RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 RUNX1Q01196 453 aa10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 FAHD2BQ6P2I3 314 aaPredicted RBP10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 LFNGQ8NES3 379 aa10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 ADIPOR1Q96A54 375 aa10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 FAHD2AQ96GK7 314 aa10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 PATZ1Q9HBE1 687 aaKnown RBP10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 TUBG2Q9NRH3 451 aa10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 COL4A6Q14031 1691 aa10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 ZNF732B4DXR9 585 aa10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 C5orf67F2Z3F1 127 aa10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 GLULP15104 373 aa10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 MST1P26927 711 aa10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 GSK3AP49840 483 aa10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 LINC00114Q6XXX2 140 aa10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 HOGA1Q86XE5 327 aa10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 FOXB1Q99853 325 aa10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 MFRPQ9BY79 579 aa10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 NAA60Q9H7X0 242 aa10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 SLC2A9Q9NRM0 540 aa10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 WNT16Q9UBV4 365 aa10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 FANCMQ8IYD8 2048 aa10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 ZNF814B7Z6K7 855 aa10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 TSPAN2O60636 221 aa10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 METTL15P1P0C7V9 234 aa10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 FUT3P21217 361 aa10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 SULT1A1P50225 295 aa10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 SRPXP78539 464 aa10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 ADPRHL1Q8NDY3 354 aa10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 OR1F12Q8NHA8 337 aa10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 SAT2Q96F10 170 aaPredicted RBP10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 GHRLQ9UBU3 117 aa10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 MKI67P46013 3256 aaKnown RBP10.92□□□□□ -0.66
SNRNP48-201ENST00000342415 DEGS1O15121 323 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 CYB561P49447 251 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 HBG1P69891 147 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 HBG2P69892 147 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 RNF212Q495C1 297 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 ZNF787Q6DD87 383 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 RABEPKQ7Z6M1 372 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 IP6K3Q96PC2 410 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 DNAJB11Q9UBS4 358 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 ERRFI1Q9UJM3 462 aaPredicted RBP10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 CYTIPO60759 359 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 KRASP01116 189 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 GABRA2P47869 451 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 MNX1P50219 401 aaPredicted RBP10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 PLAURQ03405 335 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 VHLLQ6RSH7 139 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 FLVCR1-AS1Q8TAF5 88 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 AQP3Q92482 292 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 SLC26A1Q9H2B4 701 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 LHFPL6Q9Y693 200 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 ABCA1O95477 2261 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 EIF2S3P41091 472 aaKnown RBP10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 C1orf100Q5SVJ3 147 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 DHRS11Q6UWP2 260 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 RBMS3Q6XE24 437 aaKnown RBP10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 SMIM7Q9BQ49 75 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 SERTAD4Q9NUC0 356 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 PLXNA3P51805 1871 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 DHRS7CA6NNS2 312 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 PLAC9Q5JTB6 97 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 CDCP2Q5VXM1 449 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 ZNF519Q8TB69 540 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 TMEM37Q8WXS4 190 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 KCNK17Q96T54 332 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 SMOC1Q9H4F8 434 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 LAMP3Q9UQV4 416 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 STRAPQ9Y3F4 350 aaKnown RBP10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 MTCH2Q9Y6C9 303 aa10.91□□□□□ -0.66
SNRNP48-201ENST00000342415 NKX2-6A6NCS4 301 aa10.9□□□□□ -0.66
SNRNP48-201ENST00000342415 ZNF587BE7ETH6 402 aa10.9□□□□□ -0.66
SNRNP48-201ENST00000342415 H7BYZ3 331 aa10.9□□□□□ -0.66
SNRNP48-201ENST00000342415 HOXA1P49639 335 aaPredicted RBP10.9□□□□□ -0.66
SNRNP48-201ENST00000342415 MPV17LQ2QL34 196 aa10.9□□□□□ -0.66
SNRNP48-201ENST00000342415 PDLIM3Q53GG5 364 aaPredicted RBP10.9□□□□□ -0.66
SNRNP48-201ENST00000342415 CXorf67Q86X51 503 aaPredicted RBP10.9□□□□□ -0.66
SNRNP48-201ENST00000342415 C1orf87Q8N0U7 546 aa10.9□□□□□ -0.66
SNRNP48-201ENST00000342415 KIR2DS1A0A191URI9 304 aa10.9□□□□□ -0.66
SNRNP48-201ENST00000342415 C3orf85A0A1B0GTC6 90 aa10.9□□□□□ -0.66
SNRNP48-201ENST00000342415 A0A1W2PQD3 144 aa10.9□□□□□ -0.66
SNRNP48-201ENST00000342415 RAB5AP20339 215 aa10.9□□□□□ -0.66
SNRNP48-201ENST00000342415 KIR2DS4P43632 304 aa10.9□□□□□ -0.66
SNRNP48-201ENST00000342415 SUMO3P55854 103 aaPredicted RBP10.9□□□□□ -0.66
SNRNP48-201ENST00000342415 ZNF154Q13106 437 aa10.9□□□□□ -0.66
SNRNP48-201ENST00000342415 SMAD4Q13485 552 aaKnown RBP10.9□□□□□ -0.66
SNRNP48-201ENST00000342415 KIR2DS1Q14954 304 aa10.9□□□□□ -0.66
SNRNP48-201ENST00000342415 SPINK9Q5DT21 86 aa10.9□□□□□ -0.66
SNRNP48-201ENST00000342415 TEX30Q5JUR7 227 aa10.9□□□□□ -0.66
SNRNP48-201ENST00000342415 LHFPL2Q6ZUX7 228 aa10.9□□□□□ -0.66
SNRNP48-201ENST00000342415 RNF144BQ7Z419 303 aa10.9□□□□□ -0.66
SNRNP48-201ENST00000342415 DMBX1Q8NFW5 382 aa10.9□□□□□ -0.66
SNRNP48-201ENST00000342415 OR6X1Q8NH79 312 aa10.9□□□□□ -0.66
SNRNP48-201ENST00000342415 SCARF2Q96GP6 870 aaPredicted RBP10.9□□□□□ -0.66
SNRNP48-201ENST00000342415 GNG12Q9UBI6 72 aa10.9□□□□□ -0.66
SNRNP48-201ENST00000342415 CCDC187A0A096LP49 1063 aa10.9□□□□□ -0.67
SNRNP48-201ENST00000342415 PPP5D1E7EU14 171 aa10.9□□□□□ -0.67
SNRNP48-201ENST00000342415 IGHV3-13P01766 116 aa10.9□□□□□ -0.67
SNRNP48-201ENST00000342415 IGHV3-7P01780 117 aa10.9□□□□□ -0.67
SNRNP48-201ENST00000342415 CCL3P10147 92 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms