RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 LOC105371242A0A075B767 164 aa9.86□□□□□ -0.83
SNCA-202ENST00000345009 TRAV1-2A0A0B4J238 106 aa9.86□□□□□ -0.83
SNCA-202ENST00000345009 A8MV72 311 aaPredicted RBP9.86□□□□□ -0.83
SNCA-202ENST00000345009 FAM157AC9JC47 383 aa9.86□□□□□ -0.83
SNCA-202ENST00000345009 H3BUI4 141 aa9.86□□□□□ -0.83
SNCA-202ENST00000345009 DVL1O14640 695 aa9.86□□□□□ -0.83
SNCA-202ENST00000345009 SIGLEC5O15389 551 aa9.86□□□□□ -0.83
SNCA-202ENST00000345009 LIPFP07098 398 aa9.86□□□□□ -0.83
SNCA-202ENST00000345009 UBBP0CG47 229 aa9.86□□□□□ -0.83
SNCA-202ENST00000345009 CD36P16671 472 aa9.86□□□□□ -0.83
SNCA-202ENST00000345009 JUNBP17275 347 aaPredicted RBP9.86□□□□□ -0.83
SNCA-202ENST00000345009 PRKACAP17612 351 aa9.86□□□□□ -0.83
SNCA-202ENST00000345009 CR1P17927 2039 aa9.86□□□□□ -0.83
SNCA-202ENST00000345009 BCL3P20749 454 aa9.86□□□□□ -0.83
SNCA-202ENST00000345009 FGF9P31371 208 aaPredicted RBP9.86□□□□□ -0.83
SNCA-202ENST00000345009 RBMXP38159 391 aaKnown RBP9.86□□□□□ -0.83
SNCA-202ENST00000345009 CAPZA1P52907 286 aa9.86□□□□□ -0.83
SNCA-202ENST00000345009 FAM27D1Q5T7N8 215 aa9.86□□□□□ -0.83
SNCA-202ENST00000345009 WDR25Q64LD2 544 aaPredicted RBP9.86□□□□□ -0.83
SNCA-202ENST00000345009 ELP2Q6IA86 826 aa9.86□□□□□ -0.83
SNCA-202ENST00000345009 LYPD2Q6UXB3 125 aa9.86□□□□□ -0.83
SNCA-202ENST00000345009 GDPGP1Q6ZNW5 385 aa9.86□□□□□ -0.83
SNCA-202ENST00000345009 ZNF788Q6ZQV5 615 aa9.86□□□□□ -0.83
SNCA-202ENST00000345009 OR5D13Q8NGL4 314 aa9.86□□□□□ -0.83
SNCA-202ENST00000345009 TBC1D15Q8TC07 691 aa9.86□□□□□ -0.83
SNCA-202ENST00000345009 SEH1LQ96EE3 360 aa9.86□□□□□ -0.83
SNCA-202ENST00000345009 SDSLQ96GA7 329 aa9.86□□□□□ -0.83
SNCA-202ENST00000345009 MRPS26Q9BYN8 205 aaKnown RBP9.86□□□□□ -0.83
SNCA-202ENST00000345009 LPAR2Q9HBW0 351 aa9.86□□□□□ -0.83
SNCA-202ENST00000345009 HMG20AQ9NP66 347 aa9.86□□□□□ -0.83
SNCA-202ENST00000345009 RBFOX1Q9NWB1 397 aaKnown RBP9.86□□□□□ -0.83
SNCA-202ENST00000345009 IL36GQ9NZH8 169 aa9.86□□□□□ -0.83
SNCA-202ENST00000345009 MRPS28Q9Y2Q9 187 aaKnown RBP9.86□□□□□ -0.83
SNCA-202ENST00000345009 POLR3KQ9Y2Y1 108 aaPredicted RBP9.86□□□□□ -0.83
SNCA-202ENST00000345009 YLPM1P49750 1951 aaKnown RBP9.86□□□□□ -0.83
SNCA-202ENST00000345009 ZNF469Q96JG9 3925 aaPredicted RBP9.85□□□□□ -0.83
SNCA-202ENST00000345009 IGKV1D-17A0A075B6S4 117 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 A8MXK9 166 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 J3QLI3 93 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 PHF1O43189 567 aaPredicted RBP9.85□□□□□ -0.83
SNCA-202ENST00000345009 ENSAO43768 121 aaKnown RBP9.85□□□□□ -0.83
SNCA-202ENST00000345009 HTR3BO95264 441 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 GTF2F2P13984 249 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 NDUFB7P17568 137 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 HNF1AP20823 631 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 OR3A4PP47883 348 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 NPBWR2P48146 333 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 CAV3P56539 151 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 FGF12P61328 243 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 HOXA4Q00056 320 aaPredicted RBP9.85□□□□□ -0.83
SNCA-202ENST00000345009 IKZF1Q13422 519 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 ZNF146Q15072 292 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 SLC22A6Q4U2R8 563 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 DCAF12L2Q5VW00 463 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 AWAT2Q6E213 333 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 FAHD2BQ6P2I3 314 aaPredicted RBP9.85□□□□□ -0.83
SNCA-202ENST00000345009 ASCL4Q6XD76 172 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 BATF2Q8N1L9 274 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 CHST4Q8NCG5 386 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 TMEM185AQ8NFB2 350 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 ST8SIA4Q92187 359 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 MRPS24Q96EL2 167 aaKnown RBP9.85□□□□□ -0.83
SNCA-202ENST00000345009 FAHD2AQ96GK7 314 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 DMRTB1Q96MA1 342 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 KCTD7Q96MP8 289 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 SMR3AQ99954 134 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 FAM234AQ9H0X4 552 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 CST11Q9H112 138 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 CNTD2Q9H8S5 307 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 PLGRKTQ9HBL7 147 aa9.85□□□□□ -0.83
SNCA-202ENST00000345009 SLC25A10Q9UBX3 287 aaPredicted RBP9.85□□□□□ -0.83
SNCA-202ENST00000345009 IGKV1-12A0A0C4DH73 117 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 LOC100506127A0A0U1RQW1 187 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 A0A1W2PPH5 198 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 FUOMA2VDF0 154 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 TRIM64CA6NLI5 447 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 F8VVB4 439 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 F8VWA3 439 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 DEGS1O15121 323 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 CDRT1O95170 752 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 HAND1O96004 215 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 IGKV1D-12P01611 117 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 SFTPBP07988 381 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 ZNF16P17020 682 aaPredicted RBP9.84□□□□□ -0.83
SNCA-202ENST00000345009 ZFP36P26651 326 aaKnown RBP9.84□□□□□ -0.83
SNCA-202ENST00000345009 HTR2CP28335 458 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 GP2P55259 537 aaKnown RBP9.84□□□□□ -0.83
SNCA-202ENST00000345009 C22orf42Q6IC83 251 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 GLIPR1L1Q6UWM5 242 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 ZNF841Q6ZN19 808 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 LINC00596Q86U02 117 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 LRRTM1Q86UE6 522 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 TPRA1Q86W33 373 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 OSR2Q8N2R0 312 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 FAM216BQ8N7L0 139 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 ASCC1Q8N9N2 400 aaKnown RBP9.84□□□□□ -0.83
SNCA-202ENST00000345009 Q8NFD4 153 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 OR6M1Q8NGM8 313 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 RAB40AQ8WXH6 277 aa9.84□□□□□ -0.83
SNCA-202ENST00000345009 GAFA1Q96PS6 74 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms