RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 LHFPL2Q6ZUX7 228 aa11.76□□□□□ -0.53
HMGN3-202ENST00000344726 TCF23Q7RTU1 214 aa11.76□□□□□ -0.53
HMGN3-202ENST00000344726 OR5D13Q8NGL4 314 aa11.76□□□□□ -0.53
HMGN3-202ENST00000344726 CYGBQ8WWM9 190 aa11.76□□□□□ -0.53
HMGN3-202ENST00000344726 RGP1Q92546 391 aaPredicted RBP11.76□□□□□ -0.53
HMGN3-202ENST00000344726 SPSB1Q96BD6 273 aa11.76□□□□□ -0.53
HMGN3-202ENST00000344726 ZNF696Q9H7X3 374 aa11.76□□□□□ -0.53
HMGN3-202ENST00000344726 FAM96BQ9Y3D0 163 aa11.76□□□□□ -0.53
HMGN3-202ENST00000344726 TMEM212A6NML5 194 aa11.75□□□□□ -0.53
HMGN3-202ENST00000344726 HAND1O96004 215 aa11.75□□□□□ -0.53
HMGN3-202ENST00000344726 MT-ND2P03891 347 aa11.75□□□□□ -0.53
HMGN3-202ENST00000344726 PAX6P26367 422 aa11.75□□□□□ -0.53
HMGN3-202ENST00000344726 SNU13P55769 128 aaKnown RBP11.75□□□□□ -0.53
HMGN3-202ENST00000344726 OR2G6Q5TZ20 316 aa11.75□□□□□ -0.53
HMGN3-202ENST00000344726 ASPHD2Q6ICH7 369 aa11.75□□□□□ -0.53
HMGN3-202ENST00000344726 FAM58AQ8N1B3 248 aa11.75□□□□□ -0.53
HMGN3-202ENST00000344726 PACRGLQ8N7B6 248 aa11.75□□□□□ -0.53
HMGN3-202ENST00000344726 OR52N4Q8NGI2 321 aa11.75□□□□□ -0.53
HMGN3-202ENST00000344726 OR5D18Q8NGL1 313 aa11.75□□□□□ -0.53
HMGN3-202ENST00000344726 OR5AK2Q8NH90 309 aa11.75□□□□□ -0.53
HMGN3-202ENST00000344726 DYRK2Q92630 601 aa11.75□□□□□ -0.53
HMGN3-202ENST00000344726 MYCBPQ99417 103 aaPredicted RBP11.75□□□□□ -0.53
HMGN3-202ENST00000344726 SLITRK2Q9H156 845 aa11.75□□□□□ -0.53
HMGN3-202ENST00000344726 ZCCHC4Q9H5U6 513 aa11.75□□□□□ -0.53
HMGN3-202ENST00000344726 SEBOXQ9HB31 216 aaPredicted RBP11.75□□□□□ -0.53
HMGN3-202ENST00000344726 C17orf98A8MV24 154 aa11.74□□□□□ -0.53
HMGN3-202ENST00000344726 PSPNO60542 156 aa11.74□□□□□ -0.53
HMGN3-202ENST00000344726 PRKACAP17612 351 aa11.74□□□□□ -0.53
HMGN3-202ENST00000344726 BMXP51813 675 aa11.74□□□□□ -0.53
HMGN3-202ENST00000344726 GBX2P52951 348 aaPredicted RBP11.74□□□□□ -0.53
HMGN3-202ENST00000344726 EDDM3BP56851 147 aa11.74□□□□□ -0.53
HMGN3-202ENST00000344726 ACSM1Q08AH1 577 aa11.74□□□□□ -0.53
HMGN3-202ENST00000344726 MRPL28Q13084 256 aaKnown RBP11.74□□□□□ -0.53
HMGN3-202ENST00000344726 ZNF146Q15072 292 aa11.74□□□□□ -0.53
HMGN3-202ENST00000344726 ZNF782Q6ZMW2 699 aaPredicted RBP11.74□□□□□ -0.53
HMGN3-202ENST00000344726 Q8IYB0 196 aa11.74□□□□□ -0.53
HMGN3-202ENST00000344726 OR8H2Q8N162 312 aa11.74□□□□□ -0.53
HMGN3-202ENST00000344726 PARP16Q8N5Y8 322 aa11.74□□□□□ -0.53
HMGN3-202ENST00000344726 TPRX1Q8N7U7 411 aa11.74□□□□□ -0.53
HMGN3-202ENST00000344726 RPS4Y2Q8TD47 263 aa11.74□□□□□ -0.53
HMGN3-202ENST00000344726 SNX22Q96L94 193 aa11.74□□□□□ -0.53
HMGN3-202ENST00000344726 CHST6Q9GZX3 395 aa11.74□□□□□ -0.53
HMGN3-202ENST00000344726 HMG20AQ9NP66 347 aa11.74□□□□□ -0.53
HMGN3-202ENST00000344726 CLEC2DQ9UHP7 191 aa11.74□□□□□ -0.53
HMGN3-202ENST00000344726 CAB39Q9Y376 341 aaPredicted RBP11.74□□□□□ -0.53
HMGN3-202ENST00000344726 SF3B6Q9Y3B4 125 aaKnown RBP11.74□□□□□ -0.53
HMGN3-202ENST00000344726 SIRT4Q9Y6E7 314 aaPredicted RBP11.74□□□□□ -0.53
HMGN3-202ENST00000344726 WIPF1O43516 503 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 KDM4BO94953 1096 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 CYB5AP00167 134 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 LALBAP00709 142 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 CRYBA1P05813 215 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 GNAO1P09471 354 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 CCDC159P0C7I6 412 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 COX7A1P24310 79 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 DCKP27707 260 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 ZP1P60852 638 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 IL18R1Q13478 541 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 EDDM3AQ14507 147 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 CDK5R1Q15078 307 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 MIDNQ504T8 468 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 OGFRL1Q5TC84 451 aaPredicted RBP11.73□□□□□ -0.53
HMGN3-202ENST00000344726 TTC23Q5W5X9 447 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 OLFML2AQ68BL7 652 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 LAIR2Q6ISS4 152 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 GDPD3Q7L5L3 318 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 SERPINA12Q8IW75 414 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 DHRSXQ8N5I4 330 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 BEND2Q8NDZ0 799 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 OR4S1Q8NGB4 309 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 OR4F5Q8NH21 305 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 LINC01006Q8NI28 216 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 TSEN15Q8WW01 171 aaKnown RBP11.73□□□□□ -0.53
HMGN3-202ENST00000344726 COMMD4Q9H0A8 199 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 DPAGT1Q9H3H5 408 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 BEX1Q9HBH7 125 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 VPREB3Q9UKI3 123 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 DIMT1Q9UNQ2 313 aaKnown RBP11.73□□□□□ -0.53
HMGN3-202ENST00000344726 DHDHQ9UQ10 334 aa11.73□□□□□ -0.53
HMGN3-202ENST00000344726 A0A1W2PPH5 198 aa11.72□□□□□ -0.53
HMGN3-202ENST00000344726 CLPSL1A2RUU4 121 aa11.72□□□□□ -0.53
HMGN3-202ENST00000344726 MEGF11A6BM72 1044 aa11.72□□□□□ -0.53
HMGN3-202ENST00000344726 CASQ2O14958 399 aaPredicted RBP11.72□□□□□ -0.53
HMGN3-202ENST00000344726 SULT1B1O43704 296 aa11.72□□□□□ -0.53
HMGN3-202ENST00000344726 ALX3O95076 343 aa11.72□□□□□ -0.53
HMGN3-202ENST00000344726 PAHP00439 452 aa11.72□□□□□ -0.53
HMGN3-202ENST00000344726 OCM2P0CE71 109 aa11.72□□□□□ -0.53
HMGN3-202ENST00000344726 OCMP0CE72 109 aaPredicted RBP11.72□□□□□ -0.53
HMGN3-202ENST00000344726 ZNF728P0DKX0 622 aa11.72□□□□□ -0.53
HMGN3-202ENST00000344726 GABRR1P24046 479 aa11.72□□□□□ -0.53
HMGN3-202ENST00000344726 OR3A1P47881 315 aa11.72□□□□□ -0.53
HMGN3-202ENST00000344726 SOX2P48431 317 aa11.72□□□□□ -0.53
HMGN3-202ENST00000344726 RPL15P61313 204 aaKnown RBP11.72□□□□□ -0.53
HMGN3-202ENST00000344726 KISS1Q15726 138 aa11.72□□□□□ -0.53
HMGN3-202ENST00000344726 GRK1Q15835 563 aa11.72□□□□□ -0.53
HMGN3-202ENST00000344726 SPIN3Q5JUX0 258 aa11.72□□□□□ -0.53
HMGN3-202ENST00000344726 ZNF529Q6P280 563 aa11.72□□□□□ -0.53
HMGN3-202ENST00000344726 Q6ZSV7 163 aa11.72□□□□□ -0.53
HMGN3-202ENST00000344726 OR51A2Q8NGJ7 313 aa11.72□□□□□ -0.53
HMGN3-202ENST00000344726 OR5D14Q8NGL3 314 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms