RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 DAZAP2Q15038 168 aaPredicted RBP13.19□□□□□ -0.3
CTSA-202ENST00000354880 PDCD1Q15116 288 aa13.19□□□□□ -0.3
CTSA-202ENST00000354880 MPV17LQ2QL34 196 aa13.19□□□□□ -0.3
CTSA-202ENST00000354880 OLFML2AQ68BL7 652 aa13.19□□□□□ -0.3
CTSA-202ENST00000354880 C6orf201Q7Z4U5 140 aa13.19□□□□□ -0.3
CTSA-202ENST00000354880 LINC00596Q86U02 117 aa13.19□□□□□ -0.3
CTSA-202ENST00000354880 NUDCD2Q8WVJ2 157 aa13.19□□□□□ -0.3
CTSA-202ENST00000354880 ST8SIA4Q92187 359 aa13.19□□□□□ -0.3
CTSA-202ENST00000354880 SPTAN1Q13813 2472 aaKnown RBP13.19□□□□□ -0.3
CTSA-202ENST00000354880 LYRM1O43325 122 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 PDCD6O75340 191 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 ECDO95905 644 aaPredicted RBP13.18□□□□□ -0.3
CTSA-202ENST00000354880 FUT3P21217 361 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 AP3S2P59780 193 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 ACTBP60709 375 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 GMFBP60983 142 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 ACTG1P63261 375 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 OXA1LQ15070 435 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 TRIM16LQ309B1 348 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 SPRNQ5BIV9 151 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 TRAPPC6BQ86SZ2 158 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 MUC15Q8N387 334 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 COX4I2Q96KJ9 171 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 FN3KRPQ9HA64 309 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 HES4Q9HCC6 221 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 ANKRD20A5PA0PJZ0 165 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 C3orf80F5H4A9 247 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 CD55P08174 381 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 CFHR2P36980 270 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 DYRK1AQ13627 763 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 ARFRP1Q13795 201 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 KLF9Q13886 244 aaPredicted RBP13.18□□□□□ -0.3
CTSA-202ENST00000354880 MST1LQ2TV78 715 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 PCGF3Q3KNV8 242 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 FAM209AQ5JX71 171 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 ATAD3CQ5T2N8 411 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 DCDC5Q6ZRR9 648 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 MOGAT3Q86VF5 341 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 CENPSQ8N2Z9 138 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 MINDY2Q8NBR6 621 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 OR10Z1Q8NGY1 313 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 CYYR1Q96J86 154 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 MS4A5Q9H3V2 200 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 OCEL1Q9H607 264 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 DYNLRB1Q9NP97 96 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 TAS2R8Q9NYW2 309 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 ARFGEF3Q5TH69 2177 aa13.18□□□□□ -0.3
CTSA-202ENST00000354880 H3BUI4 141 aa13.17□□□□□ -0.3
CTSA-202ENST00000354880 TPD52L2O43399 206 aaKnown RBP13.17□□□□□ -0.3
CTSA-202ENST00000354880 SSX5O60225 188 aa13.17□□□□□ -0.3
CTSA-202ENST00000354880 CA11O75493 328 aa13.17□□□□□ -0.3
CTSA-202ENST00000354880 RNF224P0DH78 156 aa13.17□□□□□ -0.3
CTSA-202ENST00000354880 GLRA1P23415 457 aa13.17□□□□□ -0.3
CTSA-202ENST00000354880 DUSP1P28562 367 aa13.17□□□□□ -0.3
CTSA-202ENST00000354880 CCL8P80075 99 aa13.17□□□□□ -0.3
CTSA-202ENST00000354880 IKZF1Q13422 519 aa13.17□□□□□ -0.3
CTSA-202ENST00000354880 MZT2BQ6NZ67 158 aa13.17□□□□□ -0.3
CTSA-202ENST00000354880 FIP1L1Q6UN15 594 aaKnown RBP13.17□□□□□ -0.3
CTSA-202ENST00000354880 ZCCHC24Q8N2G6 241 aaKnown RBP13.17□□□□□ -0.3
CTSA-202ENST00000354880 LRRC29Q8WV35 223 aa13.17□□□□□ -0.3
CTSA-202ENST00000354880 ERGIC1Q969X5 290 aa13.17□□□□□ -0.3
CTSA-202ENST00000354880 FAAP24Q9BTP7 215 aa13.17□□□□□ -0.3
CTSA-202ENST00000354880 WDR13Q9H1Z4 485 aa13.17□□□□□ -0.3
CTSA-202ENST00000354880 GCM1Q9NP62 436 aa13.17□□□□□ -0.3
CTSA-202ENST00000354880 CACNG2Q9Y698 323 aa13.17□□□□□ -0.3
CTSA-202ENST00000354880 CENPXA8MT69 81 aa13.16□□□□□ -0.3
CTSA-202ENST00000354880 WNT9BO14905 357 aa13.16□□□□□ -0.3
CTSA-202ENST00000354880 CSF1P09603 554 aa13.16□□□□□ -0.3
CTSA-202ENST00000354880 TNFRSF1AP19438 455 aa13.16□□□□□ -0.3
CTSA-202ENST00000354880 ZNF146Q15072 292 aa13.16□□□□□ -0.3
CTSA-202ENST00000354880 TESK1Q15569 626 aa13.16□□□□□ -0.3
CTSA-202ENST00000354880 SWI5Q1ZZU3 235 aa13.16□□□□□ -0.3
CTSA-202ENST00000354880 SPIN3Q5JUX0 258 aa13.16□□□□□ -0.3
CTSA-202ENST00000354880 BRICD5Q6PL45 260 aa13.16□□□□□ -0.3
CTSA-202ENST00000354880 GDPD3Q7L5L3 318 aa13.16□□□□□ -0.3
CTSA-202ENST00000354880 NRARPQ7Z6K4 114 aa13.16□□□□□ -0.3
CTSA-202ENST00000354880 FBXW5Q969U6 566 aa13.16□□□□□ -0.3
CTSA-202ENST00000354880 SULT4A1Q9BR01 284 aa13.16□□□□□ -0.3
CTSA-202ENST00000354880 SPACA1Q9HBV2 294 aa13.16□□□□□ -0.3
CTSA-202ENST00000354880 RCC2Q9P258 522 aaKnown RBP13.16□□□□□ -0.3
CTSA-202ENST00000354880 RALYQ9UKM9 306 aaKnown RBP13.16□□□□□ -0.3
CTSA-202ENST00000354880 KLF2Q9Y5W3 355 aaPredicted RBP13.16□□□□□ -0.3
CTSA-202ENST00000354880 DCHS2Q6V1P9 2916 aa13.16□□□□□ -0.3
CTSA-202ENST00000354880 SRRM5B3KS81 715 aa13.16□□□□□ -0.3
CTSA-202ENST00000354880 PMELP40967 661 aa13.16□□□□□ -0.3
CTSA-202ENST00000354880 RFX2P48378 723 aa13.16□□□□□ -0.3
CTSA-202ENST00000354880 MEX3BQ6ZN04 569 aaKnown RBP13.16□□□□□ -0.3
CTSA-202ENST00000354880 ACP7Q6ZNF0 438 aa13.16□□□□□ -0.3
CTSA-202ENST00000354880 GVQW1Q8N7I0 195 aa13.16□□□□□ -0.3
CTSA-202ENST00000354880 DEDD2Q8WXF8 326 aa13.16□□□□□ -0.3
CTSA-202ENST00000354880 C7orf50Q9BRJ6 194 aaKnown RBP13.16□□□□□ -0.3
CTSA-202ENST00000354880 EGLN1Q9GZT9 426 aa13.16□□□□□ -0.3
CTSA-202ENST00000354880 IFT22Q9H7X7 185 aa13.16□□□□□ -0.3
CTSA-202ENST00000354880 IFT46Q9NQC8 304 aa13.16□□□□□ -0.3
CTSA-202ENST00000354880 DECR2Q9NUI1 292 aa13.16□□□□□ -0.3
CTSA-202ENST00000354880 SSX4O60224 188 aa13.15□□□□□ -0.3
CTSA-202ENST00000354880 FCER2P06734 321 aa13.15□□□□□ -0.3
CTSA-202ENST00000354880 RCVRNP35243 200 aa13.15□□□□□ -0.3
CTSA-202ENST00000354880 CBX5P45973 191 aa13.15□□□□□ -0.3
CTSA-202ENST00000354880 SNRPD2P62316 118 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms