RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 GDF1P27539 372 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 DUSP3P51452 185 aaPredicted RBP7.44□□□□□ -1.22
RFX3-202ENST00000358730 PCBD1P61457 104 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 HERV-K104P61576 105 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 LIAT1Q6ZQX7 453 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 PPP1R32Q7Z5V6 425 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 SKA3Q8IX90 412 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 ZNF100Q8IYN0 542 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 UBAC2Q8NBM4 344 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 OR11L1Q8NGX0 322 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 SUCNR1Q9BXA5 334 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 IL36GQ9NZH8 169 aa7.44□□□□□ -1.22
RFX3-202ENST00000358730 TMEM265A0A087WTH1 108 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 PHF1O43189 567 aaPredicted RBP7.43□□□□□ -1.22
RFX3-202ENST00000358730 OR7C1O76099 320 aaPredicted RBP7.43□□□□□ -1.22
RFX3-202ENST00000358730 RBM11P57052 281 aaKnown RBP7.43□□□□□ -1.22
RFX3-202ENST00000358730 Q0VFX4 171 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 FAM76BQ5HYJ3 339 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 RIPPLY2Q5TAB7 128 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 FBXW12Q6X9E4 464 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 ZNF611Q8N823 705 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 MOB3AQ96BX8 217 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 BSCL2Q96G97 398 aaPredicted RBP7.43□□□□□ -1.22
RFX3-202ENST00000358730 ZNF845Q96IR2 970 aaPredicted RBP7.43□□□□□ -1.22
RFX3-202ENST00000358730 ADGRG7Q96K78 797 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 GPR35Q9HC97 309 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 FAM212BQ9NTI7 297 aaPredicted RBP7.43□□□□□ -1.22
RFX3-202ENST00000358730 PARPBPQ9NWS1 579 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 STARD10Q9Y365 291 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 ZNF175Q9Y473 711 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 C9JQL5 133 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 CD5P06127 495 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 EDN3P14138 238 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 PRKACAP17612 351 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 AADACP22760 399 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 DUSP1P28562 367 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 ZNF616Q08AN1 781 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 OR8B8Q15620 311 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 AKIRIN2Q53H80 203 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 SLC25A26Q70HW3 274 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 CALHM1Q8IU99 346 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 LGI3Q8N145 548 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 OR52M1Q8NGK5 317 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 KIRREL1Q96J84 757 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 C18orf12Q96KH6 178 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 SYT3Q9BQG1 590 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 DEPPQ9NTK1 212 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 FBXO9Q9UK97 447 aaPredicted RBP7.43□□□□□ -1.22
RFX3-202ENST00000358730 DOCK10Q96BY6 2186 aa7.43□□□□□ -1.22
RFX3-202ENST00000358730 FREM1Q5H8C1 2179 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 BORCS7-ASMTA0A0B4J1R7 106 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 ZNF587BE7ETH6 402 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 H7C1Q1 480 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 NME2P1O60361 137 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 CER1O95813 267 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 TSPAN15O95858 294 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 RFC3P40938 356 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 PPT1P50897 306 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 AKR1D1P51857 326 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 DVL1P1P54792 670 aaPredicted RBP7.42□□□□□ -1.22
RFX3-202ENST00000358730 CLDN15P56746 228 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 MIDNQ504T8 468 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 ACER2Q5QJU3 275 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 MEX3BQ6ZN04 569 aaKnown RBP7.42□□□□□ -1.22
RFX3-202ENST00000358730 Q6ZPA2 131 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 WDR5BQ86VZ2 330 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 LINC00518Q8N0U6 118 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 LRTM2Q8N967 370 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 CCDC71LQ8N9Z2 235 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 GLYATL2Q8WU03 294 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 CPNE4Q96A23 557 aaPredicted RBP7.42□□□□□ -1.22
RFX3-202ENST00000358730 MSI2Q96DH6 328 aaKnown RBP7.42□□□□□ -1.22
RFX3-202ENST00000358730 AKR1E2Q96JD6 320 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 P4HTMQ9NXG6 502 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 TCFL5Q9UL49 500 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 POMT1Q9Y6A1 747 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 GPR137BO60478 399 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 IGHEP01854 428 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 HOXA6P31267 233 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 NPBWR2P48146 333 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 RAB13P51153 203 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 TRIM61Q5EBN2 209 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 IQCF2Q8IXL9 164 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 SLC35G3Q8N808 338 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 RXFP4Q8TDU9 374 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 TECTBQ96PL2 329 aa7.42□□□□□ -1.22
RFX3-202ENST00000358730 PAPOLGQ9BWT3 736 aaKnown RBP7.42□□□□□ -1.22
RFX3-202ENST00000358730 PINLYPA6NC86 204 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 PCP4L1A6NKN8 68 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 FAM157AC9JC47 383 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 ST8SIA3O43173 380 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 CYTIPO60759 359 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 PDGFBP01127 241 aaPredicted RBP7.41□□□□□ -1.22
RFX3-202ENST00000358730 PPYP01298 95 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 HEXAP06865 529 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 MMP7P09237 267 aaPredicted RBP7.41□□□□□ -1.22
RFX3-202ENST00000358730 FUT3P21217 361 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 CCNOP22674 350 aa7.41□□□□□ -1.22
RFX3-202ENST00000358730 RPL35P42766 123 aaKnown RBP7.41□□□□□ -1.22
RFX3-202ENST00000358730 CYB561P49447 251 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms