RNA–Protein interactions for RNA: ENST00000355683.9

STRN3-201, Transcript of striatin 3, humanhuman

TSL 1 (best) BASIC

Gene STRN3, Length 3,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-201ENST00000355683 SNAI3Q3KNW1 292 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 PABPC1L2AQ5JQF8 200 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 GGNBP1Q5YKI7 109 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 RABEPKQ7Z6M1 372 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 DTWD2Q8NBA8 298 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 LRFN5Q96NI6 719 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 ENY2Q9NPA8 101 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 ZNF581Q9P0T4 197 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 MIOXQ9UGB7 285 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 LHFPL6Q9Y693 200 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 PCNX3Q9H6A9 2034 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 A0A0J9YW62 118 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 NPIPB9F8W1W9 429 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 IL2RGP31785 369 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 RHBDD2Q6NTF9 364 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 OR6K3Q8NGY3 331 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 FOXB1Q99853 325 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 FRMPD3Q5JV73 1810 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 ANKRD30BLA7E2S9 258 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 ZNF732B4DXR9 585 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 SNRPCP09234 159 aaKnown RBP13.34□□□□□ -0.27
STRN3-201ENST00000355683 RAC2P15153 192 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 CPN1P15169 458 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 NHLH2Q02577 135 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 UNC119Q13432 240 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 OR10D3Q8NH80 312 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 HGDQ93099 445 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 ADAM19Q9H013 955 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 B4GALT7Q9UBV7 327 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 MCTS1Q9ULC4 181 aaKnown RBP13.34□□□□□ -0.27
STRN3-201ENST00000355683 PCDH15Q96QU1 1955 aa13.34□□□□□ -0.27
STRN3-201ENST00000355683 CRHP06850 196 aa13.33□□□□□ -0.27
STRN3-201ENST00000355683 FGF8P55075 233 aaPredicted RBP13.33□□□□□ -0.27
STRN3-201ENST00000355683 TPRX1Q8N7U7 411 aa13.33□□□□□ -0.27
STRN3-201ENST00000355683 SNIP1Q8TAD8 396 aaKnown RBP13.33□□□□□ -0.27
STRN3-201ENST00000355683 PRRX2Q99811 253 aa13.33□□□□□ -0.27
STRN3-201ENST00000355683 CDH20Q9HBT6 801 aa13.33□□□□□ -0.27
STRN3-201ENST00000355683 CACNA1AO00555 2505 aa13.33□□□□□ -0.28
STRN3-201ENST00000355683 FRYLO94915 3013 aa13.33□□□□□ -0.28
STRN3-201ENST00000355683 DXOO77932 396 aaKnown RBP13.33□□□□□ -0.28
STRN3-201ENST00000355683 NXPH2O95156 264 aa13.33□□□□□ -0.28
STRN3-201ENST00000355683 EIF1P41567 113 aaKnown RBP13.33□□□□□ -0.28
STRN3-201ENST00000355683 EMG1Q92979 244 aaKnown RBP13.33□□□□□ -0.28
STRN3-201ENST00000355683 ZNF426Q9BUY5 554 aa13.33□□□□□ -0.28
STRN3-201ENST00000355683 STRADBQ9C0K7 418 aa13.33□□□□□ -0.28
STRN3-201ENST00000355683 NECAP2Q9NVZ3 263 aa13.33□□□□□ -0.28
STRN3-201ENST00000355683 AURKAIP1Q9NWT8 199 aaPredicted RBP13.33□□□□□ -0.28
STRN3-201ENST00000355683 KCNIP1Q9NZI2 227 aa13.33□□□□□ -0.28
STRN3-201ENST00000355683 LHX6Q9UPM6 363 aa13.33□□□□□ -0.28
STRN3-201ENST00000355683 PLXNA4Q9HCM2 1894 aa13.33□□□□□ -0.28
STRN3-201ENST00000355683 TRBV5-5A0A0J9YX44 114 aa13.33□□□□□ -0.28
STRN3-201ENST00000355683 ZNF727A8MUV8 499 aa13.33□□□□□ -0.28
STRN3-201ENST00000355683 CA6P23280 308 aa13.33□□□□□ -0.28
STRN3-201ENST00000355683 STARD6P59095 220 aa13.33□□□□□ -0.28
STRN3-201ENST00000355683 GRB2P62993 217 aaKnown RBP13.33□□□□□ -0.28
STRN3-201ENST00000355683 ZNF266Q14584 549 aa13.33□□□□□ -0.28
STRN3-201ENST00000355683 ZNF528Q3MIS6 628 aa13.33□□□□□ -0.28
STRN3-201ENST00000355683 AWAT1Q58HT5 328 aa13.33□□□□□ -0.28
STRN3-201ENST00000355683 FAM209BQ5JX69 171 aa13.33□□□□□ -0.28
STRN3-201ENST00000355683 D2HGDHQ8N465 521 aa13.33□□□□□ -0.28
STRN3-201ENST00000355683 ZNF561Q8N587 486 aa13.33□□□□□ -0.28
STRN3-201ENST00000355683 PLEKHA3Q9HB20 300 aa13.33□□□□□ -0.28
STRN3-201ENST00000355683 IGHV3-43A0A0B4J1X8 118 aa13.32□□□□□ -0.28
STRN3-201ENST00000355683 IGHV3-43DP0DP04 118 aa13.32□□□□□ -0.28
STRN3-201ENST00000355683 BAXQ07812 192 aa13.32□□□□□ -0.28
STRN3-201ENST00000355683 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.32□□□□□ -0.28
STRN3-201ENST00000355683 UNQ9370/PRO34162Q6UXP9 181 aa13.32□□□□□ -0.28
STRN3-201ENST00000355683 CA5BP1Q8WTZ4 195 aa13.32□□□□□ -0.28
STRN3-201ENST00000355683 RNF133Q8WVZ7 376 aa13.32□□□□□ -0.28
STRN3-201ENST00000355683 TMEM37Q8WXS4 190 aa13.32□□□□□ -0.28
STRN3-201ENST00000355683 SCARF2Q96GP6 870 aaPredicted RBP13.32□□□□□ -0.28
STRN3-201ENST00000355683 CABLES2Q9BTV7 478 aa13.32□□□□□ -0.28
STRN3-201ENST00000355683 LPAR5Q9H1C0 372 aa13.32□□□□□ -0.28
STRN3-201ENST00000355683 MFSD2BA6NFX1 497 aa13.32□□□□□ -0.28
STRN3-201ENST00000355683 KRASP01116 189 aa13.32□□□□□ -0.28
STRN3-201ENST00000355683 IGKV3-11P04433 115 aa13.32□□□□□ -0.28
STRN3-201ENST00000355683 EDDM3BP56851 147 aa13.32□□□□□ -0.28
STRN3-201ENST00000355683 SRSF3P84103 164 aaKnown RBP13.32□□□□□ -0.28
STRN3-201ENST00000355683 TMEM267Q0VDI3 215 aaPredicted RBP13.32□□□□□ -0.28
STRN3-201ENST00000355683 ZSCAN4Q8NAM6 433 aaPredicted RBP13.32□□□□□ -0.28
STRN3-201ENST00000355683 OR1K1Q8NGR3 316 aa13.32□□□□□ -0.28
STRN3-201ENST00000355683 SHARPINQ9H0F6 387 aa13.32□□□□□ -0.28
STRN3-201ENST00000355683 COL6A3P12111 3177 aa13.32□□□□□ -0.28
STRN3-201ENST00000355683 TUBAL3A6NHL2 446 aa13.32□□□□□ -0.28
STRN3-201ENST00000355683 ATXN7O15265 892 aaPredicted RBP13.32□□□□□ -0.28
STRN3-201ENST00000355683 RUNX1Q01196 453 aa13.32□□□□□ -0.28
STRN3-201ENST00000355683 GGTLC2Q14390 218 aa13.32□□□□□ -0.28
STRN3-201ENST00000355683 ANKRD55Q3KP44 614 aa13.32□□□□□ -0.28
STRN3-201ENST00000355683 ATP1A1-AS1Q5TC04 95 aa13.32□□□□□ -0.28
STRN3-201ENST00000355683 UTP23Q9BRU9 249 aaKnown RBP13.32□□□□□ -0.28
STRN3-201ENST00000355683 GP1BAP07359 652 aa13.31□□□□□ -0.28
STRN3-201ENST00000355683 HOXC4P09017 264 aaPredicted RBP13.31□□□□□ -0.28
STRN3-201ENST00000355683 RAB1AP62820 205 aa13.31□□□□□ -0.28
STRN3-201ENST00000355683 TLE4Q04727 773 aa13.31□□□□□ -0.28
STRN3-201ENST00000355683 DHRS7CA6NNS2 312 aa13.31□□□□□ -0.28
STRN3-201ENST00000355683 B2MP61769 119 aa13.31□□□□□ -0.28
STRN3-201ENST00000355683 ZNF574Q6ZN55 896 aaPredicted RBP13.31□□□□□ -0.28
STRN3-201ENST00000355683 FGF11Q92914 225 aa13.31□□□□□ -0.28
STRN3-201ENST00000355683 TOLLIPQ9H0E2 274 aa13.31□□□□□ -0.28
STRN3-201ENST00000355683 RFNGQ9Y644 331 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms