RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 FOXO1Q12778 655 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 RNPS1Q15287 305 aaKnown RBP15.42■□□□□ 0.06
COL27A1-201ENST00000356083 WDR88Q6ZMY6 472 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 ZNF441Q8N8Z8 693 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 SGMS2Q8NHU3 365 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 TNCP24821 2201 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 SRSF5Q13243 272 aaKnown RBP15.42■□□□□ 0.06
COL27A1-201ENST00000356083 SHANK1Q9Y566 2161 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 HMGN4O00479 90 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 SS18L1O75177 396 aaPredicted RBP15.42■□□□□ 0.06
COL27A1-201ENST00000356083 ZNF737O75373 536 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 RANP62826 216 aaKnown RBP15.42■□□□□ 0.06
COL27A1-201ENST00000356083 TM4SF20Q53R12 229 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 NOXO1Q8NFA2 376 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 SLC25A46Q96AG3 418 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 GABRG3Q99928 467 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 KIR3DL2P43630 455 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 IGFBP7Q16270 282 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 PRNTQ86SH4 94 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 ST8SIA1Q92185 356 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 UQCC1Q9NVA1 299 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 LALBAP00709 142 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 PF4P02776 101 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 COL8A1P27658 744 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 LIPAP38571 399 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 LPAR6P43657 344 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 SHISA4Q96DD7 197 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 JAM3Q9BX67 310 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 PARP11Q9NR21 331 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 ZNF629Q9UEG4 869 aaPredicted RBP15.42■□□□□ 0.06
COL27A1-201ENST00000356083 IGKV3-20P01619 116 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 LGALSLQ3ZCW2 172 aaPredicted RBP15.42■□□□□ 0.06
COL27A1-201ENST00000356083 FAM222BQ8WU58 562 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 WDR13Q9H1Z4 485 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 DIMT1Q9UNQ2 313 aaKnown RBP15.42■□□□□ 0.06
COL27A1-201ENST00000356083 AMDHD2Q9Y303 409 aa15.42■□□□□ 0.06
COL27A1-201ENST00000356083 TMEM171Q8WVE6 324 aa15.41■□□□□ 0.06
COL27A1-201ENST00000356083 TOX2Q96NM4 488 aa15.41■□□□□ 0.06
COL27A1-201ENST00000356083 NEURL2Q9BR09 285 aa15.41■□□□□ 0.06
COL27A1-201ENST00000356083 CACFD1Q9UGQ2 172 aa15.41■□□□□ 0.06
COL27A1-201ENST00000356083 HILPDAQ9Y5L2 63 aa15.41■□□□□ 0.06
COL27A1-201ENST00000356083 TRAV38-1A0A0B4J264 116 aa15.41■□□□□ 0.06
COL27A1-201ENST00000356083 HERPUD1Q15011 391 aa15.41■□□□□ 0.06
COL27A1-201ENST00000356083 NUDT10Q8NFP7 164 aa15.41■□□□□ 0.06
COL27A1-201ENST00000356083 NUDT11Q96G61 164 aa15.41■□□□□ 0.06
COL27A1-201ENST00000356083 C2orf50Q96LR7 162 aa15.41■□□□□ 0.06
COL27A1-201ENST00000356083 LTBP3Q9NS15 1303 aa15.41■□□□□ 0.06
COL27A1-201ENST00000356083 CDRT15L2A8MXV6 281 aa15.41■□□□□ 0.06
COL27A1-201ENST00000356083 HYAL3O43820 417 aaPredicted RBP15.41■□□□□ 0.06
COL27A1-201ENST00000356083 CYS1Q717R9 158 aa15.41■□□□□ 0.06
COL27A1-201ENST00000356083 A0A1B0GUL6 1792 aa15.41■□□□□ 0.06
COL27A1-201ENST00000356083 OR2A25A4D2G3 310 aa15.41■□□□□ 0.06
COL27A1-201ENST00000356083 PATE4P0C8F1 98 aa15.41■□□□□ 0.06
COL27A1-201ENST00000356083 TFF2Q03403 129 aa15.41■□□□□ 0.06
COL27A1-201ENST00000356083 RNF212Q495C1 297 aa15.41■□□□□ 0.06
COL27A1-201ENST00000356083 PAQR6Q6TCH4 344 aa15.41■□□□□ 0.06
COL27A1-201ENST00000356083 NEIL1Q96FI4 390 aaPredicted RBP15.41■□□□□ 0.06
COL27A1-201ENST00000356083 C16orf92Q96LL3 132 aa15.41■□□□□ 0.06
COL27A1-201ENST00000356083 PRO1933Q9H354 126 aa15.41■□□□□ 0.06
COL27A1-201ENST00000356083 ZNF256Q9Y2P7 627 aaPredicted RBP15.41■□□□□ 0.06
COL27A1-201ENST00000356083 LOC107984156A0A0G2JMH3 177 aa15.41■□□□□ 0.06
COL27A1-201ENST00000356083 REG1BP48304 166 aa15.41■□□□□ 0.06
COL27A1-201ENST00000356083 C16orf47Q6ZP98 133 aaPredicted RBP15.41■□□□□ 0.06
COL27A1-201ENST00000356083 ARL17AQ8IVW1 177 aa15.41■□□□□ 0.06
COL27A1-201ENST00000356083 SH2D2AQ9NP31 389 aa15.41■□□□□ 0.06
COL27A1-201ENST00000356083 BHLHA15Q7RTS1 189 aaPredicted RBP15.41■□□□□ 0.06
COL27A1-201ENST00000356083 C12orf57Q99622 126 aa15.41■□□□□ 0.06
COL27A1-201ENST00000356083 EMCNQ9ULC0 261 aa15.41■□□□□ 0.06
COL27A1-201ENST00000356083 TMEM189-UBE2V1I3L0A0 370 aa15.4■□□□□ 0.06
COL27A1-201ENST00000356083 EML2O95834 649 aa15.4■□□□□ 0.06
COL27A1-201ENST00000356083 SLC26A10Q8NG04 563 aa15.4■□□□□ 0.06
COL27A1-201ENST00000356083 PGPEP1Q9NXJ5 209 aa15.4■□□□□ 0.06
COL27A1-201ENST00000356083 RAXQ9Y2V3 346 aa15.4■□□□□ 0.06
COL27A1-201ENST00000356083 SYNGR2O43760 224 aa15.4■□□□□ 0.06
COL27A1-201ENST00000356083 SUCLG1P53597 346 aaKnown RBP15.4■□□□□ 0.06
COL27A1-201ENST00000356083 CLLU1Q5K131 121 aa15.4■□□□□ 0.06
COL27A1-201ENST00000356083 LDLRAD1Q5T700 205 aa15.4■□□□□ 0.06
COL27A1-201ENST00000356083 PDLIM5Q96HC4 596 aaKnown RBP15.4■□□□□ 0.06
COL27A1-201ENST00000356083 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.4■□□□□ 0.06
COL27A1-201ENST00000356083 ZNF137PP52743 207 aa15.4■□□□□ 0.06
COL27A1-201ENST00000356083 MOGAT2Q3SYC2 334 aa15.4■□□□□ 0.06
COL27A1-201ENST00000356083 Q8WTZ3 238 aa15.4■□□□□ 0.06
COL27A1-201ENST00000356083 WDR89Q96FK6 387 aaPredicted RBP15.4■□□□□ 0.06
COL27A1-201ENST00000356083 SIGLEC11Q96RL6 698 aa15.4■□□□□ 0.06
COL27A1-201ENST00000356083 KCNK15Q9H427 330 aa15.4■□□□□ 0.06
COL27A1-201ENST00000356083 TMEM183BQ1AE95 376 aa15.4■□□□□ 0.06
COL27A1-201ENST00000356083 TMEM240Q5SV17 173 aa15.4■□□□□ 0.06
COL27A1-201ENST00000356083 DUSP8Q13202 625 aa15.4■□□□□ 0.06
COL27A1-201ENST00000356083 DYRK2Q92630 601 aa15.4■□□□□ 0.06
COL27A1-201ENST00000356083 OR13C6PQ8NH95 151 aa15.39■□□□□ 0.05
COL27A1-201ENST00000356083 ZNF26P17031 533 aaPredicted RBP15.39■□□□□ 0.05
COL27A1-201ENST00000356083 RPL29P47914 159 aaKnown RBP15.39■□□□□ 0.05
COL27A1-201ENST00000356083 NMUP48645 174 aa15.39■□□□□ 0.05
COL27A1-201ENST00000356083 GGTA1PQ4G0N0 100 aa15.39■□□□□ 0.05
COL27A1-201ENST00000356083 Q6ZS52 159 aa15.39■□□□□ 0.05
COL27A1-201ENST00000356083 ZNF485Q8NCK3 441 aa15.39■□□□□ 0.05
COL27A1-201ENST00000356083 LANCL1O43813 399 aa15.39■□□□□ 0.05
COL27A1-201ENST00000356083 HOXC4P09017 264 aaPredicted RBP15.39■□□□□ 0.05
COL27A1-201ENST00000356083 ATF1P18846 271 aa15.39■□□□□ 0.05
COL27A1-201ENST00000356083 DCTDP32321 178 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms