RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 RRADP55042 308 aa15.36■□□□□ 0.05
RTN4-204ENST00000357732 HERV-K104P61576 105 aa15.36■□□□□ 0.05
RTN4-204ENST00000357732 FABP9Q0Z7S8 132 aa15.36■□□□□ 0.05
RTN4-204ENST00000357732 CHAF1BQ13112 559 aa15.36■□□□□ 0.05
RTN4-204ENST00000357732 SRSF7Q16629 238 aaKnown RBP eCLIP15.36■□□□□ 0.05
RTN4-204ENST00000357732 KRBOX4Q5JUW0 171 aa15.36■□□□□ 0.05
RTN4-204ENST00000357732 MRPL14Q6P1L8 145 aaKnown RBP15.36■□□□□ 0.05
RTN4-204ENST00000357732 SLC22A25Q6T423 547 aa15.36■□□□□ 0.05
RTN4-204ENST00000357732 HIPK2Q9H2X6 1198 aa15.36■□□□□ 0.05
RTN4-204ENST00000357732 A0A1W2PPH5 198 aa15.36■□□□□ 0.05
RTN4-204ENST00000357732 FAM230AA0A1W2PPH8 454 aa15.36■□□□□ 0.05
RTN4-204ENST00000357732 PITX3O75364 302 aa15.36■□□□□ 0.05
RTN4-204ENST00000357732 IFNA17P01571 189 aa15.36■□□□□ 0.05
RTN4-204ENST00000357732 LIFP15018 202 aa15.36■□□□□ 0.05
RTN4-204ENST00000357732 FUT6P51993 359 aa15.36■□□□□ 0.05
RTN4-204ENST00000357732 Q6ZS49 121 aa15.36■□□□□ 0.05
RTN4-204ENST00000357732 OR1F12Q8NHA8 337 aa15.36■□□□□ 0.05
RTN4-204ENST00000357732 BSCL2Q96G97 398 aaPredicted RBP15.36■□□□□ 0.05
RTN4-204ENST00000357732 DUSP23Q9BVJ7 150 aa15.36■□□□□ 0.05
RTN4-204ENST00000357732 OR51M1Q9H341 326 aa15.36■□□□□ 0.05
RTN4-204ENST00000357732 C11orf1Q9H5F2 150 aa15.36■□□□□ 0.05
RTN4-204ENST00000357732 ZMAT5Q9UDW3 170 aaKnown RBP15.36■□□□□ 0.05
RTN4-204ENST00000357732 RCL1Q9Y2P8 373 aaKnown RBP15.36■□□□□ 0.05
RTN4-204ENST00000357732 CEP192Q8TEP8 1941 aa15.36■□□□□ 0.05
RTN4-204ENST00000357732 IGKV1-27A0A075B6S5 117 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 CCDC187A0A096LP49 1063 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 AP4M1O00189 453 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 SPRY1O43609 319 aaPredicted RBP15.35■□□□□ 0.05
RTN4-204ENST00000357732 ANGPTL7O43827 346 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 TCN2P20062 427 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 S100PP25815 95 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 AKR1C3P42330 323 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 RAC1P63000 192 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 EWSR1Q01844 656 aaKnown RBP eCLIP15.35■□□□□ 0.052e-7■■■□□ 18.2
RTN4-204ENST00000357732 MALLQ13021 153 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 PRAMEF20Q5VT98 475 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 PPP1R3BQ86XI6 285 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 OR2C3Q8N628 320 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 ZIC4Q8N9L1 334 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 OR52M1Q8NGK5 317 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 OR14L1PQ8NHC6 308 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 SLC25A31Q9H0C2 315 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 PARP12Q9H0J9 701 aaKnown RBP15.35■□□□□ 0.05
RTN4-204ENST00000357732 FAM90A10PA6NDY2 464 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 FAM90A18PA6NE21 464 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 FAM90A16PA6NEW6 464 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 FAM90A20PA6NIJ5 464 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 FAM90A8PA6NJQ4 464 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 FAM90A7PA6NKC0 464 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 FAM90A22PA8MWA6 464 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 FAM90A12PA8MX19 464 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 FAM90A5PA8MXJ8 464 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 FAM90A23PA8MXZ1 464 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 XRCC2O43543 280 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 NRASP01111 189 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 FAM90A15PP0C7V4 464 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 FAM90A13PP0C7W8 464 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 FAM90A14PP0C7W9 464 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 FAM90A24PP0C7X0 464 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 MMP9P14780 707 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 FXYD4P59646 89 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 EXT1Q16394 746 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 PHLDA2Q53GA4 152 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 OR5L1Q8NGL2 311 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 FAM86C1Q9NVL1 165 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 TCFL5Q9UL49 500 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 SLC7A11Q9UPY5 501 aa15.35■□□□□ 0.05
RTN4-204ENST00000357732 OR6C6A6NF89 314 aa15.34■□□□□ 0.05
RTN4-204ENST00000357732 PHF1O43189 567 aaPredicted RBP15.34■□□□□ 0.05
RTN4-204ENST00000357732 EIF2S3P41091 472 aaKnown RBP15.34■□□□□ 0.05
RTN4-204ENST00000357732 RND3P61587 244 aa15.34■□□□□ 0.05
RTN4-204ENST00000357732 PCOLCEQ15113 449 aa15.34■□□□□ 0.05
RTN4-204ENST00000357732 SOHLH1Q5JUK2 328 aa15.34■□□□□ 0.05
RTN4-204ENST00000357732 RAET1LQ5VY80 246 aa15.34■□□□□ 0.05
RTN4-204ENST00000357732 CPT1CQ8TCG5 803 aa15.34■□□□□ 0.05
RTN4-204ENST00000357732 TMEM56Q96MV1 263 aa15.34■□□□□ 0.05
RTN4-204ENST00000357732 GSN-AS1Q9NRJ2 163 aa15.34■□□□□ 0.05
RTN4-204ENST00000357732 TMEM56-RWDD3S4R434 201 aa15.34■□□□□ 0.05
RTN4-204ENST00000357732 PIGBOS1A0A0B4J2F0 54 aa15.34■□□□□ 0.05
RTN4-204ENST00000357732 GEMIN2O14893 280 aaKnown RBP15.34■□□□□ 0.05
RTN4-204ENST00000357732 HSPA12AO43301 675 aa15.34■□□□□ 0.05
RTN4-204ENST00000357732 NHLH2Q02577 135 aa15.34■□□□□ 0.05
RTN4-204ENST00000357732 HIKESHIQ53FT3 197 aa15.34■□□□□ 0.05
RTN4-204ENST00000357732 GUSBP11Q6P575 273 aa15.34■□□□□ 0.05
RTN4-204ENST00000357732 FBXL14Q8N1E6 418 aa15.34■□□□□ 0.05
RTN4-204ENST00000357732 SLC35G3Q8N808 338 aa15.34■□□□□ 0.05
RTN4-204ENST00000357732 ZNF565Q8N9K5 539 aa15.34■□□□□ 0.05
RTN4-204ENST00000357732 SUMF2Q8NBJ7 301 aa15.34■□□□□ 0.05
RTN4-204ENST00000357732 HSD17B11Q8NBQ5 300 aa15.34■□□□□ 0.05
RTN4-204ENST00000357732 CD300LFQ8TDQ1 290 aa15.34■□□□□ 0.05
RTN4-204ENST00000357732 TMEM222Q9H0R3 208 aa15.34■□□□□ 0.05
RTN4-204ENST00000357732 SH3BGRL3Q9H299 93 aa15.34■□□□□ 0.05
RTN4-204ENST00000357732 TMPRSS5Q9H3S3 457 aa15.34■□□□□ 0.05
RTN4-204ENST00000357732 PLEKHF2Q9H8W4 249 aa15.34■□□□□ 0.05
RTN4-204ENST00000357732 ST3GAL6Q9Y274 331 aa15.34■□□□□ 0.05
RTN4-204ENST00000357732 CFAP54Q96N23 3096 aa15.34■□□□□ 0.05
RTN4-204ENST00000357732 A0A087WWC5 75 aa15.33■□□□□ 0.04
RTN4-204ENST00000357732 C3orf85A0A1B0GTC6 90 aa15.33■□□□□ 0.04
RTN4-204ENST00000357732 TRDCB7Z8K6 153 aa15.33■□□□□ 0.04
RTN4-204ENST00000357732 MPPED1O15442 326 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms