRP1Q13795 201 aa11.34□□□□□ -0.59
SQSTM1-201ENST00000360718 ARL6IP1Q15041 203 aa11.34□□□□□ -0.59
SQSTM1-201ENST00000360718 MICBQ29980 383 aa11.34□□□□□ -0.59
SQSTM1-201ENST00000360718 MDP1Q86V88 176 aa11.34□□□□□ -0.59
SQSTM1-201ENST00000360718 OR5AS1Q8N127 324 aa11.34□□□□□ -0.59
SQSTM1-201ENST00000360718 OR5AP2Q8NGF4 316 aa11.34□□□□□ -0.59
SQSTM1-201ENST00000360718 SGK3Q96BR1 496 aa11.34□□□□□ -0.59
SQSTM1-201ENST00000360718 C10orf35Q96D05 121 aa11.34□□□□□ -0.59
SQSTM1-201ENST00000360718 PIK3IP1Q96FE7 263 aa11.34□□□□□ -0.59
SQSTM1-201ENST00000360718 NICN1Q9BSH3 213 aa11.34□□□□□ -0.59
SQSTM1-201ENST00000360718 C1QTNF5Q9BXJ0 243 aa11.34□□□□□ -0.59
SQSTM1-201ENST00000360718 A0A1W2PR80 420 aa11.33□□□□□ -0.6
SQSTM1-201ENST00000360718 F8VVB4 439 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms