RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 PTHLHP12272 177 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 PSMB2P49721 201 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 ZNF141Q15928 474 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 LYG1Q8N1E2 194 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 ATG101Q9BSB4 218 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 MT-CO3P00414 261 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 MIDNQ504T8 468 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 GPR137Q96N19 417 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 TGIF2Q9GZN2 237 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 LHX9Q9NQ69 397 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 RAB9AP51151 201 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 ETFDHQ16134 617 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 SPRED3Q2MJR0 410 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 OR2T2Q6IF00 324 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 C5orf17Q8NAS9 161 aa8.64□□□□□ -1.03
CUX1-203ENST00000360264 PTBP3O95758 552 aaKnown RBP8.63□□□□□ -1.03
CUX1-203ENST00000360264 IGLV3-25P01717 112 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 M0R143 59 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 SOCS7O14512 581 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 GALNSP34059 522 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 PABPC1L2AQ5JQF8 200 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 COPS9Q8WXC6 57 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 MBPP02686 304 aaPredicted RBP8.63□□□□□ -1.03
CUX1-203ENST00000360264 IL13RA2Q14627 380 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 Q3ZCU0 254 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 FNDC7Q5VTL7 733 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 BET1LQ9NYM9 111 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 CBY3A6NI87 242 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 GPANK1O95872 356 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 MIEN1Q9BRT3 115 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 TMIGD3P0DMS9 266 aaPredicted RBP8.63□□□□□ -1.03
CUX1-203ENST00000360264 OR1L6Q8NGR2 347 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 SLC35B3Q9H1N7 401 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 IL20Q9NYY1 176 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 ZNF273Q14593 569 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 OR10V1Q8NGI7 309 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 CACNG5Q9UF02 275 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 ACTL6AO96019 429 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 SLC38A11Q08AI6 406 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 TMEM183BQ1AE95 376 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 RRN3P1Q2M238 152 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 OR4A4PQ8NGN8 299 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 OR2D2Q9H210 308 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 ZNF528Q3MIS6 628 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 LINC01465Q8N7H1 131 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 ZFP64Q9NPA5 681 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 SERTM1A2A2V5 107 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 CEACAM5P06731 702 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 KIR3DL2P43630 455 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 SKP2Q13309 424 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 SIRT3Q9NTG7 399 aaPredicted RBP8.63□□□□□ -1.03
CUX1-203ENST00000360264 CST4P01036 141 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 RTP5Q14D33 572 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 RNASEKQ6P5S7 137 aaKnown RBP8.63□□□□□ -1.03
CUX1-203ENST00000360264 TMEM38BQ9NVV0 291 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 SLC17A2O00624 439 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 RAG2P55895 527 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 KCNMB1Q16558 191 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 PDZD11Q5EBL8 140 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 RHBDD2Q6NTF9 364 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 MAGT1Q9H0U3 335 aa8.63□□□□□ -1.03
CUX1-203ENST00000360264 GSX1Q9H4S2 264 aaPredicted RBP8.63□□□□□ -1.03
CUX1-203ENST00000360264 HIST1H1BP16401 226 aaKnown RBP8.62□□□□□ -1.03
CUX1-203ENST00000360264 FAM3AP98173 230 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 NFAM1Q8NET5 270 aaPredicted RBP8.62□□□□□ -1.03
CUX1-203ENST00000360264 ANAPC16Q96DE5 110 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 HSD17B10Q99714 261 aaKnown RBP8.62□□□□□ -1.03
CUX1-203ENST00000360264 NRXN3Q9Y4C0 1643 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 PNPP00491 289 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 LPAR6P43657 344 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 PRSS42Q7Z5A4 293 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 TCTEX1D1Q8N7M0 179 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 TMEM191AQ9H0A3 160 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 PAPPAQ13219 1627 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 A0A1W2PS18 150 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 RGS13O14921 159 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 ZNF83P51522 516 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 RPEL1Q2QD12 228 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 DDX60LQ5H9U9 1706 aaKnown RBP8.62□□□□□ -1.03
CUX1-203ENST00000360264 GGNBP1Q5YKI7 109 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 HSD17B13Q7Z5P4 300 aaPredicted RBP8.62□□□□□ -1.03
CUX1-203ENST00000360264 PTP4A1Q93096 173 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 OR10C1Q96KK4 312 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 CST2P09228 141 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 VWA1Q6PCB0 445 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 GPR179Q6PRD1 2367 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 HOXD4P09016 255 aaPredicted RBP8.62□□□□□ -1.03
CUX1-203ENST00000360264 MUC15Q8N387 334 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 OR1L8Q8NGR8 309 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 CCSO14618 274 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 EPPINO95925 133 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 CD226Q15762 336 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 RELL2Q8NC24 303 aaPredicted RBP8.62□□□□□ -1.03
CUX1-203ENST00000360264 TMEM204Q9BSN7 226 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 PRR14Q9BWN1 585 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 FAM74A3Q4VXF1 159 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 BATF2Q8N1L9 274 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 HAND1O96004 215 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 FAHD1Q6P587 224 aa8.62□□□□□ -1.03
CUX1-203ENST00000360264 ANKRD37Q7Z713 158 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms