RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 HACD4Q5VWC8 232 aa13.79□□□□□ -0.2
CEACAM1-202ENST00000344391 OLFML2AQ68BL7 652 aa13.79□□□□□ -0.2
CEACAM1-202ENST00000344391 C6orf201Q7Z4U5 140 aa13.79□□□□□ -0.2
CEACAM1-202ENST00000344391 LINC00596Q86U02 117 aa13.79□□□□□ -0.2
CEACAM1-202ENST00000344391 C19orf18Q8NEA5 215 aa13.79□□□□□ -0.2
CEACAM1-202ENST00000344391 LRRC29Q8WV35 223 aa13.79□□□□□ -0.2
CEACAM1-202ENST00000344391 ST8SIA4Q92187 359 aa13.79□□□□□ -0.2
CEACAM1-202ENST00000344391 SPOCK3Q9BQ16 436 aa13.79□□□□□ -0.2
CEACAM1-202ENST00000344391 GCM1Q9NP62 436 aa13.79□□□□□ -0.2
CEACAM1-202ENST00000344391 KLK11Q9UBX7 282 aa13.79□□□□□ -0.2
CEACAM1-202ENST00000344391 TBC1D24Q9ULP9 559 aa13.79□□□□□ -0.2
CEACAM1-202ENST00000344391 UTP20O75691 2785 aaKnown RBP13.78□□□□□ -0.2
CEACAM1-202ENST00000344391 CLEC18AA5D8T8 446 aa13.78□□□□□ -0.2
CEACAM1-202ENST00000344391 H7C417 338 aa13.78□□□□□ -0.2
CEACAM1-202ENST00000344391 HS3ST1O14792 307 aa13.78□□□□□ -0.2
CEACAM1-202ENST00000344391 PDCD6O75340 191 aa13.78□□□□□ -0.2
CEACAM1-202ENST00000344391 OR7C1O76099 320 aaPredicted RBP13.78□□□□□ -0.2
CEACAM1-202ENST00000344391 GOSR1O95249 250 aa13.78□□□□□ -0.2
CEACAM1-202ENST00000344391 TNFRSF1AP19438 455 aa13.78□□□□□ -0.2
CEACAM1-202ENST00000344391 GDNFP39905 211 aa13.78□□□□□ -0.2
CEACAM1-202ENST00000344391 SNRPD2P62316 118 aaKnown RBP13.78□□□□□ -0.2
CEACAM1-202ENST00000344391 CCL8P80075 99 aa13.78□□□□□ -0.2
CEACAM1-202ENST00000344391 TESK1Q15569 626 aa13.78□□□□□ -0.2
CEACAM1-202ENST00000344391 PNLIPRP3Q17RR3 467 aa13.78□□□□□ -0.2
CEACAM1-202ENST00000344391 NKAPLQ5M9Q1 402 aa13.78□□□□□ -0.2
CEACAM1-202ENST00000344391 CLEC18BQ6UXF7 455 aa13.78□□□□□ -0.2
CEACAM1-202ENST00000344391 CLEC18CQ8NCF0 446 aa13.78□□□□□ -0.2
CEACAM1-202ENST00000344391 NEDD4LQ96PU5 975 aa13.78□□□□□ -0.2
CEACAM1-202ENST00000344391 WDR13Q9H1Z4 485 aa13.78□□□□□ -0.2
CEACAM1-202ENST00000344391 PLEKHJ1Q9NW61 149 aa13.78□□□□□ -0.2
CEACAM1-202ENST00000344391 MTFP1Q9UDX5 166 aa13.78□□□□□ -0.2
CEACAM1-202ENST00000344391 SERPINE3A8MV23 424 aa13.77□□□□□ -0.21
CEACAM1-202ENST00000344391 SRRM5B3KS81 715 aa13.77□□□□□ -0.21
CEACAM1-202ENST00000344391 WNT9BO14905 357 aa13.77□□□□□ -0.21
CEACAM1-202ENST00000344391 RBBP9O75884 186 aa13.77□□□□□ -0.21
CEACAM1-202ENST00000344391 LPLP06858 475 aa13.77□□□□□ -0.21
CEACAM1-202ENST00000344391 PLA2G2AP14555 144 aa13.77□□□□□ -0.21
CEACAM1-202ENST00000344391 FUT3P21217 361 aa13.77□□□□□ -0.21
CEACAM1-202ENST00000344391 GLRA1P23415 457 aa13.77□□□□□ -0.21
CEACAM1-202ENST00000344391 DUSP1P28562 367 aa13.77□□□□□ -0.21
CEACAM1-202ENST00000344391 INPP1P49441 399 aa13.77□□□□□ -0.21
CEACAM1-202ENST00000344391 GMFBP60983 142 aa13.77□□□□□ -0.21
CEACAM1-202ENST00000344391 HOXA4Q00056 320 aaPredicted RBP13.77□□□□□ -0.21
CEACAM1-202ENST00000344391 ZNF146Q15072 292 aa13.77□□□□□ -0.21
CEACAM1-202ENST00000344391 PCGF3Q3KNV8 242 aa13.77□□□□□ -0.21
CEACAM1-202ENST00000344391 ACP7Q6ZNF0 438 aa13.77□□□□□ -0.21
CEACAM1-202ENST00000344391 GCSAMQ8N6F7 178 aa13.77□□□□□ -0.21
CEACAM1-202ENST00000344391 SETD6Q8TBK2 473 aa13.77□□□□□ -0.21
CEACAM1-202ENST00000344391 Q8TCH9 128 aa13.77□□□□□ -0.21
CEACAM1-202ENST00000344391 NUDCD2Q8WVJ2 157 aa13.77□□□□□ -0.21
CEACAM1-202ENST00000344391 EGLN1Q9GZT9 426 aa13.77□□□□□ -0.21
CEACAM1-202ENST00000344391 RCC2Q9P258 522 aaKnown RBP13.77□□□□□ -0.21
CEACAM1-202ENST00000344391 RAI1Q7Z5J4 1906 aaPredicted RBP13.77□□□□□ -0.21
CEACAM1-202ENST00000344391 FAM221AA4D161 298 aa13.76□□□□□ -0.21
CEACAM1-202ENST00000344391 PLA2G10O15496 165 aa13.76□□□□□ -0.21
CEACAM1-202ENST00000344391 SSX5O60225 188 aa13.76□□□□□ -0.21
CEACAM1-202ENST00000344391 CA11O75493 328 aa13.76□□□□□ -0.21
CEACAM1-202ENST00000344391 LHBP01229 141 aa13.76□□□□□ -0.21
CEACAM1-202ENST00000344391 DANCRP0C864 163 aa13.76□□□□□ -0.21
CEACAM1-202ENST00000344391 RBMXP38159 391 aaKnown RBP13.76□□□□□ -0.21
CEACAM1-202ENST00000344391 DEFA1P59665 94 aa13.76□□□□□ -0.21
CEACAM1-202ENST00000344391 DEFA3P59666 94 aa13.76□□□□□ -0.21
CEACAM1-202ENST00000344391 ASAH1Q13510 395 aa13.76□□□□□ -0.21
CEACAM1-202ENST00000344391 RGS21Q2M5E4 152 aa13.76□□□□□ -0.21
CEACAM1-202ENST00000344391 ZNF57Q68EA5 555 aaPredicted RBP13.76□□□□□ -0.21
CEACAM1-202ENST00000344391 POC5Q8NA72 575 aa13.76□□□□□ -0.21
CEACAM1-202ENST00000344391 SULT4A1Q9BR01 284 aa13.76□□□□□ -0.21
CEACAM1-202ENST00000344391 FAAP24Q9BTP7 215 aa13.76□□□□□ -0.21
CEACAM1-202ENST00000344391 IFT22Q9H7X7 185 aa13.76□□□□□ -0.21
CEACAM1-202ENST00000344391 CBLN4Q9NTU7 201 aa13.76□□□□□ -0.21
CEACAM1-202ENST00000344391 DECR2Q9NUI1 292 aa13.76□□□□□ -0.21
CEACAM1-202ENST00000344391 FAIMQ9NVQ4 179 aa13.76□□□□□ -0.21
CEACAM1-202ENST00000344391 RASL12Q9NYN1 266 aa13.76□□□□□ -0.21
CEACAM1-202ENST00000344391 PPP1R3CQ9UQK1 317 aa13.76□□□□□ -0.21
CEACAM1-202ENST00000344391 LINC00854A0A1B0GVQ3 168 aa13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 MEIS3P1A6NDR6 274 aa13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 H3BUI4 141 aa13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 TPD52L2O43399 206 aaKnown RBP13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 CD8AP01732 235 aa13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 EGR1P18146 543 aa13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 PPOXP50336 477 aa13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 GNG2P59768 71 aa13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 SSBP1Q04837 148 aaKnown RBP13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 IKZF1Q13422 519 aa13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 SPIN3Q5JUX0 258 aa13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 ATAD3CQ5T2N8 411 aa13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 AGAP6Q5VW22 663 aa13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 C11orf71Q6IPW1 123 aa13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 Q6P435 159 aa13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 FIP1L1Q6UN15 594 aaKnown RBP13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 DTX2Q86UW9 622 aa13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 TOMM5Q8N4H5 51 aa13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 SAP30LQ9HAJ7 183 aa13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 RNF7Q9UBF6 113 aa13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 FBXO9Q9UK97 447 aaPredicted RBP13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 PLEKHA6Q9Y2H5 1048 aa13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 DCHS2Q6V1P9 2916 aa13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 TANC2Q9HCD6 1990 aa13.75□□□□□ -0.21
CEACAM1-202ENST00000344391 SOD3P08294 240 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms